Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 1
- cytosol 3
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH30746 | Soybean | cytosol | 6.89 | 77.1 |
| CDX97269 | Canola | cytosol | 3.34 | 74.24 |
| CDY50376 | Canola | cytosol | 33.99 | 71.45 |
| PGSC0003DMT400029640 | Potato | cytosol | 46.28 | 68.21 |
| CDX97270 | Canola | cytosol | 18.77 | 62.64 |
| KRH43000 | Soybean | nucleus | 47.24 | 58.4 |
| KRH59116 | Soybean | nucleus | 49.35 | 58.31 |
| CDX91288 | Canola | cytosol | 30.72 | 57.25 |
| Bra018546.1-P | Field mustard | mitochondrion | 34.13 | 56.05 |
| GSMUA_Achr9P31010_001 | Banana | cytosol | 37.82 | 56.02 |
| Solyc09g074940.1.1 | Tomato | plastid | 50.44 | 52.67 |
| GSMUA_Achr9P31000_001 | Banana | cytosol | 38.5 | 51.65 |
| Zm00001d010852_P002 | Maize | plastid | 41.57 | 50.46 |
| Zm00001d035812_P003 | Maize | plastid | 43.0 | 48.42 |
| VIT_05s0020g01290.t01 | Wine grape | cytosol | 42.59 | 48.33 |
| OQU77419 | Sorghum | nucleus | 43.41 | 47.64 |
| AT4G02510.4 | Thale cress | nucleus | 48.81 | 47.57 |
| Os05t0151400-01 | Rice | plastid | 42.18 | 47.32 |
| Bra036261.1-P | Field mustard | nucleus | 48.05 | 45.3 |
| HORVU1Hr1G021840.9 | Barley | nucleus | 43.75 | 44.95 |
| TraesCS1A01G093900.3 | Wheat | cytosol, nucleus, plastid | 43.41 | 44.66 |
| TraesCS1D01G102500.3 | Wheat | cytosol, nucleus, plastid | 43.41 | 44.63 |
| TraesCS1B01G122000.4 | Wheat | cytosol, nucleus, plastid | 43.55 | 44.46 |
| OQU90674 | Sorghum | nucleus | 27.71 | 43.84 |
| GSMUA_Achr6P20360_001 | Banana | cytosol | 31.19 | 40.41 |
| VIT_11s0118g00260.t01 | Wine grape | cytosol, mitochondrion, plastid | 21.43 | 39.35 |
| HORVU5Hr1G117690.19 | Barley | plastid | 30.03 | 37.67 |
| Zm00001d034755_P001 | Maize | cytosol | 29.49 | 37.44 |
| Zm00001d012893_P002 | Maize | cytosol, plastid | 29.08 | 37.43 |
| Os03t0835100-00 | Rice | cytosol, plastid | 30.65 | 37.23 |
| TraesCS4A01G358400.1 | Wheat | plastid | 29.97 | 36.83 |
| TraesCS5D01G514500.1 | Wheat | cytosol, plastid | 30.1 | 36.48 |
| TraesCS5B01G514000.1 | Wheat | cytosol | 30.03 | 36.1 |
| VIT_03s0038g02070.t01 | Wine grape | nucleus | 29.69 | 34.12 |
| VIT_16s0039g02670.t01 | Wine grape | cytosol | 6.96 | 33.12 |
| VIT_02s0109g00360.t01 | Wine grape | cytosol | 6.89 | 32.58 |
| Os01t0356800-00 | Rice | plastid | 21.91 | 6.01 |
Protein Annotations
| EntrezGene:100243553 | wikigene:100243553 | MapMan:23.1.2.2 | Gene3D:3.40.50.300 | ProteinID:CCB59950 | ProteinID:CCB59950.1 |
| ncoils:Coil | UniProt:F6HZ35 | EMBL:FN596502 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004871 | GO:GO:0004888 | GO:GO:0004930 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005525 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006810 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007186 | GO:GO:0008150 | GO:GO:0009507 | GO:GO:0009536 |
| GO:GO:0009707 | GO:GO:0009941 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 |
| GO:GO:0016817 | GO:GO:0038023 | GO:GO:0043024 | GO:GO:0045036 | GO:GO:0045037 | GO:GO:0051087 |
| GO:GO:0061927 | InterPro:G_AIG1 | InterPro:IPR006703 | EntrezGene:LOC100243553 | wikigene:LOC100243553 | InterPro:P-loop_NTPase |
| PFAM:PF04548 | PFAM:PF11886 | PFscan:PS51720 | PANTHER:PTHR10903 | PANTHER:PTHR10903:SF39 | SUPFAM:SSF52540 |
| TIGR:TC53115 | TIGR:TC54739 | TIGRFAMs:TIGR00993 | InterPro:TOC159_MAD | InterPro:Toc86_159 | UniParc:UPI00019838A4 |
| ArrayExpress:VIT_07s0005g00180 | EnsemblPlantsGene:VIT_07s0005g00180 | EnsemblPlants:VIT_07s0005g00180.t01 | unigene:Vvi.4042 | RefSeq:XP_002267274 | RefSeq:XP_002267274.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr7:-:2951320..2956180
Molecular Weight (calculated)
157295.0 Da
IEP (calculated)
4.331
GRAVY (calculated)
-0.517
Length
1465 amino acids
Sequence
(BLAST)
(BLAST)
0001: MESKAFVPLS GTEMTSQPSN SSGSFSSPPI RASPSYGFDT EAVRKKDVLE INGKSSSSTS SSSGASSDGE SENGGFVSGE EDFETASEPI MEDPDEEIVE
0101: KGIGGEGIDS PFVGSSEFFV PKMVMPVARV STDDEEEEGG DDVVGGPRAR VLGGEEETGE TESIGVGADG SKRIGLDPGV ENCENEGKGV SVQMDSMEKP
0201: VVRELVEGSS IGGAAQGNSI EALGADNGDS TFETPKFDDR IKEDAFLGGG TDLVGPLIAE AAAAADNKPV ATESVNIARE GDSVVDAIHV SVSGSGSAIV
0301: GDEGFRQNAD GESDQVSPLI AEPADNKFLE EDGVKLNGGG DSVVEAMHTN FSGSGPTIAG DEEENKDSEI EGKEMMVDDS VKLDKRFDQI SGDLEEPVNS
0401: KSVGVDTDFD KSIKPVTNLN VETSELGEKT DGGVEKDQEL NVGAVVRGTV IVDNQDGTKG DACTDKSETA GLINNKEKQE TETKPEADSE ATRNEPITKI
0501: AADGVQFVYS GKEAVGNEDQ AVENGAESTT ENPTLESKQL ENNLTHVNAQ GAELENVVSG KSESPESADL SSVLNPAIKL DETNHHSDED DEEGEIEGSV
0601: TDEESKGMVF EGSEAAKHFL EELEQVSGGG SHSGAESSRD HSQRIDGQIV SDSDEEVDTD EEGDGKELFD SAALAALLKA ATSASSDSGS ITITSPDGSR
0701: LFSVDRPAGL GSANRSLKPA PRPNRSNLFT PSNLAIGGDS ENTLSEEDKR KQEKIQLIRV KFLRLVQRLG HSPEDSIVGQ VLYRLALLVG RQTGEEFSLD
0801: TAKRRAMQLE AEGKDDLNFS LNILVLGKSG VGKSATINSI FGEQKALINA FEPATTTVRE IIGTIDGVKI RVFDTPGLKS SFLEQGVNRK ILSSIQKFTK
0901: KCPPDIVLYV DRLDAQTRDL NDLPLLRTIT SSLGPSIWRS AIVTLTHGAS APPDGPSGAP LSYETYVSQR SHVVQQSIGQ AVGDLRLMNP SLMNPVSLVE
1001: NHPSCRKNRD GQKVLPNGQS WRPQLLLLSY SMKILSEASS LSKPQDPFDH RKLFGFRVRA PPLPYLLSWL LQSRTHPKLS AEQGGDNGDS DIDLDDLSDC
1101: EQEEDEDEYD QLPPFKPLRK SQIAKLSKEQ RKAYFEEYDY RVKLLQKQQW REELKKMREI KKKGKVASDD YGYLGEDGDQ DNGGPAAVPV PLPDMVLPPS
1201: FDCDNPAYRY RFLEPTSQFL ARPVLDTHGW DHDCGYDGVN LEQSLAILGQ FPAAVSVQVT KDKKEFNIHL DSSAAAKHGE NGSSMAGFDI QNIGKQLAYI
1301: LRGETKFKIL KKNKTAAGFS VTFLGENVAT GFKVEDQFTL GKRLVLAGST GTVRCQGDAA YGANLEVRLR EADFPIGQDQ STLGLSLVKW RGDLALGANL
1401: QSQFSIGRSS KMAVRVGLNN KLSGQITVKT SSSEQLQIAL VGIIPVVMAI YKAIWPGVSD NYSIY
0101: KGIGGEGIDS PFVGSSEFFV PKMVMPVARV STDDEEEEGG DDVVGGPRAR VLGGEEETGE TESIGVGADG SKRIGLDPGV ENCENEGKGV SVQMDSMEKP
0201: VVRELVEGSS IGGAAQGNSI EALGADNGDS TFETPKFDDR IKEDAFLGGG TDLVGPLIAE AAAAADNKPV ATESVNIARE GDSVVDAIHV SVSGSGSAIV
0301: GDEGFRQNAD GESDQVSPLI AEPADNKFLE EDGVKLNGGG DSVVEAMHTN FSGSGPTIAG DEEENKDSEI EGKEMMVDDS VKLDKRFDQI SGDLEEPVNS
0401: KSVGVDTDFD KSIKPVTNLN VETSELGEKT DGGVEKDQEL NVGAVVRGTV IVDNQDGTKG DACTDKSETA GLINNKEKQE TETKPEADSE ATRNEPITKI
0501: AADGVQFVYS GKEAVGNEDQ AVENGAESTT ENPTLESKQL ENNLTHVNAQ GAELENVVSG KSESPESADL SSVLNPAIKL DETNHHSDED DEEGEIEGSV
0601: TDEESKGMVF EGSEAAKHFL EELEQVSGGG SHSGAESSRD HSQRIDGQIV SDSDEEVDTD EEGDGKELFD SAALAALLKA ATSASSDSGS ITITSPDGSR
0701: LFSVDRPAGL GSANRSLKPA PRPNRSNLFT PSNLAIGGDS ENTLSEEDKR KQEKIQLIRV KFLRLVQRLG HSPEDSIVGQ VLYRLALLVG RQTGEEFSLD
0801: TAKRRAMQLE AEGKDDLNFS LNILVLGKSG VGKSATINSI FGEQKALINA FEPATTTVRE IIGTIDGVKI RVFDTPGLKS SFLEQGVNRK ILSSIQKFTK
0901: KCPPDIVLYV DRLDAQTRDL NDLPLLRTIT SSLGPSIWRS AIVTLTHGAS APPDGPSGAP LSYETYVSQR SHVVQQSIGQ AVGDLRLMNP SLMNPVSLVE
1001: NHPSCRKNRD GQKVLPNGQS WRPQLLLLSY SMKILSEASS LSKPQDPFDH RKLFGFRVRA PPLPYLLSWL LQSRTHPKLS AEQGGDNGDS DIDLDDLSDC
1101: EQEEDEDEYD QLPPFKPLRK SQIAKLSKEQ RKAYFEEYDY RVKLLQKQQW REELKKMREI KKKGKVASDD YGYLGEDGDQ DNGGPAAVPV PLPDMVLPPS
1201: FDCDNPAYRY RFLEPTSQFL ARPVLDTHGW DHDCGYDGVN LEQSLAILGQ FPAAVSVQVT KDKKEFNIHL DSSAAAKHGE NGSSMAGFDI QNIGKQLAYI
1301: LRGETKFKIL KKNKTAAGFS VTFLGENVAT GFKVEDQFTL GKRLVLAGST GTVRCQGDAA YGANLEVRLR EADFPIGQDQ STLGLSLVKW RGDLALGANL
1401: QSQFSIGRSS KMAVRVGLNN KLSGQITVKT SSSEQLQIAL VGIIPVVMAI YKAIWPGVSD NYSIY
0001: MDSKSVTPEP TNPFYASSGQ SGKTYASVVA AAAAAAADKE DGGAVSSAKE LDSSSEAVSG NSDKVGADDL SDSEKEKPNL VGDGKVSDEV DGSLKEDSTT
0101: PEATPKPEVV SGETIGVDDV SSLSPKPEAV SDGVGVVEEN KKVKEDVEDI KDDGESKIEN GSVDVDVKQA STDGESESKV KDVEEEDVGT KKDDEGESEL
0201: GGKVDVDDKS DNVIEEEGVE LTDKGDVIVN SSPVESVHVD VAKPGVVVVG DAEGSEELKI NADAETLEVA NKFDQIGDDD SGEFEPVSDK AIEEVEEKFT
0301: SESDSIADSS KLESVDTSAV EPEVVAAESG SEPKDVEKAN GLEKGMTYAE VIKAASAVAD NGTKEEESVL GGIVDDAEEG VKLNNKGDFV VDSSAIEAVN
0401: VDVAKPGVVV VGDVEVSEVL ETDGNIPDVH NKFDPIGQGE GGEVELESDK ATEEGGGKLV SEGDSMVDSS VVDSVDADIN VAEPGVVVVG AAKEAVIKED
0501: DKDDEVDKTI SNIEEPDDLT AAYDGNFELA VKEISEAAKV EPDEPKVGVE VEELPVSESL KVGSVDAEED SIPAAESQFE VRKVVEGDSA EEDENKLPVE
0601: DIVSSREFSF GGKEVDQEPS GEGVTRVDGS ESEEETEEMI FGSSEAAKQF LAELEKASSG IEAHSDEANI SNNMSDRIDG QIVTDSDEDV DTEDEGEEKM
0701: FDTAALAALL KAATGGGSSE GGNFTITSQD GTKLFSMDRP AGLSSSLRPL KPAAAPRANR SNIFSNSNVT MADETEINLS EEEKQKLEKL QSLRVKFLRL
0801: LQRLGHSAED SIAAQVLYRL ALLAGRQAGQ LFSLDAAKKK AVESEAEGNE ELIFSLNILV LGKAGVGKSA TINSILGNQI ASIDAFGLST TSVREISGTV
0901: NGVKITFIDT PGLKSAAMDQ STNAKMLSSV KKVMKKCPPD IVLYVDRLDT QTRDLNNLPL LRTITASLGT SIWKNAIVTL THAASAPPDG PSGTPLSYDV
1001: FVAQCSHIVQ QSIGQAVGDL RLMNPSLMNP VSLVENHPLC RKNREGVKVL PNGQTWRSQL LLLCYSLKVL SETNSLLRPQ EPLDHRKVFG FRVRSPPLPY
1101: LLSWLLQSRA HPKLPGDQGG DSVDSDIEID DVSDSEQEDG EDDEYDQLPP FKPLRKTQLA KLSNEQRKAY FEEYDYRVKL LQKKQWREEL KRMKEMKKNG
1201: KKLGESEFGY PGEEDDPENG APAAVPVPLP DMVLPPSFDS DNSAYRYRYL EPTSQLLTRP VLDTHGWDHD CGYDGVNAEH SLALASRFPA TATVQVTKDK
1301: KEFNIHLDSS VSAKHGENGS TMAGFDIQNV GKQLAYVVRG ETKFKNLRKN KTTVGGSVTF LGENIATGVK LEDQIALGKR LVLVGSTGTM RSQGDSAYGA
1401: NLEVRLREAD FPIGQDQSSF GLSLVKWRGD LALGANLQSQ VSVGRNSKIA LRAGLNNKMS GQITVRTSSS DQLQIALTAI LPIAMSIYKS IRPEATNDKY
1501: SMY
0101: PEATPKPEVV SGETIGVDDV SSLSPKPEAV SDGVGVVEEN KKVKEDVEDI KDDGESKIEN GSVDVDVKQA STDGESESKV KDVEEEDVGT KKDDEGESEL
0201: GGKVDVDDKS DNVIEEEGVE LTDKGDVIVN SSPVESVHVD VAKPGVVVVG DAEGSEELKI NADAETLEVA NKFDQIGDDD SGEFEPVSDK AIEEVEEKFT
0301: SESDSIADSS KLESVDTSAV EPEVVAAESG SEPKDVEKAN GLEKGMTYAE VIKAASAVAD NGTKEEESVL GGIVDDAEEG VKLNNKGDFV VDSSAIEAVN
0401: VDVAKPGVVV VGDVEVSEVL ETDGNIPDVH NKFDPIGQGE GGEVELESDK ATEEGGGKLV SEGDSMVDSS VVDSVDADIN VAEPGVVVVG AAKEAVIKED
0501: DKDDEVDKTI SNIEEPDDLT AAYDGNFELA VKEISEAAKV EPDEPKVGVE VEELPVSESL KVGSVDAEED SIPAAESQFE VRKVVEGDSA EEDENKLPVE
0601: DIVSSREFSF GGKEVDQEPS GEGVTRVDGS ESEEETEEMI FGSSEAAKQF LAELEKASSG IEAHSDEANI SNNMSDRIDG QIVTDSDEDV DTEDEGEEKM
0701: FDTAALAALL KAATGGGSSE GGNFTITSQD GTKLFSMDRP AGLSSSLRPL KPAAAPRANR SNIFSNSNVT MADETEINLS EEEKQKLEKL QSLRVKFLRL
0801: LQRLGHSAED SIAAQVLYRL ALLAGRQAGQ LFSLDAAKKK AVESEAEGNE ELIFSLNILV LGKAGVGKSA TINSILGNQI ASIDAFGLST TSVREISGTV
0901: NGVKITFIDT PGLKSAAMDQ STNAKMLSSV KKVMKKCPPD IVLYVDRLDT QTRDLNNLPL LRTITASLGT SIWKNAIVTL THAASAPPDG PSGTPLSYDV
1001: FVAQCSHIVQ QSIGQAVGDL RLMNPSLMNP VSLVENHPLC RKNREGVKVL PNGQTWRSQL LLLCYSLKVL SETNSLLRPQ EPLDHRKVFG FRVRSPPLPY
1101: LLSWLLQSRA HPKLPGDQGG DSVDSDIEID DVSDSEQEDG EDDEYDQLPP FKPLRKTQLA KLSNEQRKAY FEEYDYRVKL LQKKQWREEL KRMKEMKKNG
1201: KKLGESEFGY PGEEDDPENG APAAVPVPLP DMVLPPSFDS DNSAYRYRYL EPTSQLLTRP VLDTHGWDHD CGYDGVNAEH SLALASRFPA TATVQVTKDK
1301: KEFNIHLDSS VSAKHGENGS TMAGFDIQNV GKQLAYVVRG ETKFKNLRKN KTTVGGSVTF LGENIATGVK LEDQIALGKR LVLVGSTGTM RSQGDSAYGA
1401: NLEVRLREAD FPIGQDQSSF GLSLVKWRGD LALGANLQSQ VSVGRNSKIA LRAGLNNKMS GQITVRTSSS DQLQIALTAI LPIAMSIYKS IRPEATNDKY
1501: SMY
Arabidopsis Description
TOC159Translocase of chloroplast 159, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O81283]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.