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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 2
  • nucleus 1
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS4A01G358400.1 Wheat plastid 89.64 87.84
TraesCS5D01G514500.1 Wheat cytosol, plastid 90.5 87.43
TraesCS5B01G514000.1 Wheat cytosol 91.01 87.2
OQU90674 Sorghum nucleus 55.14 69.55
Os03t0835100-00 Rice cytosol, plastid 65.41 63.35
Zm00001d012893_P002 Maize cytosol, plastid 60.45 62.04
Zm00001d034755_P001 Maize cytosol 60.62 61.35
CDX97269 Canola cytosol 3.25 57.58
CDY50376 Canola cytosol 28.34 47.49
KRH30746 Soybean cytosol 5.22 46.56
CDX97270 Canola cytosol 15.92 42.37
HORVU1Hr1G053280.1 Barley mitochondrion 25.17 42.18
CDX91288 Canola cytosol 26.97 40.08
PGSC0003DMT400029640 Potato cytosol 34.08 40.04
Bra018546.1-P Field mustard mitochondrion 28.85 37.78
KRH43000 Soybean nucleus 35.27 34.77
KRH59116 Soybean nucleus 36.13 34.03
Solyc01g080780.2.1 Tomato nucleus 31.59 33.48
HORVU5Hr1G031380.1 Barley mitochondrion 21.83 32.32
HORVU1Hr1G021840.9 Barley nucleus 38.96 31.91
VIT_05s0020g01290.t01 Wine grape cytosol 33.9 30.67
VIT_07s0005g00180.t01 Wine grape plastid 37.67 30.03
PGSC0003DMT400016119 Potato cytosol, nucleus, plastid 34.42 29.54
Solyc09g074940.1.1 Tomato plastid 35.19 29.29
AT4G02510.4 Thale cress nucleus 36.04 28.01
Bra036261.1-P Field mustard nucleus 35.19 26.45
KRH02257 Soybean cytosol 17.12 23.26
HORVU4Hr1G064110.2 Barley cytosol 6.93 22.75
Bra033515.1-P Field mustard cytosol 15.33 16.24
CDY44175 Canola cytosol 11.9 15.04
AT4G15810.1 Thale cress cytosol 11.13 14.16
CDY22896 Canola cytosol 11.9 13.72
Protein Annotations
MapMan:23.1.2.2Gene3D:3.40.50.300UniProt:A0A287SW59ncoils:CoilGO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0005488GO:GO:0005525GO:GO:0016787GO:GO:0016817InterPro:G_AIG1
EnsemblPlantsGene:HORVU5Hr1G117690EnsemblPlants:HORVU5Hr1G117690.19InterPro:IPR006703InterPro:P-loop_NTPasePFAM:PF04548PFAM:PF11886
PFscan:PS51720PANTHER:PTHR10903PANTHER:PTHR10903:SF64SUPFAM:SSF52540TIGRFAMs:TIGR00993InterPro:TOC159_MAD
InterPro:Toc86_159UniParc:UPI000B46ED33SEG:seg:::
Description
No Description!
Coordinates
chrchr5H:-:651049082..651052745
Molecular Weight (calculated)
127498.0 Da
IEP (calculated)
4.462
GRAVY (calculated)
-0.525
Length
1168 amino acids
Sequence
(BLAST)
0001: IRAPLTSFDS GDDDDDEGYA SSLSSGAASP SPSPSRSPST SPPEVRLPRP RPALGAPRVA AQLSSSTDDE ADLFDDAAGS SGDDVLQEVS NGFFRVARVP
0101: PPPPSPSSDE APEPPASASS GESDYFGAAE GPEEEEAAAD VFVDAGTGSG MEEDGGVFAA STGAVAEGSL DGSFVSSMSV LDDGAAFGDL VNLSDMSLMN
0201: GGKQGAEDSG AEAVNSVEPD PSIGDAGGTH IVDASEGNSG GSQQEQLVVE LPPALNSTQE EEEDARLQVI NDDSDAKNTM PKHEVVTHSE DASPEHVTAR
0301: DAMVEPAQVH TNVDSSQFTV DGGHHKVDGE TDGDYQPSDE PASVPNIRIN YALESPGKEM EDSAPASKGT RFGLDDSDED QLDDDYQVEE LSGKENELFD
0401: YAALAELLRA ANRSPGQGKA KVFPVETSHP IEPSPTVVGV PRTSVASTHE LDAIADPESA MTDEEKKLYM KVDMARIKYL RLVYRLGYDT EHQVPVQVLY
0501: RLSLVEGFRR IRMANHSSEL ENAWSRALQL ETEGIDDLEF SCNVLVLGKT GVINSIFGED KSRTNAFLPA TCSVKEITGV VGGVKFRVID TPGLGTTVRD
0601: EKSNRKMLKS VKKYMKKCPP DIVLYVDRID TQRQGADDLS LLQCITSVLG LPIWSKAIIT LTHSAADPPP EGPSGSPINY EMIVTHRTHA LQQSIRQATN
0701: DPRTENPVAL VENHHLCRRN MEGEKVLPNG LIWRRLLLLL CYSLKMVAEI DTLSTRRAGS PSLFDLRLQM PALPYFLSSL LQSREHPRHA NEQKVESVDS
0801: DVDPDELLDE DQEDEEYDQL PPFKPLSKSQ VAKLSKEQQK LYFDEYDYRT KLLQKKQLKE HRRRLKEMKK SEGNYDDVLV DNDHPDDEYD NDRSLMPDWA
0901: LPSSFDSDDP VYRYRCLEPV TNLLARAVTN PEGWDHDCGF DGVSLQYSHE IANAFPASMW VQVNKDKREF TIHSESSVSA KHSEYASTLA GFDIQTMMDQ
1001: LAYTLRGETK FRNTKNNATT GGLSMTLAGN TMITGAKLED KLSVGNWLTL VANAGAVSMK GDTAHGVNVV LNLLQKDYPI MGLGLATLGA SLVRWHKEWT
1101: TAANLDTQFS VGRTSNMAVH VDLNNKLTGR VSIKANSSEH LTIALLGVYS MAMYVRNRMR PRAHPNNE
Best Arabidopsis Sequence Match ( AT2G16640.3 )
(BLAST)
0001: MGDGTEFVVR SDREDKKLAE DRISDEQVVK NELVRSDEVR DDNEDEVFEE AIGSENDEQE EEEDPKRELF ESDDLPLVET LKSSMVEHEV EDFEEAVGDL
0101: DETSSNEGGV KDFTAVGESH GAGEAEFDVL ATKMNGDKGE GGGGGSYDKV ESSLDVVDTT ENATSTNTNG SNLAAEHVGI ENGKTHSFLG NGIASPKNKE
0201: VVAEVIPKDD GIEEPWNDGI EVDNWEERVD GIQTEQEVEE GEGTTENQFE KRTEEEVVEG EGTSKNLFEK QTEQDVVEGE GTSKDLFENG SVCMDSESEA
0301: ERNGETGAAY TSNIVTNASG DNEVSSAVTS SPLEESSSGE KGETEGDSTC LKPEQHLASS PHSYPESTEV HSNSGSPGVT SREHKPVQSA NGGHDVQSPQ
0401: PNKELEKQQS SRVHVDPEIT ENSHVETEPE VVSSVSPTES RSNPAALPPA RPAGLGRASP LLEPASRAPQ QSRVNGNGSH NQFQQAEDST TTEADEHDET
0501: REKLQLIRVK FLRLAHRLGQ TPHNVVVAQV LYRLGLAEQL RGRNGSRVGA FSFDRASAMA EQLEAAGQDP LDFSCTIMVL GKSGVGKSAT INSIFDEVKF
0601: CTDAFQMGTK RVQDVEGLVQ GIKVRVIDTP GLLPSWSDQA KNEKILNSVK AFIKKNPPDI VLYLDRLDMQ SRDSGDMPLL RTISDVFGPS IWFNAIVGLT
0701: HAASVPPDGP NGTASSYDMF VTQRSHVIQQ AIRQAAGDMR LMNPVSLVEN HSACRTNRAG QRVLPNGQVW KPHLLLLSFA SKILAEANAL LKLQDNIPGR
0801: PFAARSKAPP LPFLLSSLLQ SRPQPKLPEQ QYGDEEDEDD LEESSDSDEE SEYDQLPPFK SLTKAQMATL SKSQKKQYLD EMEYREKLLM KKQMKEERKR
0901: RKMFKKFAAE IKDLPDGYSE NVEEESGGPA SVPVPMPDLS LPASFDSDNP THRYRYLDSS NQWLVRPVLE THGWDHDIGY EGVNAERLFV VKEKIPISVS
1001: GQVTKDKKDA NVQLEMASSV KHGEGKSTSL GFDMQTVGKE LAYTLRSETR FNNFRRNKAA AGLSVTHLGD SVSAGLKVED KFIASKWFRI VMSGGAMTSR
1101: GDFAYGGTLE AQLRDKDYPL GRFLTTLGLS VMDWHGDLAI GGNIQSQVPI GRSSNLIARA NLNNRGAGQV SVRVNSSEQL QLAMVAIVPL FKKLLSYYYP
1201: QTQYGQ
Arabidopsis Description
TOC132Translocase of chloroplast 132, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SLF3]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.