Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G358400.1 | Wheat | plastid | 92.8 | 94.13 |
| TraesCS5B01G514000.1 | Wheat | cytosol | 92.89 | 92.12 |
| HORVU5Hr1G117690.19 | Barley | plastid | 87.43 | 90.5 |
| OQU90674 | Sorghum | nucleus | 53.68 | 70.09 |
| Os03t0835100-00 | Rice | cytosol, plastid | 64.6 | 64.76 |
| Zm00001d012893_P002 | Maize | cytosol, plastid | 58.64 | 62.3 |
| Zm00001d034755_P001 | Maize | cytosol | 58.97 | 61.79 |
| CDX97269 | Canola | cytosol | 3.14 | 57.58 |
| CDY50376 | Canola | cytosol | 27.13 | 47.06 |
| KRH30746 | Soybean | cytosol | 5.05 | 46.56 |
| CDX97270 | Canola | cytosol | 15.14 | 41.69 |
| PGSC0003DMT400029640 | Potato | cytosol | 33.5 | 40.74 |
| CDX91288 | Canola | cytosol | 26.22 | 40.33 |
| Bra018546.1-P | Field mustard | mitochondrion | 27.87 | 37.78 |
| KRH43000 | Soybean | nucleus | 34.16 | 34.85 |
| KRH59116 | Soybean | nucleus | 34.9 | 34.03 |
| TraesCS5D01G120200.1 | Wheat | mitochondrion | 22.0 | 33.89 |
| Solyc01g080780.2.1 | Tomato | nucleus | 30.52 | 33.48 |
| TraesCS1D01G102500.3 | Wheat | cytosol, nucleus, plastid | 38.21 | 32.42 |
| VIT_05s0020g01290.t01 | Wine grape | cytosol | 32.67 | 30.6 |
| VIT_07s0005g00180.t01 | Wine grape | plastid | 36.48 | 30.1 |
| Solyc09g074940.1.1 | Tomato | plastid | 34.66 | 29.86 |
| TraesCS1D01G211300.1 | Wheat | cytosol, golgi | 26.47 | 29.8 |
| PGSC0003DMT400016119 | Potato | cytosol, nucleus, plastid | 33.42 | 29.68 |
| AT4G02510.4 | Thale cress | nucleus | 35.4 | 28.48 |
| TraesCS4D01G230000.1 | Wheat | cytosol | 7.28 | 26.99 |
| Bra036261.1-P | Field mustard | nucleus | 33.99 | 26.45 |
| KRH02257 | Soybean | cytosol | 16.79 | 23.6 |
| Bra033515.1-P | Field mustard | cytosol | 15.05 | 16.52 |
| CDY44175 | Canola | cytosol | 11.75 | 15.37 |
| AT4G15810.1 | Thale cress | cytosol | 10.92 | 14.38 |
| CDY22896 | Canola | cytosol | 11.83 | 14.12 |
Protein Annotations
| MapMan:23.1.2.2 | Gene3D:3.40.50.300 | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 | GO:GO:0016817 | InterPro:G_AIG1 | InterPro:IPR006703 |
| InterPro:P-loop_NTPase | PFAM:PF04548 | PFAM:PF11886 | PFscan:PS51720 | PANTHER:PTHR10903 | PANTHER:PTHR10903:SF64 |
| SUPFAM:SSF52540 | TIGRFAMs:TIGR00993 | InterPro:TOC159_MAD | InterPro:Toc86_159 | EnsemblPlantsGene:TraesCS5D01G514500 | EnsemblPlants:TraesCS5D01G514500.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr5D:+:538162801..538167908
Molecular Weight (calculated)
130974.0 Da
IEP (calculated)
4.413
GRAVY (calculated)
-0.475
Length
1209 amino acids
Sequence
(BLAST)
(BLAST)
0001: MALLIRAPLT SFDDSGDDDE GYASSLSSGA ASPSRSPSTS PPEAPRPRPR PVLGAPRVAA QLSSSTDDEA DLFDDAAGSS GDEVLEEVSN GFFRIARVPP
0101: PPPSPSSDEA TAPSPPASAA GAGSSASSWE SEYFGAAEGA EEEEAAADVF VDAGAGSGLE EDGGVFAASA GAAAEGSLDG SFVSSMSVLD DGAAFSDLVN
0201: LSDMSLMNGG KQGAEDSGAE AVNGVEPEPS IGDAGGTRIV DASEGNAGGS QQEQVVVELP PAVNSSQQEE DAGLDLLNDD SDAKDTTPKH EVAELPHVIS
0301: STEAEATGPE IHNADSDAEH TTPKHEVVTH SDDASPQHVA TGDATVEPVE VHTNVDSSQF TVDAGHHKVD GETDGDHEPS GEPASVPIIG TNNALESPGK
0401: EMEDNVPASS LDDSDEDQLD DDYEAEELSG KETELFDYAA LAELLRAANR SPTQGKAKVF PVETSDSIQP SHTVVGVPRT SVASTHVLDA VADPENTMTD
0501: EEKKLYIKVD MARIKYLRLV YRLGYDTEHQ VPVQVLYRLS LVEGFRRIRM ADHSSELENA WSRALQLETE GTDDLEFSCN VLVLGKTGVG KSATINSIFG
0601: EDKSKTNAFL PATCFVKEIT GVVGGVKFRV IDTPGLGTTV RDGKSNRKML KSVKKYIKKC PPDIVLYVDR IDTQRQGADD LSLLQCITSV LGLSIWSKAI
0701: ITLTHSAADP LPEGPSGSPI NYEMIVTHRT HALQQSIRQT TNDPRIENPV ALVENHHLCR RNMEGEKVLP NGLTWKRLLL LLCYSLKMVA EIDTLSTRRA
0801: ASPRLFDLRL QMPPLPYFLS SLLQSREHPR RANEQKVESV GSDVDPDELL DDDQEDEEYD QLPPFKPLSK SQVAKLSKEQ QKLYFDEYDY RTKLLQKKQL
0901: KEQRRRLKEM KSEGNNYDVL VENDHPDDEY DNDRSLMPDW ALPSTFDSDD PVYRYRCLEP ATNLLARAVT NPEGWDHDCG FDGVSLQYSH EVAKTFPASM
1001: WVQVNKDKRE FTIHSESSIS AKHSEYASTL AGFDIQTMMD QLAYTLRGET KLRNTKNNAT TGGLSMTLAG NTMITGAKLE DKLSVGNWLT LVANAGAVSV
1101: KGDTAHGVNV VLNLLQKDYP IMGLGLATLG ASLVRWHKEW TMAANLDTQF SVGRTSNMAV HVDVNNKLTG RVSIKANSSE HLTIALLGVY SMAMYLWNRM
1201: HPRADPNNE
0101: PPPSPSSDEA TAPSPPASAA GAGSSASSWE SEYFGAAEGA EEEEAAADVF VDAGAGSGLE EDGGVFAASA GAAAEGSLDG SFVSSMSVLD DGAAFSDLVN
0201: LSDMSLMNGG KQGAEDSGAE AVNGVEPEPS IGDAGGTRIV DASEGNAGGS QQEQVVVELP PAVNSSQQEE DAGLDLLNDD SDAKDTTPKH EVAELPHVIS
0301: STEAEATGPE IHNADSDAEH TTPKHEVVTH SDDASPQHVA TGDATVEPVE VHTNVDSSQF TVDAGHHKVD GETDGDHEPS GEPASVPIIG TNNALESPGK
0401: EMEDNVPASS LDDSDEDQLD DDYEAEELSG KETELFDYAA LAELLRAANR SPTQGKAKVF PVETSDSIQP SHTVVGVPRT SVASTHVLDA VADPENTMTD
0501: EEKKLYIKVD MARIKYLRLV YRLGYDTEHQ VPVQVLYRLS LVEGFRRIRM ADHSSELENA WSRALQLETE GTDDLEFSCN VLVLGKTGVG KSATINSIFG
0601: EDKSKTNAFL PATCFVKEIT GVVGGVKFRV IDTPGLGTTV RDGKSNRKML KSVKKYIKKC PPDIVLYVDR IDTQRQGADD LSLLQCITSV LGLSIWSKAI
0701: ITLTHSAADP LPEGPSGSPI NYEMIVTHRT HALQQSIRQT TNDPRIENPV ALVENHHLCR RNMEGEKVLP NGLTWKRLLL LLCYSLKMVA EIDTLSTRRA
0801: ASPRLFDLRL QMPPLPYFLS SLLQSREHPR RANEQKVESV GSDVDPDELL DDDQEDEEYD QLPPFKPLSK SQVAKLSKEQ QKLYFDEYDY RTKLLQKKQL
0901: KEQRRRLKEM KSEGNNYDVL VENDHPDDEY DNDRSLMPDW ALPSTFDSDD PVYRYRCLEP ATNLLARAVT NPEGWDHDCG FDGVSLQYSH EVAKTFPASM
1001: WVQVNKDKRE FTIHSESSIS AKHSEYASTL AGFDIQTMMD QLAYTLRGET KLRNTKNNAT TGGLSMTLAG NTMITGAKLE DKLSVGNWLT LVANAGAVSV
1101: KGDTAHGVNV VLNLLQKDYP IMGLGLATLG ASLVRWHKEW TMAANLDTQF SVGRTSNMAV HVDVNNKLTG RVSIKANSSE HLTIALLGVY SMAMYLWNRM
1201: HPRADPNNE
0001: MGDGTEFVVR SDREDKKLAE DRISDEQVVK NELVRSDEVR DDNEDEVFEE AIGSENDEQE EEEDPKRELF ESDDLPLVET LKSSMVEHEV EDFEEAVGDL
0101: DETSSNEGGV KDFTAVGESH GAGEAEFDVL ATKMNGDKGE GGGGGSYDKV ESSLDVVDTT ENATSTNTNG SNLAAEHVGI ENGKTHSFLG NGIASPKNKE
0201: VVAEVIPKDD GIEEPWNDGI EVDNWEERVD GIQTEQEVEE GEGTTENQFE KRTEEEVVEG EGTSKNLFEK QTEQDVVEGE GTSKDLFENG SVCMDSESEA
0301: ERNGETGAAY TSNIVTNASG DNEVSSAVTS SPLEESSSGE KGETEGDSTC LKPEQHLASS PHSYPESTEV HSNSGSPGVT SREHKPVQSA NGGHDVQSPQ
0401: PNKELEKQQS SRVHVDPEIT ENSHVETEPE VVSSVSPTES RSNPAALPPA RPAGLGRASP LLEPASRAPQ QSRVNGNGSH NQFQQAEDST TTEADEHDET
0501: REKLQLIRVK FLRLAHRLGQ TPHNVVVAQV LYRLGLAEQL RGRNGSRVGA FSFDRASAMA EQLEAAGQDP LDFSCTIMVL GKSGVGKSAT INSIFDEVKF
0601: CTDAFQMGTK RVQDVEGLVQ GIKVRVIDTP GLLPSWSDQA KNEKILNSVK AFIKKNPPDI VLYLDRLDMQ SRDSGDMPLL RTISDVFGPS IWFNAIVGLT
0701: HAASVPPDGP NGTASSYDMF VTQRSHVIQQ AIRQAAGDMR LMNPVSLVEN HSACRTNRAG QRVLPNGQVW KPHLLLLSFA SKILAEANAL LKLQDNIPGR
0801: PFAARSKAPP LPFLLSSLLQ SRPQPKLPEQ QYGDEEDEDD LEESSDSDEE SEYDQLPPFK SLTKAQMATL SKSQKKQYLD EMEYREKLLM KKQMKEERKR
0901: RKMFKKFAAE IKDLPDGYSE NVEEESGGPA SVPVPMPDLS LPASFDSDNP THRYRYLDSS NQWLVRPVLE THGWDHDIGY EGVNAERLFV VKEKIPISVS
1001: GQVTKDKKDA NVQLEMASSV KHGEGKSTSL GFDMQTVGKE LAYTLRSETR FNNFRRNKAA AGLSVTHLGD SVSAGLKVED KFIASKWFRI VMSGGAMTSR
1101: GDFAYGGTLE AQLRDKDYPL GRFLTTLGLS VMDWHGDLAI GGNIQSQVPI GRSSNLIARA NLNNRGAGQV SVRVNSSEQL QLAMVAIVPL FKKLLSYYYP
1201: QTQYGQ
0101: DETSSNEGGV KDFTAVGESH GAGEAEFDVL ATKMNGDKGE GGGGGSYDKV ESSLDVVDTT ENATSTNTNG SNLAAEHVGI ENGKTHSFLG NGIASPKNKE
0201: VVAEVIPKDD GIEEPWNDGI EVDNWEERVD GIQTEQEVEE GEGTTENQFE KRTEEEVVEG EGTSKNLFEK QTEQDVVEGE GTSKDLFENG SVCMDSESEA
0301: ERNGETGAAY TSNIVTNASG DNEVSSAVTS SPLEESSSGE KGETEGDSTC LKPEQHLASS PHSYPESTEV HSNSGSPGVT SREHKPVQSA NGGHDVQSPQ
0401: PNKELEKQQS SRVHVDPEIT ENSHVETEPE VVSSVSPTES RSNPAALPPA RPAGLGRASP LLEPASRAPQ QSRVNGNGSH NQFQQAEDST TTEADEHDET
0501: REKLQLIRVK FLRLAHRLGQ TPHNVVVAQV LYRLGLAEQL RGRNGSRVGA FSFDRASAMA EQLEAAGQDP LDFSCTIMVL GKSGVGKSAT INSIFDEVKF
0601: CTDAFQMGTK RVQDVEGLVQ GIKVRVIDTP GLLPSWSDQA KNEKILNSVK AFIKKNPPDI VLYLDRLDMQ SRDSGDMPLL RTISDVFGPS IWFNAIVGLT
0701: HAASVPPDGP NGTASSYDMF VTQRSHVIQQ AIRQAAGDMR LMNPVSLVEN HSACRTNRAG QRVLPNGQVW KPHLLLLSFA SKILAEANAL LKLQDNIPGR
0801: PFAARSKAPP LPFLLSSLLQ SRPQPKLPEQ QYGDEEDEDD LEESSDSDEE SEYDQLPPFK SLTKAQMATL SKSQKKQYLD EMEYREKLLM KKQMKEERKR
0901: RKMFKKFAAE IKDLPDGYSE NVEEESGGPA SVPVPMPDLS LPASFDSDNP THRYRYLDSS NQWLVRPVLE THGWDHDIGY EGVNAERLFV VKEKIPISVS
1001: GQVTKDKKDA NVQLEMASSV KHGEGKSTSL GFDMQTVGKE LAYTLRSETR FNNFRRNKAA AGLSVTHLGD SVSAGLKVED KFIASKWFRI VMSGGAMTSR
1101: GDFAYGGTLE AQLRDKDYPL GRFLTTLGLS VMDWHGDLAI GGNIQSQVPI GRSSNLIARA NLNNRGAGQV SVRVNSSEQL QLAMVAIVPL FKKLLSYYYP
1201: QTQYGQ
Arabidopsis Description
TOC132Translocase of chloroplast 132, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SLF3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.