Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY44175 | Canola | cytosol | 59.04 | 58.66 |
| CDY22896 | Canola | cytosol | 59.15 | 53.6 |
| Bra033515.1-P | Field mustard | cytosol | 58.71 | 48.91 |
| AT1G02280.1 | Thale cress | cytosol | 5.66 | 17.51 |
| AT5G05000.3 | Thale cress | cytosol | 5.45 | 15.97 |
| GSMUA_Achr9P31010_001 | Banana | cytosol | 15.25 | 14.16 |
| GSMUA_Achr9P31000_001 | Banana | cytosol | 16.12 | 13.55 |
| KRH02257 | Soybean | cytosol | 12.42 | 13.26 |
| OQU90674 | Sorghum | nucleus | 13.29 | 13.17 |
| Zm00001d010852_P002 | Maize | plastid | 16.78 | 12.76 |
| AT5G20300.4 | Thale cress | cytosol | 10.89 | 12.61 |
| AT3G16620.1 | Thale cress | cytosol | 14.81 | 12.49 |
| Solyc01g080780.2.1 | Tomato | nucleus | 14.81 | 12.34 |
| Os05t0151400-01 | Rice | plastid | 17.32 | 12.17 |
| Zm00001d034755_P001 | Maize | cytosol | 15.14 | 12.05 |
| Zm00001d035812_P003 | Maize | plastid | 16.99 | 11.99 |
| AT2G16640.3 | Thale cress | cytosol | 15.69 | 11.94 |
| VIT_05s0020g01290.t01 | Wine grape | cytosol | 16.78 | 11.93 |
| TraesCS1A01G093900.3 | Wheat | cytosol, nucleus, plastid | 18.3 | 11.8 |
| Zm00001d012893_P002 | Maize | cytosol, plastid | 14.6 | 11.78 |
| TraesCS1D01G102500.3 | Wheat | cytosol, nucleus, plastid | 18.19 | 11.72 |
| HORVU1Hr1G021840.9 | Barley | nucleus | 18.19 | 11.71 |
| TraesCS1B01G122000.4 | Wheat | cytosol, nucleus, plastid | 18.3 | 11.71 |
| Os03t0835100-00 | Rice | cytosol, plastid | 15.36 | 11.69 |
| GSMUA_Achr6P20360_001 | Banana | cytosol | 14.38 | 11.67 |
| OQU77419 | Sorghum | nucleus | 16.88 | 11.61 |
| PGSC0003DMT400016119 | Potato | cytosol, nucleus, plastid | 16.99 | 11.46 |
| TraesCS4A01G358400.1 | Wheat | plastid | 14.71 | 11.33 |
| HORVU5Hr1G117690.19 | Barley | plastid | 14.16 | 11.13 |
| TraesCS5B01G514000.1 | Wheat | cytosol | 14.6 | 10.99 |
| TraesCS5D01G514500.1 | Wheat | cytosol, plastid | 14.38 | 10.92 |
| AT4G02510.4 | Thale cress | nucleus | 17.21 | 10.51 |
| Os01t0356800-00 | Rice | plastid | 15.47 | 2.66 |
Protein Annotations
| Gene3D:3.40.50.300 | MapMan:35.1 | EntrezGene:827262 | ProteinID:AEE83655.1 | ArrayExpress:AT4G15810 | EnsemblPlantsGene:AT4G15810 |
| RefSeq:AT4G15810 | TAIR:AT4G15810 | RefSeq:AT4G15810-TAIR-G | EnsemblPlants:AT4G15810.1 | TAIR:AT4G15810.1 | Unigene:At.54344 |
| ncoils:Coil | UniProt:F4JKW7 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005525 | GO:GO:0005575 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 |
| InterPro:G_AIG1 | InterPro:IPR006703 | RefSeq:NP_193316.4 | InterPro:P-loop_NTPase | PFAM:PF04548 | PO:PO:0000037 |
| PO:PO:0000293 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0004507 | PO:PO:0007611 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0025022 | PANTHER:PTHR10903 |
| PANTHER:PTHR10903:SF39 | SUPFAM:SSF52540 | UniParc:UPI0001E92F0C | SEG:seg | : | : |
Description
P-loop containing nucleoside triphosphate hydrolases superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JKW7]
Coordinates
chr4:-:8989162..8992756
Molecular Weight (calculated)
99692.7 Da
IEP (calculated)
4.115
GRAVY (calculated)
-0.403
Length
918 amino acids
Sequence
(BLAST)
(BLAST)
001: MESEKPGIVS ILAAATVDSE KPRVSISAVR AIAAARADSF LLTPSSEASS YSNGLDFETD EDETVLEDVV LDGVRVDRLL GEELGGDGSE FQVGVGFIDH
101: LQSEVSGDER GSMKAKVVIP RAVLSLDDDE FDEILGSDVD SEEVRMNYSD KLDDGLMSFG NIEESSLGVP PEGSSDFMAE NEGNSSEASI ELGQNFKQLI
201: EKGDSKSTIN KEDSGGSIHE FDALMKPSDV ERVEDSAVEL AKMGMNDKPE YAGSNIGELV SIEEVMVQEK SSDNVLVSFE SSLGVMTGEC KEFLVESEGN
301: AVDEDKGLDE TVSSLVEQGV GQASTSKESN NRTDVGSVCD ADELIIPRDE SIGSESRDSG DKDAGNMIGK AEEHCENDRG AVSELEKLEC ADEPEIGMSS
401: ESFQLTPTSD SEMIMNLEVA GGIDVVVIGC GSSDQKAEEE SENEGNQESD DTDRKLSLPD EDRASSLISS FETANETVED GNQLISRTMP ENSSVIAYDI
501: MENETMARLI HNHTFMELDE YEGTGDTSEK LTGSSFQNSS ELLSSNHSVE LISERVKERV EKTQLLKEKL QRIIRRTCLS RENSTVTKVA SKMSLAGGEH
601: PTSLGLDHMF DGTKIVLPEQ EFPADLDFSI NVLVIGKTGV GKSATVNSIF GETKSAVGAF GVTTNSANYV VGNVGGIQIS ILDTPGLLSS ATEEQFNQEV
701: LIARCLGIVL AENNMSFFSA NKSSESTCSD WRLNLLILCC SVKIRSKAGS LQKQNTDVEK AGVFGSQLSS FTLFCSLWNV LLNSGHTSHS HDDLEEKKRK
801: LLDSYPEIIW DEQSQECLEQ ETLLVENQES EDVERQHEKG TVLGRVRTRR GRLGFQATKR FGIYLDTSDV HAGFSIGSRD CRRNVQEEGK ILVRMRGSMS
901: VLGLVPMLIS VFTSGKDI
101: LQSEVSGDER GSMKAKVVIP RAVLSLDDDE FDEILGSDVD SEEVRMNYSD KLDDGLMSFG NIEESSLGVP PEGSSDFMAE NEGNSSEASI ELGQNFKQLI
201: EKGDSKSTIN KEDSGGSIHE FDALMKPSDV ERVEDSAVEL AKMGMNDKPE YAGSNIGELV SIEEVMVQEK SSDNVLVSFE SSLGVMTGEC KEFLVESEGN
301: AVDEDKGLDE TVSSLVEQGV GQASTSKESN NRTDVGSVCD ADELIIPRDE SIGSESRDSG DKDAGNMIGK AEEHCENDRG AVSELEKLEC ADEPEIGMSS
401: ESFQLTPTSD SEMIMNLEVA GGIDVVVIGC GSSDQKAEEE SENEGNQESD DTDRKLSLPD EDRASSLISS FETANETVED GNQLISRTMP ENSSVIAYDI
501: MENETMARLI HNHTFMELDE YEGTGDTSEK LTGSSFQNSS ELLSSNHSVE LISERVKERV EKTQLLKEKL QRIIRRTCLS RENSTVTKVA SKMSLAGGEH
601: PTSLGLDHMF DGTKIVLPEQ EFPADLDFSI NVLVIGKTGV GKSATVNSIF GETKSAVGAF GVTTNSANYV VGNVGGIQIS ILDTPGLLSS ATEEQFNQEV
701: LIARCLGIVL AENNMSFFSA NKSSESTCSD WRLNLLILCC SVKIRSKAGS LQKQNTDVEK AGVFGSQLSS FTLFCSLWNV LLNSGHTSHS HDDLEEKKRK
801: LLDSYPEIIW DEQSQECLEQ ETLLVENQES EDVERQHEKG TVLGRVRTRR GRLGFQATKR FGIYLDTSDV HAGFSIGSRD CRRNVQEEGK ILVRMRGSMS
901: VLGLVPMLIS VFTSGKDI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.