CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX70657	Canola	cytosol	46.97	10.69
CDX70551	Canola	cytosol	46.97	8.61
CDY55323	Canola	cytosol	37.88	8.42
CDY32453	Canola	cytosol	37.88	8.42
CDX89987	Canola	cytosol	37.88	8.39
CDY15228	Canola	cytosol	37.88	8.39
CDX91288	Canola	cytosol	98.48	8.27
CDY52130	Canola	cytosol, plastid	36.36	7.67
CDX80936	Canola	cytosol	36.36	7.67
CDX98810	Canola	cytosol	36.36	7.67
Bra018546.1-P	Field mustard	mitochondrion	100.0	7.4
CDY50376	Canola	cytosol	72.73	6.89
CDX78660	Canola	cytosol	63.64	6.33
GSMUA_Achr9P31010_001	Banana	cytosol	72.73	4.85
PGSC0003DMT400029640	Potato	cytosol	69.7	4.63
CDY66172	Canola	cytosol	66.67	4.46
GSMUA_Achr9P31000_001	Banana	cytosol	71.21	4.3
GSMUA_Achr6P20360_001	Banana	cytosol	71.21	4.16
CDX92086	Canola	cytosol, endoplasmic reticulum, vacuole	66.67	4.14
CDY43117	Canola	cytosol	66.67	3.99
KRH43000	Soybean	nucleus	69.7	3.88
CDX70641	Canola	cytosol	46.97	3.87
CDX92471	Canola	cytosol	45.45	3.83
CDY35813	Canola	cytosol	45.45	3.83
OQU90674	Sorghum	nucleus	53.03	3.78
CDX92087	Canola	cytosol	66.67	3.72
KRH59116	Soybean	nucleus	68.18	3.63
Os03t0835100-00	Rice	cytosol, plastid	63.64	3.48
Zm00001d010852_P002	Maize	plastid	63.64	3.48
VIT_07s0005g00180.t01	Wine grape	plastid	74.24	3.34
Solyc09g074940.1.1	Tomato	plastid	69.7	3.28
HORVU5Hr1G117690.19	Barley	plastid	57.58	3.25
Zm00001d035812_P003	Maize	plastid	63.64	3.23
CDX70178	Canola	cytosol	36.36	3.16
OQU77419	Sorghum	nucleus	63.64	3.15
TraesCS5D01G514500.1	Wheat	cytosol, plastid	57.58	3.14
Os05t0151400-01	Rice	plastid	62.12	3.14
Zm00001d012893_P002	Maize	cytosol, plastid	53.03	3.08
TraesCS5B01G514000.1	Wheat	cytosol	56.06	3.04
TraesCS4A01G358400.1	Wheat	plastid	54.55	3.02
Zm00001d034755_P001	Maize	cytosol	51.52	2.95
TraesCS1A01G093900.3	Wheat	cytosol, nucleus, plastid	62.12	2.88
TraesCS1D01G102500.3	Wheat	cytosol, nucleus, plastid	62.12	2.88
HORVU1Hr1G021840.9	Barley	nucleus	62.12	2.88
TraesCS1B01G122000.4	Wheat	cytosol, nucleus, plastid	62.12	2.86
CDX70658	Canola	cytosol	4.55	2.34
CDX70550	Canola	cytosol	3.03	0.71
Os01t0356800-00	Rice	plastid	54.55	0.67
CDX70659	Canola	cytosol	0.0	0.0
KRH30746	Soybean	cytosol	0.0	0.0
CDX97270	Canola	cytosol	0.0	0.0
CDX98809	Canola	cytosol	0.0	0.0
CDY22896	Canola	cytosol	0.0	0.0
CDY44175	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:CDX97269	EnsemblPlantsGene:GSBRNA2T00104302001	Gene3D:3.40.50.300	GO:A0A078E951	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005525	InterPro:G_AIG1	InterPro:IPR006703	PANTHER:PTHR10903	PANTHER:PTHR10903:SF39
PFscan:PS51720	ProteinID:CDX97269	ProteinID:CDX97269.1	UniParc:UPI0004EDD959	MapMan:35.1	:

Description

BnaA02g20600D

Coordinates

chrLK031898:+:455710..455910

Molecular Weight (calculated)

7322.7 Da

IEP (calculated)

4.176

GRAVY (calculated)

-0.192

Length

66 amino acids

Sequence
(BLAST)

1: MKKFPPDVVL YVDRLDDAQN NLPLLRTITD SLGPSIWENA IVILTHSASA PPDDPSGTPL KYEEFV

Best Arabidopsis Sequence Match ( AT4G02510.1 )
(BLAST)

0001: MDSKSVTPEP TNPFYASSGQ SGKTYASVVA AAAAAAADKE DGGAVSSAKE LDSSSEAVSG NSDKVGADDL SDSEKEKPNL VGDGKVSDEV DGSLKEDSTT
0101: PEATPKPEVV SGETIGVDDV SSLSPKPEAV SDGVGVVEEN KKVKEDVEDI KDDGESKIEN GSVDVDVKQA STDGESESKV KDVEEEDVGT KKDDEGESEL
0201: GGKVDVDDKS DNVIEEEGVE LTDKGDVIVN SSPVESVHVD VAKPGVVVVG DAEGSEELKI NADAETLEVA NKFDQIGDDD SGEFEPVSDK AIEEVEEKFT
0301: SESDSIADSS KLESVDTSAV EPEVVAAESG SEPKDVEKAN GLEKGMTYAE VIKAASAVAD NGTKEEESVL GGIVDDAEEG VKLNNKGDFV VDSSAIEAVN
0401: VDVAKPGVVV VGDVEVSEVL ETDGNIPDVH NKFDPIGQGE GGEVELESDK ATEEGGGKLV SEGDSMVDSS VVDSVDADIN VAEPGVVVVG AAKEAVIKED
0501: DKDDEVDKTI SNIEEPDDLT AAYDGNFELA VKEISEAAKV EPDEPKVGVE VEELPVSESL KVGSVDAEED SIPAAESQFE VRKVVEGDSA EEDENKLPVE
0601: DIVSSREFSF GGKEVDQEPS GEGVTRVDGS ESEEETEEMI FGSSEAAKQF LAELEKASSG IEAHSDEANI SNNMSDRIDG QIVTDSDEDV DTEDEGEEKM
0701: FDTAALAALL KAATGGGSSE GGNFTITSQD GTKLFSMDRP AGLSSSLRPL KPAAAPRANR SNIFSNSNVT MADETEINLS EEEKQKLEKL QSLRVKFLRL
0801: LQRLGHSAED SIAAQVLYRL ALLAGRQAGQ LFSLDAAKKK AVESEAEGNE ELIFSLNILV LGKAGVGKSA TINSILGNQI ASIDAFGLST TSVREISGTV
0901: NGVKITFIDT PGLKSAAMDQ STNAKMLSSV KKVMKKCPPD IVLYVDRLDT QTRDLNNLPL LRTITASLGT SIWKNAIVTL THAASAPPDG PSGTPLSYDV
1001: FVAQCSHIVQ QSIGQAVGDL RLMNPSLMNP VSLVENHPLC RKNREGVKVL PNGQTWRSQL LLLCYSLKVL SETNSLLRPQ EPLDHRKVFG FRVRSPPLPY
1101: LLSWLLQSRA HPKLPGDQGG DSVDSDIEID DVSDSEQEDG EDDEYDQLPP FKPLRKTQLA KLSNEQRKAY FEEYDYRVKL LQKKQWREEL KRMKEMKKNG
1201: KKLGESEFGY PGEEDDPENG APAAVPVPLP DMVLPPSFDS DNSAYRYRYL EPTSQLLTRP VLDTHGWDHD CGYDGVNAEH SLALASRFPA TATVQVTKDK
1301: KEFNIHLDSS VSAKHGENGS TMAGFDIQNV GKQLAYVVRG ETKFKNLRKN KTTVGGSVTF LGENIATGVK LEDQIALGKR LVLVGSTGTM RSQGDSAYGA
1401: NLEVRLREAD FPIGQDQSSF GLSLVKWRGD LALGANLQSQ VSVGRNSKIA LRAGLNNKMS GQITVRTSSS DQLQIALTAI LPIAMSIYKS IRPEATNDKY
1501: SMY

Arabidopsis Description

TOC159Translocase of chloroplast 159, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O81283]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.