Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
endoplasmic reticulum: 27224218 mitochondrion: 28499913 |
msms PMID:
21132161
doi
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
msms PMID:
28499913
doi
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH30746 | Soybean | cytosol | 10.08 | 95.42 |
| KRH43000 | Soybean | nucleus | 84.6 | 88.52 |
| CDY50376 | Canola | cytosol | 38.95 | 69.3 |
| CDX97269 | Canola | cytosol | 3.63 | 68.18 |
| PGSC0003DMT400029640 | Potato | cytosol | 52.18 | 65.09 |
| CDX97270 | Canola | cytosol | 22.1 | 62.41 |
| CDX91288 | Canola | cytosol | 35.0 | 55.22 |
| Bra018546.1-P | Field mustard | mitochondrion | 38.47 | 53.48 |
| GSMUA_Achr9P31010_001 | Banana | cytosol | 39.92 | 50.05 |
| VIT_07s0005g00180.t01 | Wine grape | plastid | 58.31 | 49.35 |
| Solyc09g074940.1.1 | Tomato | plastid | 54.84 | 48.47 |
| Zm00001d010852_P002 | Maize | plastid | 44.92 | 46.15 |
| GSMUA_Achr9P31000_001 | Banana | cytosol | 40.24 | 45.7 |
| AT4G02510.4 | Thale cress | nucleus | 53.63 | 44.24 |
| Os05t0151400-01 | Rice | plastid | 46.45 | 44.1 |
| Zm00001d035812_P003 | Maize | plastid | 46.21 | 44.04 |
| OQU77419 | Sorghum | nucleus | 46.53 | 43.22 |
| OQU90674 | Sorghum | nucleus | 31.94 | 42.76 |
| Bra036261.1-P | Field mustard | nucleus | 52.66 | 42.02 |
| TraesCS1A01G093900.3 | Wheat | cytosol, nucleus, plastid | 47.02 | 40.94 |
| TraesCS1D01G102500.3 | Wheat | cytosol, nucleus, plastid | 46.85 | 40.77 |
| HORVU1Hr1G021840.9 | Barley | nucleus | 46.85 | 40.74 |
| TraesCS1B01G122000.4 | Wheat | cytosol, nucleus, plastid | 47.1 | 40.7 |
| GSMUA_Achr6P20360_001 | Banana | cytosol | 33.71 | 36.96 |
| KRH03616 | Soybean | mitochondrion | 23.71 | 36.93 |
| KRH20190 | Soybean | cytosol | 23.47 | 36.6 |
| Os03t0835100-00 | Rice | cytosol, plastid | 35.56 | 36.57 |
| Zm00001d034755_P001 | Maize | cytosol | 33.63 | 36.14 |
| HORVU5Hr1G117690.19 | Barley | plastid | 34.03 | 36.13 |
| Zm00001d012893_P002 | Maize | cytosol, plastid | 32.66 | 35.59 |
| TraesCS4A01G358400.1 | Wheat | plastid | 34.03 | 35.4 |
| TraesCS5D01G514500.1 | Wheat | cytosol, plastid | 34.03 | 34.9 |
| TraesCS5B01G514000.1 | Wheat | cytosol | 34.19 | 34.78 |
| KRH24252 | Soybean | mitochondrion | 32.98 | 33.77 |
| KRG94982 | Soybean | cytosol | 7.82 | 31.09 |
| KRH64901 | Soybean | cytosol | 7.66 | 30.35 |
| KRH29257 | Soybean | endoplasmic reticulum | 33.15 | 30.07 |
| KRH02257 | Soybean | cytosol | 19.35 | 27.91 |
| Os01t0356800-00 | Rice | plastid | 23.87 | 5.54 |
Protein Annotations
| EntrezGene:100777600 | MapMan:23.1.2.2 | Gene3D:3.40.50.300 | EMBL:ACUP02003299 | ncoils:Coil | EnsemblPlantsGene:GLYMA_05G166300 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 |
| GO:GO:0016817 | InterPro:G_AIG1 | InterPro:IPR006703 | UniProt:K7KQN4 | EnsemblPlants:KRH59116 | ProteinID:KRH59116 |
| ProteinID:KRH59116.1 | InterPro:P-loop_NTPase | PFAM:PF04548 | PFAM:PF11886 | PFscan:PS51720 | PANTHER:PTHR10903 |
| PANTHER:PTHR10903:SF39 | SUPFAM:SSF52540 | TIGRFAMs:TIGR00993 | InterPro:TOC159_MAD | InterPro:Toc86_159 | UniParc:UPI000233A0CE |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr5:+:35680139..35684403
Molecular Weight (calculated)
133395.0 Da
IEP (calculated)
4.223
GRAVY (calculated)
-0.505
Length
1240 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDSSSSSDPS LPQTSVLLSD QSPSLPPASD SENHHGFVSA EDGALEAQPS RPLLVNSSEP VLDSPPDDAH RPVAKVSGDD DEDGSVVEGA DDVVEVANDV
0101: VLEEGGEKEE SGQAMKEGDF SDSNEVFVEA SGGDDDIKEI QSGVVAVENG VELSGTDKGF EAAAVELNEE EAKEKEVEEK VNDGGTDNSD SVVDEKSEGV
0201: DVEKDDGGGV DAVVDSVEVN VLGSGVAVVG DELGVDESEI KGLEEPESRG VSLDNGFEPI EKGEEEVVDK LVDGGDGQSG AEGVVVGGDD VSGENGDDGD
0301: GLKSDIVVPP EEGGGGSEFV EKDEVNMEGD VVEGENGSRV EEEVGHHGDR EIDDSELDGK IGSHVEEVEE IGANGDREIN GSVSDEKGDG VVFGSTDAAN
0401: KFLEDLELQQ SRASGSSRDD GQIVSDSDEE EETDDEGDGK ELFDTATLAA LLKAASGADQ DGGSITITSQ DGSRLFSVER PAGLGSSLSS GKPAMRQTRP
0501: SLFTPSISRA SAISDSNLSE EEKKKLEKLH EIRVKYLRLV HRLGFTTEES IAAQVLYRMT HVAGRQSGQM FSVESAKETA SQLEAEARDN FDFSVNILVL
0601: GKAGVGKSAT INSIFGETKT SINACGPATT AVTEIVGVVD GVKIRIFDTP GLKSSAFEQN FNTKVLSAVK KLTKKSPPDI VLYVDRLDLQ TRDMNDLPML
0701: RSITSVLGSS IWRNVIVTLT HAASAPPDGP SGAPLSYDVF VAQRSHIVQQ TIGQAVGDLR LMNPSLMNPV SLVENHPSCR KNRDGQKVLP NGQSWRPLLL
0801: LLCYSMKILS EASNVSKTQE SPFDQRRLFG FRPRSPPLPY LLSWLLQTRT YPKLPADQGG ADNGDSDIEM ADLSDSDLDE DEDEYDQLPP FKPMKKSQVA
0901: KLTKEQQKAY FEEYDYRVKL LQKKQWREEL RRMREMKKKG NTKENDYGYT EEDDQENGSP AAVPVPLPDM ALPPSFDSDN PAYRYRFLEP TSQLLTRPVL
1001: DSHGWDHDCG YDGVNIEQSL AIINKFPAAV TVQVTKDKKD FSMHLDSSVA AKLGENGSAM AGFDIQNIGK QLAYIVRGET KLKNFKRNKT SAGVSVTFFG
1101: ENVSTGLKVE DQIAVGKRVV LVGSTGVVKS QTDSAYGANV EVRLREADFP IGQDQSSLSL SLVKWRGDLA LGANLQSQFS VGRGYKVAVR AGLNNKLSGQ
1201: ISVRTSSSDQ LQIALIAILP IAKAIYKNFW PGASENYSIY
0101: VLEEGGEKEE SGQAMKEGDF SDSNEVFVEA SGGDDDIKEI QSGVVAVENG VELSGTDKGF EAAAVELNEE EAKEKEVEEK VNDGGTDNSD SVVDEKSEGV
0201: DVEKDDGGGV DAVVDSVEVN VLGSGVAVVG DELGVDESEI KGLEEPESRG VSLDNGFEPI EKGEEEVVDK LVDGGDGQSG AEGVVVGGDD VSGENGDDGD
0301: GLKSDIVVPP EEGGGGSEFV EKDEVNMEGD VVEGENGSRV EEEVGHHGDR EIDDSELDGK IGSHVEEVEE IGANGDREIN GSVSDEKGDG VVFGSTDAAN
0401: KFLEDLELQQ SRASGSSRDD GQIVSDSDEE EETDDEGDGK ELFDTATLAA LLKAASGADQ DGGSITITSQ DGSRLFSVER PAGLGSSLSS GKPAMRQTRP
0501: SLFTPSISRA SAISDSNLSE EEKKKLEKLH EIRVKYLRLV HRLGFTTEES IAAQVLYRMT HVAGRQSGQM FSVESAKETA SQLEAEARDN FDFSVNILVL
0601: GKAGVGKSAT INSIFGETKT SINACGPATT AVTEIVGVVD GVKIRIFDTP GLKSSAFEQN FNTKVLSAVK KLTKKSPPDI VLYVDRLDLQ TRDMNDLPML
0701: RSITSVLGSS IWRNVIVTLT HAASAPPDGP SGAPLSYDVF VAQRSHIVQQ TIGQAVGDLR LMNPSLMNPV SLVENHPSCR KNRDGQKVLP NGQSWRPLLL
0801: LLCYSMKILS EASNVSKTQE SPFDQRRLFG FRPRSPPLPY LLSWLLQTRT YPKLPADQGG ADNGDSDIEM ADLSDSDLDE DEDEYDQLPP FKPMKKSQVA
0901: KLTKEQQKAY FEEYDYRVKL LQKKQWREEL RRMREMKKKG NTKENDYGYT EEDDQENGSP AAVPVPLPDM ALPPSFDSDN PAYRYRFLEP TSQLLTRPVL
1001: DSHGWDHDCG YDGVNIEQSL AIINKFPAAV TVQVTKDKKD FSMHLDSSVA AKLGENGSAM AGFDIQNIGK QLAYIVRGET KLKNFKRNKT SAGVSVTFFG
1101: ENVSTGLKVE DQIAVGKRVV LVGSTGVVKS QTDSAYGANV EVRLREADFP IGQDQSSLSL SLVKWRGDLA LGANLQSQFS VGRGYKVAVR AGLNNKLSGQ
1201: ISVRTSSSDQ LQIALIAILP IAKAIYKNFW PGASENYSIY
0001: MDSKSVTPEP TNPFYASSGQ SGKTYASVVA AAAAAAADKE DGGAVSSAKE LDSSSEAVSG NSDKVGADDL SDSEKEKPNL VGDGKVSDEV DGSLKEDSTT
0101: PEATPKPEVV SGETIGVDDV SSLSPKPEAV SDGVGVVEEN KKVKEDVEDI KDDGESKIEN GSVDVDVKQA STDGESESKV KDVEEEDVGT KKDDEGESEL
0201: GGKVDVDDKS DNVIEEEGVE LTDKGDVIVN SSPVESVHVD VAKPGVVVVG DAEGSEELKI NADAETLEVA NKFDQIGDDD SGEFEPVSDK AIEEVEEKFT
0301: SESDSIADSS KLESVDTSAV EPEVVAAESG SEPKDVEKAN GLEKGMTYAE VIKAASAVAD NGTKEEESVL GGIVDDAEEG VKLNNKGDFV VDSSAIEAVN
0401: VDVAKPGVVV VGDVEVSEVL ETDGNIPDVH NKFDPIGQGE GGEVELESDK ATEEGGGKLV SEGDSMVDSS VVDSVDADIN VAEPGVVVVG AAKEAVIKED
0501: DKDDEVDKTI SNIEEPDDLT AAYDGNFELA VKEISEAAKV EPDEPKVGVE VEELPVSESL KVGSVDAEED SIPAAESQFE VRKVVEGDSA EEDENKLPVE
0601: DIVSSREFSF GGKEVDQEPS GEGVTRVDGS ESEEETEEMI FGSSEAAKQF LAELEKASSG IEAHSDEANI SNNMSDRIDG QIVTDSDEDV DTEDEGEEKM
0701: FDTAALAALL KAATGGGSSE GGNFTITSQD GTKLFSMDRP AGLSSSLRPL KPAAAPRANR SNIFSNSNVT MADETEINLS EEEKQKLEKL QSLRVKFLRL
0801: LQRLGHSAED SIAAQVLYRL ALLAGRQAGQ LFSLDAAKKK AVESEAEGNE ELIFSLNILV LGKAGVGKSA TINSILGNQI ASIDAFGLST TSVREISGTV
0901: NGVKITFIDT PGLKSAAMDQ STNAKMLSSV KKVMKKCPPD IVLYVDRLDT QTRDLNNLPL LRTITASLGT SIWKNAIVTL THAASAPPDG PSGTPLSYDV
1001: FVAQCSHIVQ QSIGQAVGDL RLMNPSLMNP VSLVENHPLC RKNREGVKVL PNGQTWRSQL LLLCYSLKVL SETNSLLRPQ EPLDHRKVFG FRVRSPPLPY
1101: LLSWLLQSRA HPKLPGDQGG DSVDSDIEID DVSDSEQEDG EDDEYDQLPP FKPLRKTQLA KLSNEQRKAY FEEYDYRVKL LQKKQWREEL KRMKEMKKNG
1201: KKLGESEFGY PGEEDDPENG APAAVPVPLP DMVLPPSFDS DNSAYRYRYL EPTSQLLTRP VLDTHGWDHD CGYDGVNAEH SLALASRFPA TATVQVTKDK
1301: KEFNIHLDSS VSAKHGENGS TMAGFDIQNV GKQLAYVVRG ETKFKNLRKN KTTVGGSVTF LGENIATGVK LEDQIALGKR LVLVGSTGTM RSQGDSAYGA
1401: NLEVRLREAD FPIGQDQSSF GLSLVKWRGD LALGANLQSQ VSVGRNSKIA LRAGLNNKMS GQITVRTSSS DQLQIALTAI LPIAMSIYKS IRPEATNDKY
1501: SMY
0101: PEATPKPEVV SGETIGVDDV SSLSPKPEAV SDGVGVVEEN KKVKEDVEDI KDDGESKIEN GSVDVDVKQA STDGESESKV KDVEEEDVGT KKDDEGESEL
0201: GGKVDVDDKS DNVIEEEGVE LTDKGDVIVN SSPVESVHVD VAKPGVVVVG DAEGSEELKI NADAETLEVA NKFDQIGDDD SGEFEPVSDK AIEEVEEKFT
0301: SESDSIADSS KLESVDTSAV EPEVVAAESG SEPKDVEKAN GLEKGMTYAE VIKAASAVAD NGTKEEESVL GGIVDDAEEG VKLNNKGDFV VDSSAIEAVN
0401: VDVAKPGVVV VGDVEVSEVL ETDGNIPDVH NKFDPIGQGE GGEVELESDK ATEEGGGKLV SEGDSMVDSS VVDSVDADIN VAEPGVVVVG AAKEAVIKED
0501: DKDDEVDKTI SNIEEPDDLT AAYDGNFELA VKEISEAAKV EPDEPKVGVE VEELPVSESL KVGSVDAEED SIPAAESQFE VRKVVEGDSA EEDENKLPVE
0601: DIVSSREFSF GGKEVDQEPS GEGVTRVDGS ESEEETEEMI FGSSEAAKQF LAELEKASSG IEAHSDEANI SNNMSDRIDG QIVTDSDEDV DTEDEGEEKM
0701: FDTAALAALL KAATGGGSSE GGNFTITSQD GTKLFSMDRP AGLSSSLRPL KPAAAPRANR SNIFSNSNVT MADETEINLS EEEKQKLEKL QSLRVKFLRL
0801: LQRLGHSAED SIAAQVLYRL ALLAGRQAGQ LFSLDAAKKK AVESEAEGNE ELIFSLNILV LGKAGVGKSA TINSILGNQI ASIDAFGLST TSVREISGTV
0901: NGVKITFIDT PGLKSAAMDQ STNAKMLSSV KKVMKKCPPD IVLYVDRLDT QTRDLNNLPL LRTITASLGT SIWKNAIVTL THAASAPPDG PSGTPLSYDV
1001: FVAQCSHIVQ QSIGQAVGDL RLMNPSLMNP VSLVENHPLC RKNREGVKVL PNGQTWRSQL LLLCYSLKVL SETNSLLRPQ EPLDHRKVFG FRVRSPPLPY
1101: LLSWLLQSRA HPKLPGDQGG DSVDSDIEID DVSDSEQEDG EDDEYDQLPP FKPLRKTQLA KLSNEQRKAY FEEYDYRVKL LQKKQWREEL KRMKEMKKNG
1201: KKLGESEFGY PGEEDDPENG APAAVPVPLP DMVLPPSFDS DNSAYRYRYL EPTSQLLTRP VLDTHGWDHD CGYDGVNAEH SLALASRFPA TATVQVTKDK
1301: KEFNIHLDSS VSAKHGENGS TMAGFDIQNV GKQLAYVVRG ETKFKNLRKN KTTVGGSVTF LGENIATGVK LEDQIALGKR LVLVGSTGTM RSQGDSAYGA
1401: NLEVRLREAD FPIGQDQSSF GLSLVKWRGD LALGANLQSQ VSVGRNSKIA LRAGLNNKMS GQITVRTSSS DQLQIALTAI LPIAMSIYKS IRPEATNDKY
1501: SMY
Arabidopsis Description
TOC159Translocase of chloroplast 159, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O81283]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.