Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX97270 | Canola | cytosol | 51.15 | 15.26 |
| KRH59116 | Soybean | nucleus | 95.42 | 10.08 |
| CDY50376 | Canola | cytosol | 51.91 | 9.76 |
| KRH43000 | Soybean | nucleus | 87.02 | 9.62 |
| PGSC0003DMT400029640 | Potato | cytosol | 71.76 | 9.46 |
| CDX91288 | Canola | cytosol | 44.27 | 7.38 |
| Bra018546.1-P | Field mustard | mitochondrion | 49.62 | 7.29 |
| VIT_07s0005g00180.t01 | Wine grape | plastid | 77.1 | 6.89 |
| Zm00001d010852_P002 | Maize | plastid | 63.36 | 6.88 |
| Solyc09g074940.1.1 | Tomato | plastid | 71.76 | 6.7 |
| Os05t0151400-01 | Rice | plastid | 65.65 | 6.58 |
| Zm00001d035812_P003 | Maize | plastid | 64.12 | 6.46 |
| KRH03616 | Soybean | mitochondrion | 38.93 | 6.41 |
| OQU77419 | Sorghum | nucleus | 64.89 | 6.37 |
| GSMUA_Achr9P31000_001 | Banana | cytosol | 52.67 | 6.32 |
| KRH20190 | Soybean | cytosol | 38.17 | 6.29 |
| OQU90674 | Sorghum | nucleus | 44.27 | 6.26 |
| Bra036261.1-P | Field mustard | nucleus | 72.52 | 6.11 |
| KRG94982 | Soybean | cytosol | 14.5 | 6.09 |
| KRH64901 | Soybean | cytosol | 14.5 | 6.07 |
| TraesCS1A01G093900.3 | Wheat | cytosol, nucleus, plastid | 64.89 | 5.97 |
| TraesCS1D01G102500.3 | Wheat | cytosol, nucleus, plastid | 64.89 | 5.96 |
| HORVU1Hr1G021840.9 | Barley | nucleus | 64.89 | 5.96 |
| TraesCS1B01G122000.4 | Wheat | cytosol, nucleus, plastid | 64.89 | 5.92 |
| AT4G02510.4 | Thale cress | nucleus | 67.18 | 5.85 |
| KRH24252 | Soybean | mitochondrion | 51.15 | 5.53 |
| GSMUA_Achr9P31010_001 | Banana | cytosol | 39.69 | 5.26 |
| HORVU5Hr1G117690.19 | Barley | plastid | 46.56 | 5.22 |
| TraesCS4A01G358400.1 | Wheat | plastid | 46.56 | 5.12 |
| Zm00001d034755_P001 | Maize | cytosol | 45.04 | 5.11 |
| Zm00001d012893_P002 | Maize | cytosol, plastid | 44.27 | 5.1 |
| TraesCS5D01G514500.1 | Wheat | cytosol, plastid | 46.56 | 5.05 |
| TraesCS5B01G514000.1 | Wheat | cytosol | 46.56 | 5.0 |
| Os03t0835100-00 | Rice | cytosol, plastid | 45.8 | 4.98 |
| KRH29257 | Soybean | endoplasmic reticulum | 51.15 | 4.9 |
| KRH02257 | Soybean | cytosol | 31.3 | 4.77 |
| GSMUA_Achr6P20360_001 | Banana | cytosol | 16.79 | 1.95 |
| Os01t0356800-00 | Rice | plastid | 19.08 | 0.47 |
| CDX97269 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EMBL:ACUP02007061 | EnsemblPlants:KRH30746 | EnsemblPlantsGene:GLYMA_11G204600 | Gene3D:3.40.50.300 | PANTHER:PTHR10903 | PANTHER:PTHR10903:SF39 |
| ProteinID:KRH30746 | ProteinID:KRH30746.1 | SEG:seg | UniParc:UPI00023CC57F | UniProt:K7LRA1 | MapMan:35.1 |
Description
hypothetical protein
Coordinates
chr11:+:28488591..28488986
Molecular Weight (calculated)
14957.6 Da
IEP (calculated)
4.586
GRAVY (calculated)
-0.741
Length
131 amino acids
Sequence
(BLAST)
(BLAST)
001: MNPVSLVENH PSCWKNRDGQ KVLPNGQSWR PLLLLLCYSM KILSEASNVS KTQESPFDQH RLFGFHPRSP PLPYLLSWLL QTRTYPKLPT DQGGADNGDS
101: DIEIVDLSDS DLDEDEDEYD QLPPFKPMKK S
101: DIEIVDLSDS DLDEDEDEYD QLPPFKPMKK S
0001: MDSKSVTPEP TNPFYASSGQ SGKTYASVVA AAAAAAADKE DGGAVSSAKE LDSSSEAVSG NSDKVGADDL SDSEKEKPNL VGDGKVSDEV DGSLKEDSTT
0101: PEATPKPEVV SGETIGVDDV SSLSPKPEAV SDGVGVVEEN KKVKEDVEDI KDDGESKIEN GSVDVDVKQA STDGESESKV KDVEEEDVGT KKDDEGESEL
0201: GGKVDVDDKS DNVIEEEGVE LTDKGDVIVN SSPVESVHVD VAKPGVVVVG DAEGSEELKI NADAETLEVA NKFDQIGDDD SGEFEPVSDK AIEEVEEKFT
0301: SESDSIADSS KLESVDTSAV EPEVVAAESG SEPKDVEKAN GLEKGMTYAE VIKAASAVAD NGTKEEESVL GGIVDDAEEG VKLNNKGDFV VDSSAIEAVN
0401: VDVAKPGVVV VGDVEVSEVL ETDGNIPDVH NKFDPIGQGE GGEVELESDK ATEEGGGKLV SEGDSMVDSS VVDSVDADIN VAEPGVVVVG AAKEAVIKED
0501: DKDDEVDKTI SNIEEPDDLT AAYDGNFELA VKEISEAAKV EPDEPKVGVE VEELPVSESL KVGSVDAEED SIPAAESQFE VRKVVEGDSA EEDENKLPVE
0601: DIVSSREFSF GGKEVDQEPS GEGVTRVDGS ESEEETEEMI FGSSEAAKQF LAELEKASSG IEAHSDEANI SNNMSDRIDG QIVTDSDEDV DTEDEGEEKM
0701: FDTAALAALL KAATGGGSSE GGNFTITSQD GTKLFSMDRP AGLSSSLRPL KPAAAPRANR SNIFSNSNVT MADETEINLS EEEKQKLEKL QSLRVKFLRL
0801: LQRLGHSAED SIAAQVLYRL ALLAGRQAGQ LFSLDAAKKK AVESEAEGNE ELIFSLNILV LGKAGVGKSA TINSILGNQI ASIDAFGLST TSVREISGTV
0901: NGVKITFIDT PGLKSAAMDQ STNAKMLSSV KKVMKKCPPD IVLYVDRLDT QTRDLNNLPL LRTITASLGT SIWKNAIVTL THAASAPPDG PSGTPLSYDV
1001: FVAQCSHIVQ QSIGQAVGDL RLMNPSLMNP VSLVENHPLC RKNREGVKVL PNGQTWRSQL LLLCYSLKVL SETNSLLRPQ EPLDHRKVFG FRVRSPPLPY
1101: LLSWLLQSRA HPKLPGDQGG DSVDSDIEID DVSDSEQEDG EDDEYDQLPP FKPLRKTQLA KLSNEQRKAY FEEYDYRVKL LQKKQWREEL KRMKEMKKNG
1201: KKLGESEFGY PGEEDDPENG APAAVPVPLP DMVLPPSFDS DNSAYRYRYL EPTSQLLTRP VLDTHGWDHD CGYDGVNAEH SLALASRFPA TATVQVTKDK
1301: KEFNIHLDSS VSAKHGENGS TMAGFDIQNV GKQLAYVVRG ETKFKNLRKN KTTVGGSVTF LGENIATGVK LEDQIALGKR LVLVGSTGTM RSQGDSAYGA
1401: NLEVRLREAD FPIGQDQSSF GLSLVKWRGD LALGANLQSQ VSVGRNSKIA LRAGLNNKMS GQITVRTSSS DQLQIALTAI LPIAMSIYKS IRPEATNDKY
1501: SMY
0101: PEATPKPEVV SGETIGVDDV SSLSPKPEAV SDGVGVVEEN KKVKEDVEDI KDDGESKIEN GSVDVDVKQA STDGESESKV KDVEEEDVGT KKDDEGESEL
0201: GGKVDVDDKS DNVIEEEGVE LTDKGDVIVN SSPVESVHVD VAKPGVVVVG DAEGSEELKI NADAETLEVA NKFDQIGDDD SGEFEPVSDK AIEEVEEKFT
0301: SESDSIADSS KLESVDTSAV EPEVVAAESG SEPKDVEKAN GLEKGMTYAE VIKAASAVAD NGTKEEESVL GGIVDDAEEG VKLNNKGDFV VDSSAIEAVN
0401: VDVAKPGVVV VGDVEVSEVL ETDGNIPDVH NKFDPIGQGE GGEVELESDK ATEEGGGKLV SEGDSMVDSS VVDSVDADIN VAEPGVVVVG AAKEAVIKED
0501: DKDDEVDKTI SNIEEPDDLT AAYDGNFELA VKEISEAAKV EPDEPKVGVE VEELPVSESL KVGSVDAEED SIPAAESQFE VRKVVEGDSA EEDENKLPVE
0601: DIVSSREFSF GGKEVDQEPS GEGVTRVDGS ESEEETEEMI FGSSEAAKQF LAELEKASSG IEAHSDEANI SNNMSDRIDG QIVTDSDEDV DTEDEGEEKM
0701: FDTAALAALL KAATGGGSSE GGNFTITSQD GTKLFSMDRP AGLSSSLRPL KPAAAPRANR SNIFSNSNVT MADETEINLS EEEKQKLEKL QSLRVKFLRL
0801: LQRLGHSAED SIAAQVLYRL ALLAGRQAGQ LFSLDAAKKK AVESEAEGNE ELIFSLNILV LGKAGVGKSA TINSILGNQI ASIDAFGLST TSVREISGTV
0901: NGVKITFIDT PGLKSAAMDQ STNAKMLSSV KKVMKKCPPD IVLYVDRLDT QTRDLNNLPL LRTITASLGT SIWKNAIVTL THAASAPPDG PSGTPLSYDV
1001: FVAQCSHIVQ QSIGQAVGDL RLMNPSLMNP VSLVENHPLC RKNREGVKVL PNGQTWRSQL LLLCYSLKVL SETNSLLRPQ EPLDHRKVFG FRVRSPPLPY
1101: LLSWLLQSRA HPKLPGDQGG DSVDSDIEID DVSDSEQEDG EDDEYDQLPP FKPLRKTQLA KLSNEQRKAY FEEYDYRVKL LQKKQWREEL KRMKEMKKNG
1201: KKLGESEFGY PGEEDDPENG APAAVPVPLP DMVLPPSFDS DNSAYRYRYL EPTSQLLTRP VLDTHGWDHD CGYDGVNAEH SLALASRFPA TATVQVTKDK
1301: KEFNIHLDSS VSAKHGENGS TMAGFDIQNV GKQLAYVVRG ETKFKNLRKN KTTVGGSVTF LGENIATGVK LEDQIALGKR LVLVGSTGTM RSQGDSAYGA
1401: NLEVRLREAD FPIGQDQSSF GLSLVKWRGD LALGANLQSQ VSVGRNSKIA LRAGLNNKMS GQITVRTSSS DQLQIALTAI LPIAMSIYKS IRPEATNDKY
1501: SMY
Arabidopsis Description
TOC159Translocase of chloroplast 159, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O81283]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.