Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400016119 | Potato | cytosol, nucleus, plastid | 92.74 | 75.09 |
| GSMUA_Achr9P31010_001 | Banana | cytosol | 40.38 | 44.99 |
| Zm00001d010852_P002 | Maize | plastid | 43.47 | 39.69 |
| OQU90674 | Sorghum | nucleus | 33.03 | 39.31 |
| GSMUA_Achr9P31000_001 | Banana | cytosol | 38.75 | 39.1 |
| Os05t0151400-01 | Rice | plastid | 44.37 | 37.44 |
| VIT_05s0020g01290.t01 | Wine grape | cytosol | 43.47 | 37.1 |
| Zm00001d035812_P003 | Maize | plastid | 43.74 | 37.05 |
| Solyc07g007650.1.1 | Tomato | cytosol | 18.15 | 36.83 |
| OQU77419 | Sorghum | nucleus | 44.19 | 36.48 |
| Solyc09g074940.1.1 | Tomato | plastid | 45.92 | 36.07 |
| TraesCS1A01G093900.3 | Wheat | cytosol, nucleus, plastid | 44.74 | 34.62 |
| TraesCS1D01G102500.3 | Wheat | cytosol, nucleus, plastid | 44.74 | 34.6 |
| HORVU1Hr1G021840.9 | Barley | nucleus | 44.65 | 34.5 |
| TraesCS1B01G122000.4 | Wheat | cytosol, nucleus, plastid | 44.92 | 34.49 |
| Solyc11g043010.1.1 | Tomato | nucleus | 21.6 | 32.69 |
| HORVU5Hr1G117690.19 | Barley | plastid | 33.48 | 31.59 |
| Os03t0835100-00 | Rice | cytosol, plastid | 34.39 | 31.43 |
| TraesCS4A01G358400.1 | Wheat | plastid | 33.39 | 30.87 |
| Zm00001d034755_P001 | Maize | cytosol | 32.21 | 30.76 |
| Zm00001d012893_P002 | Maize | cytosol, plastid | 31.76 | 30.76 |
| TraesCS5D01G514500.1 | Wheat | cytosol, plastid | 33.48 | 30.52 |
| Solyc03g095220.2.1 | Tomato | plastid | 7.17 | 30.5 |
| GSMUA_Achr6P20360_001 | Banana | cytosol | 31.03 | 30.24 |
| TraesCS5B01G514000.1 | Wheat | cytosol | 32.94 | 29.78 |
| Solyc05g052160.2.1 | Tomato | plastid | 7.89 | 28.9 |
| Solyc01g111240.2.1 | Tomato | nucleus | 30.94 | 25.43 |
| KRH02257 | Soybean | cytosol | 19.42 | 24.88 |
| Bra033515.1-P | Field mustard | cytosol | 17.06 | 17.06 |
| CDY44175 | Canola | cytosol | 12.52 | 14.94 |
| AT4G15810.1 | Thale cress | cytosol | 12.34 | 14.81 |
| CDY22896 | Canola | cytosol | 12.89 | 14.02 |
| Os01t0356800-00 | Rice | plastid | 20.78 | 4.29 |
Protein Annotations
| MapMan:23.1.2.2 | Gene3D:3.40.50.300 | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 | GO:GO:0016817 | InterPro:G_AIG1 | InterPro:IPR006703 |
| UniProt:K4AXX1 | InterPro:P-loop_NTPase | PFAM:PF04548 | PFAM:PF11886 | PFscan:PS51720 | PANTHER:PTHR10903 |
| PANTHER:PTHR10903:SF39 | SUPFAM:SSF52540 | EnsemblPlantsGene:Solyc01g080780.2 | EnsemblPlants:Solyc01g080780.2.1 | TIGRFAMs:TIGR00993 | InterPro:TOC159_MAD |
| InterPro:Toc86_159 | UniParc:UPI0002762768 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr1:+:80015564..80019025
Molecular Weight (calculated)
121240.0 Da
IEP (calculated)
4.564
GRAVY (calculated)
-0.448
Length
1102 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEEDLIITKT VEMVLDSDSI EDDKAEIDTV QNFITEGGEA NYTLEGGRDL YQVASKESTL LGQELDNDKM LLAEESQILD SSVESKSADS SRGVKPSDTA
0101: YSSPREENRV SKFGADDLNS GNSIILHTGA SGDSQKSESK EDGVYQGSDC QDIATRTETE SYHEPIKDSE AESLECIDIS VPSTAEEQVY SSSDVTWSTR
0201: AEDDLPKLSD KTQHREARLN PDLEAKCKDI DTVKLFKNEE ALFLHENDES LTFDGSGGMK LIIDQSDQQI ANADYDGEVS EGHLPKVDAE IVTDLAEEVD
0301: TDEESEENEM FDAEALAMLL RAATGVGPEG RSVSIPSADG TQVSSLELPD TPGSSFHSSR PGQPTNADKF PLSDNKTEGI SEVILSEEEK KKLEKLQQLR
0401: ITFLRLVHKL NRSPEDSIAA QVLYRLVRAA GKSASQVLSL DSDQKVAIEL EAEDTDSLNF SLNILVIGKT GVGKSATINS IFGEAKSMVD AFVPATTDVK
0501: EIIGQLDGVT LNILDTPGFR SSLTEQSINR RTLLSIKKYM KKYSPDVVLY VDRIDTQSRD LGDLPLFKSI SSYLGPSIWR NAIVTLTHAA SSPPDGPSGH
0601: PVSYEMFVAQ CSRIIQQLID HSIGDPHTMN AGLMSLPFAL VENHPVSPKN DKGDILLPNG ENWRSQLLLL CYSIKILSEV DSIMKDQDLH DHRKLFGFPK
0701: RSLPLPYFLS SLLQSNVHPK VSNNQVGGDI GSDIELVHSS DSDQEVDDYD DLPPFRPLRK SQIAKLSKEQ KRAYFDEYDY RVKLFQKKQW REELKRLRDM
0801: KKKGKAEIGD YMEEGADQET GSQAGAAIPL PDMVLPNSFD GDNPTYRYRY LEPSSQLLAR PVMDSQSWDH DCGYDGVSIE DHLAIAGQFP AVIVLQLTKD
0901: KKEFNIHLDS SVSAKTGKKG SSMVGFDIQT VGKQLAYILK GETKVKNLKT NKTAAGISIT FLGDTLVTGL KLEDQFSIGK QLVVVGSTGT IMSQGNAAYG
1001: ANLELRLREK DYPVGQDQSS LGLSLMKWRN DLIWGCNLQS QFSVGRNSKI AVRAGLNSKK SGQITVRTST SDQLLIAIVG LLPIARAIMM TLFPQTSGKN
1101: LI
0101: YSSPREENRV SKFGADDLNS GNSIILHTGA SGDSQKSESK EDGVYQGSDC QDIATRTETE SYHEPIKDSE AESLECIDIS VPSTAEEQVY SSSDVTWSTR
0201: AEDDLPKLSD KTQHREARLN PDLEAKCKDI DTVKLFKNEE ALFLHENDES LTFDGSGGMK LIIDQSDQQI ANADYDGEVS EGHLPKVDAE IVTDLAEEVD
0301: TDEESEENEM FDAEALAMLL RAATGVGPEG RSVSIPSADG TQVSSLELPD TPGSSFHSSR PGQPTNADKF PLSDNKTEGI SEVILSEEEK KKLEKLQQLR
0401: ITFLRLVHKL NRSPEDSIAA QVLYRLVRAA GKSASQVLSL DSDQKVAIEL EAEDTDSLNF SLNILVIGKT GVGKSATINS IFGEAKSMVD AFVPATTDVK
0501: EIIGQLDGVT LNILDTPGFR SSLTEQSINR RTLLSIKKYM KKYSPDVVLY VDRIDTQSRD LGDLPLFKSI SSYLGPSIWR NAIVTLTHAA SSPPDGPSGH
0601: PVSYEMFVAQ CSRIIQQLID HSIGDPHTMN AGLMSLPFAL VENHPVSPKN DKGDILLPNG ENWRSQLLLL CYSIKILSEV DSIMKDQDLH DHRKLFGFPK
0701: RSLPLPYFLS SLLQSNVHPK VSNNQVGGDI GSDIELVHSS DSDQEVDDYD DLPPFRPLRK SQIAKLSKEQ KRAYFDEYDY RVKLFQKKQW REELKRLRDM
0801: KKKGKAEIGD YMEEGADQET GSQAGAAIPL PDMVLPNSFD GDNPTYRYRY LEPSSQLLAR PVMDSQSWDH DCGYDGVSIE DHLAIAGQFP AVIVLQLTKD
0901: KKEFNIHLDS SVSAKTGKKG SSMVGFDIQT VGKQLAYILK GETKVKNLKT NKTAAGISIT FLGDTLVTGL KLEDQFSIGK QLVVVGSTGT IMSQGNAAYG
1001: ANLELRLREK DYPVGQDQSS LGLSLMKWRN DLIWGCNLQS QFSVGRNSKI AVRAGLNSKK SGQITVRTST SDQLLIAIVG LLPIARAIMM TLFPQTSGKN
1101: LI
0001: MDSKSVTPEP TNPFYASSGQ SGKTYASVVA AAAAAAADKE DGGAVSSAKE LDSSSEAVSG NSDKVGADDL SDSEKEKPNL VGDGKVSDEV DGSLKEDSTT
0101: PEATPKPEVV SGETIGVDDV SSLSPKPEAV SDGVGVVEEN KKVKEDVEDI KDDGESKIEN GSVDVDVKQA STDGESESKV KDVEEEDVGT KKDDEGESEL
0201: GGKVDVDDKS DNVIEEEGVE LTDKGDVIVN SSPVESVHVD VAKPGVVVVG DAEGSEELKI NADAETLEVA NKFDQIGDDD SGEFEPVSDK AIEEVEEKFT
0301: SESDSIADSS KLESVDTSAV EPEVVAAESG SEPKDVEKAN GLEKGMTYAE VIKAASAVAD NGTKEEESVL GGIVDDAEEG VKLNNKGDFV VDSSAIEAVN
0401: VDVAKPGVVV VGDVEVSEVL ETDGNIPDVH NKFDPIGQGE GGEVELESDK ATEEGGGKLV SEGDSMVDSS VVDSVDADIN VAEPGVVVVG AAKEAVIKED
0501: DKDDEVDKTI SNIEEPDDLT AAYDGNFELA VKEISEAAKV EPDEPKVGVE VEELPVSESL KVGSVDAEED SIPAAESQFE VRKVVEGDSA EEDENKLPVE
0601: DIVSSREFSF GGKEVDQEPS GEGVTRVDGS ESEEETEEMI FGSSEAAKQF LAELEKASSG IEAHSDEANI SNNMSDRIDG QIVTDSDEDV DTEDEGEEKM
0701: FDTAALAALL KAATGGGSSE GGNFTITSQD GTKLFSMDRP AGLSSSLRPL KPAAAPRANR SNIFSNSNVT MADETEINLS EEEKQKLEKL QSLRVKFLRL
0801: LQRLGHSAED SIAAQVLYRL ALLAGRQAGQ LFSLDAAKKK AVESEAEGNE ELIFSLNILV LGKAGVGKSA TINSILGNQI ASIDAFGLST TSVREISGTV
0901: NGVKITFIDT PGLKSAAMDQ STNAKMLSSV KKVMKKCPPD IVLYVDRLDT QTRDLNNLPL LRTITASLGT SIWKNAIVTL THAASAPPDG PSGTPLSYDV
1001: FVAQCSHIVQ QSIGQAVGDL RLMNPSLMNP VSLVENHPLC RKNREGVKVL PNGQTWRSQL LLLCYSLKVL SETNSLLRPQ EPLDHRKVFG FRVRSPPLPY
1101: LLSWLLQSRA HPKLPGDQGG DSVDSDIEID DVSDSEQEDG EDDEYDQLPP FKPLRKTQLA KLSNEQRKAY FEEYDYRVKL LQKKQWREEL KRMKEMKKNG
1201: KKLGESEFGY PGEEDDPENG APAAVPVPLP DMVLPPSFDS DNSAYRYRYL EPTSQLLTRP VLDTHGWDHD CGYDGVNAEH SLALASRFPA TATVQVTKDK
1301: KEFNIHLDSS VSAKHGENGS TMAGFDIQNV GKQLAYVVRG ETKFKNLRKN KTTVGGSVTF LGENIATGVK LEDQIALGKR LVLVGSTGTM RSQGDSAYGA
1401: NLEVRLREAD FPIGQDQSSF GLSLVKWRGD LALGANLQSQ VSVGRNSKIA LRAGLNNKMS GQITVRTSSS DQLQIALTAI LPIAMSIYKS IRPEATNDKY
1501: SMY
0101: PEATPKPEVV SGETIGVDDV SSLSPKPEAV SDGVGVVEEN KKVKEDVEDI KDDGESKIEN GSVDVDVKQA STDGESESKV KDVEEEDVGT KKDDEGESEL
0201: GGKVDVDDKS DNVIEEEGVE LTDKGDVIVN SSPVESVHVD VAKPGVVVVG DAEGSEELKI NADAETLEVA NKFDQIGDDD SGEFEPVSDK AIEEVEEKFT
0301: SESDSIADSS KLESVDTSAV EPEVVAAESG SEPKDVEKAN GLEKGMTYAE VIKAASAVAD NGTKEEESVL GGIVDDAEEG VKLNNKGDFV VDSSAIEAVN
0401: VDVAKPGVVV VGDVEVSEVL ETDGNIPDVH NKFDPIGQGE GGEVELESDK ATEEGGGKLV SEGDSMVDSS VVDSVDADIN VAEPGVVVVG AAKEAVIKED
0501: DKDDEVDKTI SNIEEPDDLT AAYDGNFELA VKEISEAAKV EPDEPKVGVE VEELPVSESL KVGSVDAEED SIPAAESQFE VRKVVEGDSA EEDENKLPVE
0601: DIVSSREFSF GGKEVDQEPS GEGVTRVDGS ESEEETEEMI FGSSEAAKQF LAELEKASSG IEAHSDEANI SNNMSDRIDG QIVTDSDEDV DTEDEGEEKM
0701: FDTAALAALL KAATGGGSSE GGNFTITSQD GTKLFSMDRP AGLSSSLRPL KPAAAPRANR SNIFSNSNVT MADETEINLS EEEKQKLEKL QSLRVKFLRL
0801: LQRLGHSAED SIAAQVLYRL ALLAGRQAGQ LFSLDAAKKK AVESEAEGNE ELIFSLNILV LGKAGVGKSA TINSILGNQI ASIDAFGLST TSVREISGTV
0901: NGVKITFIDT PGLKSAAMDQ STNAKMLSSV KKVMKKCPPD IVLYVDRLDT QTRDLNNLPL LRTITASLGT SIWKNAIVTL THAASAPPDG PSGTPLSYDV
1001: FVAQCSHIVQ QSIGQAVGDL RLMNPSLMNP VSLVENHPLC RKNREGVKVL PNGQTWRSQL LLLCYSLKVL SETNSLLRPQ EPLDHRKVFG FRVRSPPLPY
1101: LLSWLLQSRA HPKLPGDQGG DSVDSDIEID DVSDSEQEDG EDDEYDQLPP FKPLRKTQLA KLSNEQRKAY FEEYDYRVKL LQKKQWREEL KRMKEMKKNG
1201: KKLGESEFGY PGEEDDPENG APAAVPVPLP DMVLPPSFDS DNSAYRYRYL EPTSQLLTRP VLDTHGWDHD CGYDGVNAEH SLALASRFPA TATVQVTKDK
1301: KEFNIHLDSS VSAKHGENGS TMAGFDIQNV GKQLAYVVRG ETKFKNLRKN KTTVGGSVTF LGENIATGVK LEDQIALGKR LVLVGSTGTM RSQGDSAYGA
1401: NLEVRLREAD FPIGQDQSSF GLSLVKWRGD LALGANLQSQ VSVGRNSKIA LRAGLNNKMS GQITVRTSSS DQLQIALTAI LPIAMSIYKS IRPEATNDKY
1501: SMY
Arabidopsis Description
TOC159Translocase of chloroplast 159, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O81283]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.