Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G093900.3 | Wheat | cytosol, nucleus, plastid | 97.75 | 97.82 |
| TraesCS1B01G122000.4 | Wheat | cytosol, nucleus, plastid | 97.89 | 97.21 |
| HORVU1Hr1G021840.9 | Barley | nucleus | 94.74 | 94.67 |
| Os05t0151400-01 | Rice | plastid | 71.65 | 78.18 |
| Zm00001d010852_P002 | Maize | plastid | 64.84 | 76.55 |
| OQU77419 | Sorghum | nucleus | 69.12 | 73.78 |
| Zm00001d035812_P003 | Maize | plastid | 67.23 | 73.64 |
| KRH30746 | Soybean | cytosol | 5.96 | 64.89 |
| CDY50376 | Canola | cytosol | 31.72 | 64.85 |
| CDX97269 | Canola | cytosol | 2.88 | 62.12 |
| GSMUA_Achr9P31010_001 | Banana | cytosol | 42.53 | 61.27 |
| GSMUA_Achr9P31000_001 | Banana | cytosol | 43.23 | 56.41 |
| PGSC0003DMT400029640 | Potato | cytosol | 38.74 | 55.53 |
| CDX97270 | Canola | cytosol | 16.28 | 52.85 |
| CDX91288 | Canola | cytosol | 26.81 | 48.6 |
| KRH43000 | Soybean | nucleus | 39.79 | 47.85 |
| Bra018546.1-P | Field mustard | mitochondrion | 29.54 | 47.2 |
| KRH59116 | Soybean | nucleus | 40.77 | 46.85 |
| Solyc01g080780.2.1 | Tomato | nucleus | 34.6 | 44.74 |
| VIT_07s0005g00180.t01 | Wine grape | plastid | 44.63 | 43.41 |
| GSMUA_Achr6P20360_001 | Banana | cytosol | 33.68 | 42.44 |
| Solyc09g074940.1.1 | Tomato | plastid | 41.05 | 41.7 |
| AT4G02510.4 | Thale cress | nucleus | 42.81 | 40.59 |
| VIT_05s0020g01290.t01 | Wine grape | cytosol | 35.86 | 39.58 |
| TraesCS1D01G211300.1 | Wheat | cytosol, golgi | 29.82 | 39.57 |
| Bra036261.1-P | Field mustard | nucleus | 43.09 | 39.51 |
| PGSC0003DMT400016119 | Potato | cytosol, nucleus, plastid | 36.84 | 38.57 |
| TraesCS5D01G514500.1 | Wheat | cytosol, plastid | 32.42 | 38.21 |
| TraesCS5D01G120200.1 | Wheat | mitochondrion | 20.35 | 36.94 |
| TraesCS4D01G230000.1 | Wheat | cytosol | 6.95 | 30.37 |
| KRH02257 | Soybean | cytosol | 15.65 | 25.93 |
| Bra033515.1-P | Field mustard | cytosol | 14.67 | 18.97 |
| AT4G15810.1 | Thale cress | cytosol | 11.72 | 18.19 |
| CDY44175 | Canola | cytosol | 10.74 | 16.56 |
| CDY22896 | Canola | cytosol | 11.3 | 15.89 |
Protein Annotations
| MapMan:23.1.2.2 | Gene3D:3.40.50.300 | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 | GO:GO:0016817 | InterPro:G_AIG1 | InterPro:IPR006703 |
| InterPro:P-loop_NTPase | PFAM:PF04548 | PFAM:PF11886 | PFscan:PS51720 | PANTHER:PTHR10903 | PANTHER:PTHR10903:SF39 |
| SUPFAM:SSF52540 | TIGRFAMs:TIGR00993 | InterPro:TOC159_MAD | InterPro:Toc86_159 | EnsemblPlantsGene:TraesCS1D01G102500 | EnsemblPlants:TraesCS1D01G102500.3 |
| TIGR:cd01853 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr1D:-:90645399..90650029
Molecular Weight (calculated)
152376.0 Da
IEP (calculated)
4.101
GRAVY (calculated)
-0.538
Length
1425 amino acids
Sequence
(BLAST)
(BLAST)
0001: MATTDARVAP VADERPPAAD ADEAAAAEGA KSAGAAAAEV GGVGEGEEVR FEGKDRSFTG SEANNGGVVE AEDGGEVEAA VGDGKDAIER EEEEKEEEEA
0101: AAAKEEEGDR ELSVEDVKAA LLVQALVAAK SESDNGELGE GDASLPSPDT PVGDKKPELT DEPEESATLE AKEVDNVALD AELSEEKPEG EKPAEVAAGG
0201: KDDGEFDSEK AVTASTTSME AAEPEDKVAP TAEANGNLGG EAEAPAELVA VGGEEAPEAS LENEADVEDK AAKQEPESDA SPVVTDDGNR ADVEDEAAKP
0301: EPESDATPVQ VVDNGTVENH ANVEDEAAKL DLVNDASPVE NHANVEDEAA KPDQANDASP VVIDNGSLDY QANEKDEEAM PEPESDASPE VIDDISSESL
0401: VKLAPSSVDV LLTESNENAQ NAEDQVVASG TVENVGVEKP TEVESVVAGG DDVILSRELA PEPVKENNDD VDENEPAAEV VSHKEEVGDD EIVVAAAADD
0501: QKTVAAADDE DTGGEENEGA QVVTDREVEA VDDEIVLAAA DEEDGSGNEG DEDDDEVSFD RSPARVAIIE NSEAAKQIMK ELGEGSSSGS PVSGLSSSRE
0601: YTNSMDGQIV LDDSEDEDDD DDNEDDDEKG FDSAALAALL KAATGASPDG NITVSSQDGS RIFSMDRPAG LGSSAPSLRP TAPRQPARSN LFSPSELAVT
0701: AEPNDEMTEE EKKLHDKVEL IRVKFLRLVY KLGATPEETV AAQVLYRLSL AEGIRHGRQT NRAFSLENAR KKALLLEAEG KEDLSFSCNI LVLGKIGVGK
0801: SATINSIFGE VKSKTDAFGA ATTSVREIVG NVDGVKIRII ATPGLRPNVM DQGANRKILA SVKKYTKRCP PDIVLYVDRL DSLSRDLNDL PLLKTITSVL
0901: GSSIWFNAIV ALTHAASAPP EGLNGAPMTY EVLMAQRSHI IQQSIRQAAG DMRLMNPVAL VENHPSCRKN REGQKVLPNG QSWRHQMLLL CYSSKILSEA
1001: NSLLKLQDPS PGKLFGFRFR SPPLPFLLSS LLQSRAHPKL SPDQGGNEGD SDIDLDEYSD IEQDEDEEEY DQLPPFKPLT KAQLARLTKE QKNAYFDEYD
1101: YRVKLLQKKQ WKDELRRLKE MKKRGKSDMD AYGYASIAGE NDQDPPPENV SVPLPDMVLP PSFDCDNPTY RYRFLEPTST VLARPVLDAH GWDHDCGYDG
1201: VSVEESLALL NKFPGTVAVQ VTKDKKEFSI HLDSSISAKH GEDASSLAGF DIQTVGRQLA YILRGETKFK SIKKNKTTGG FSVTFLGDIV ATGLKVEDQL
1301: SVGKRLALVA STGAMRAQGD TAYGANLEAR LKDKDYPIGQ SLSTLGLSLM KWRRDLALGA NLQSQFSIGR GSKMAVRLGL NNKLSGQITV RTSTSEQVQI
1401: ALLGLVPVIA SIYRSFRPGE PSFAY
0101: AAAKEEEGDR ELSVEDVKAA LLVQALVAAK SESDNGELGE GDASLPSPDT PVGDKKPELT DEPEESATLE AKEVDNVALD AELSEEKPEG EKPAEVAAGG
0201: KDDGEFDSEK AVTASTTSME AAEPEDKVAP TAEANGNLGG EAEAPAELVA VGGEEAPEAS LENEADVEDK AAKQEPESDA SPVVTDDGNR ADVEDEAAKP
0301: EPESDATPVQ VVDNGTVENH ANVEDEAAKL DLVNDASPVE NHANVEDEAA KPDQANDASP VVIDNGSLDY QANEKDEEAM PEPESDASPE VIDDISSESL
0401: VKLAPSSVDV LLTESNENAQ NAEDQVVASG TVENVGVEKP TEVESVVAGG DDVILSRELA PEPVKENNDD VDENEPAAEV VSHKEEVGDD EIVVAAAADD
0501: QKTVAAADDE DTGGEENEGA QVVTDREVEA VDDEIVLAAA DEEDGSGNEG DEDDDEVSFD RSPARVAIIE NSEAAKQIMK ELGEGSSSGS PVSGLSSSRE
0601: YTNSMDGQIV LDDSEDEDDD DDNEDDDEKG FDSAALAALL KAATGASPDG NITVSSQDGS RIFSMDRPAG LGSSAPSLRP TAPRQPARSN LFSPSELAVT
0701: AEPNDEMTEE EKKLHDKVEL IRVKFLRLVY KLGATPEETV AAQVLYRLSL AEGIRHGRQT NRAFSLENAR KKALLLEAEG KEDLSFSCNI LVLGKIGVGK
0801: SATINSIFGE VKSKTDAFGA ATTSVREIVG NVDGVKIRII ATPGLRPNVM DQGANRKILA SVKKYTKRCP PDIVLYVDRL DSLSRDLNDL PLLKTITSVL
0901: GSSIWFNAIV ALTHAASAPP EGLNGAPMTY EVLMAQRSHI IQQSIRQAAG DMRLMNPVAL VENHPSCRKN REGQKVLPNG QSWRHQMLLL CYSSKILSEA
1001: NSLLKLQDPS PGKLFGFRFR SPPLPFLLSS LLQSRAHPKL SPDQGGNEGD SDIDLDEYSD IEQDEDEEEY DQLPPFKPLT KAQLARLTKE QKNAYFDEYD
1101: YRVKLLQKKQ WKDELRRLKE MKKRGKSDMD AYGYASIAGE NDQDPPPENV SVPLPDMVLP PSFDCDNPTY RYRFLEPTST VLARPVLDAH GWDHDCGYDG
1201: VSVEESLALL NKFPGTVAVQ VTKDKKEFSI HLDSSISAKH GEDASSLAGF DIQTVGRQLA YILRGETKFK SIKKNKTTGG FSVTFLGDIV ATGLKVEDQL
1301: SVGKRLALVA STGAMRAQGD TAYGANLEAR LKDKDYPIGQ SLSTLGLSLM KWRRDLALGA NLQSQFSIGR GSKMAVRLGL NNKLSGQITV RTSTSEQVQI
1401: ALLGLVPVIA SIYRSFRPGE PSFAY
0001: MGDGTEFVVR SDREDKKLAE DRISDEQVVK NELVRSDEVR DDNEDEVFEE AIGSENDEQE EEEDPKRELF ESDDLPLVET LKSSMVEHEV EDFEEAVGDL
0101: DETSSNEGGV KDFTAVGESH GAGEAEFDVL ATKMNGDKGE GGGGGSYDKV ESSLDVVDTT ENATSTNTNG SNLAAEHVGI ENGKTHSFLG NGIASPKNKE
0201: VVAEVIPKDD GIEEPWNDGI EVDNWEERVD GIQTEQEVEE GEGTTENQFE KRTEEEVVEG EGTSKNLFEK QTEQDVVEGE GTSKDLFENG SVCMDSESEA
0301: ERNGETGAAY TSNIVTNASG DNEVSSAVTS SPLEESSSGE KGETEGDSTC LKPEQHLASS PHSYPESTEV HSNSGSPGVT SREHKPVQSA NGGHDVQSPQ
0401: PNKELEKQQS SRVHVDPEIT ENSHVETEPE VVSSVSPTES RSNPAALPPA RPAGLGRASP LLEPASRAPQ QSRVNGNGSH NQFQQAEDST TTEADEHDET
0501: REKLQLIRVK FLRLAHRLGQ TPHNVVVAQV LYRLGLAEQL RGRNGSRVGA FSFDRASAMA EQLEAAGQDP LDFSCTIMVL GKSGVGKSAT INSIFDEVKF
0601: CTDAFQMGTK RVQDVEGLVQ GIKVRVIDTP GLLPSWSDQA KNEKILNSVK AFIKKNPPDI VLYLDRLDMQ SRDSGDMPLL RTISDVFGPS IWFNAIVGLT
0701: HAASVPPDGP NGTASSYDMF VTQRSHVIQQ AIRQAAGDMR LMNPVSLVEN HSACRTNRAG QRVLPNGQVW KPHLLLLSFA SKILAEANAL LKLQDNIPGR
0801: PFAARSKAPP LPFLLSSLLQ SRPQPKLPEQ QYGDEEDEDD LEESSDSDEE SEYDQLPPFK SLTKAQMATL SKSQKKQYLD EMEYREKLLM KKQMKEERKR
0901: RKMFKKFAAE IKDLPDGYSE NVEEESGGPA SVPVPMPDLS LPASFDSDNP THRYRYLDSS NQWLVRPVLE THGWDHDIGY EGVNAERLFV VKEKIPISVS
1001: GQVTKDKKDA NVQLEMASSV KHGEGKSTSL GFDMQTVGKE LAYTLRSETR FNNFRRNKAA AGLSVTHLGD SVSAGLKVED KFIASKWFRI VMSGGAMTSR
1101: GDFAYGGTLE AQLRDKDYPL GRFLTTLGLS VMDWHGDLAI GGNIQSQVPI GRSSNLIARA NLNNRGAGQV SVRVNSSEQL QLAMVAIVPL FKKLLSYYYP
1201: QTQYGQ
0101: DETSSNEGGV KDFTAVGESH GAGEAEFDVL ATKMNGDKGE GGGGGSYDKV ESSLDVVDTT ENATSTNTNG SNLAAEHVGI ENGKTHSFLG NGIASPKNKE
0201: VVAEVIPKDD GIEEPWNDGI EVDNWEERVD GIQTEQEVEE GEGTTENQFE KRTEEEVVEG EGTSKNLFEK QTEQDVVEGE GTSKDLFENG SVCMDSESEA
0301: ERNGETGAAY TSNIVTNASG DNEVSSAVTS SPLEESSSGE KGETEGDSTC LKPEQHLASS PHSYPESTEV HSNSGSPGVT SREHKPVQSA NGGHDVQSPQ
0401: PNKELEKQQS SRVHVDPEIT ENSHVETEPE VVSSVSPTES RSNPAALPPA RPAGLGRASP LLEPASRAPQ QSRVNGNGSH NQFQQAEDST TTEADEHDET
0501: REKLQLIRVK FLRLAHRLGQ TPHNVVVAQV LYRLGLAEQL RGRNGSRVGA FSFDRASAMA EQLEAAGQDP LDFSCTIMVL GKSGVGKSAT INSIFDEVKF
0601: CTDAFQMGTK RVQDVEGLVQ GIKVRVIDTP GLLPSWSDQA KNEKILNSVK AFIKKNPPDI VLYLDRLDMQ SRDSGDMPLL RTISDVFGPS IWFNAIVGLT
0701: HAASVPPDGP NGTASSYDMF VTQRSHVIQQ AIRQAAGDMR LMNPVSLVEN HSACRTNRAG QRVLPNGQVW KPHLLLLSFA SKILAEANAL LKLQDNIPGR
0801: PFAARSKAPP LPFLLSSLLQ SRPQPKLPEQ QYGDEEDEDD LEESSDSDEE SEYDQLPPFK SLTKAQMATL SKSQKKQYLD EMEYREKLLM KKQMKEERKR
0901: RKMFKKFAAE IKDLPDGYSE NVEEESGGPA SVPVPMPDLS LPASFDSDNP THRYRYLDSS NQWLVRPVLE THGWDHDIGY EGVNAERLFV VKEKIPISVS
1001: GQVTKDKKDA NVQLEMASSV KHGEGKSTSL GFDMQTVGKE LAYTLRSETR FNNFRRNKAA AGLSVTHLGD SVSAGLKVED KFIASKWFRI VMSGGAMTSR
1101: GDFAYGGTLE AQLRDKDYPL GRFLTTLGLS VMDWHGDLAI GGNIQSQVPI GRSSNLIARA NLNNRGAGQV SVRVNSSEQL QLAMVAIVPL FKKLLSYYYP
1201: QTQYGQ
Arabidopsis Description
TOC132Translocase of chloroplast 132, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SLF3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.