CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 3
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX70178	Canola	cytosol	96.0	56.92
CDX70659	Canola	cytosol	2.44	10.19
CDX70550	Canola	cytosol	3.78	6.01
CDX97270	Canola	cytosol	3.78	3.87
CDX70641	Canola	cytosol	5.56	3.12
CDX78660	Canola	cytosol	3.78	2.56
CDY43117	Canola	cytosol	5.33	2.17
CDX91288	Canola	cytosol	3.78	2.16
CDY50376	Canola	cytosol	3.33	2.15
CDY35813	Canola	cytosol	3.56	2.04
CDX92471	Canola	cytosol	3.56	2.04
CDY66172	Canola	cytosol	4.44	2.03
CDX92087	Canola	cytosol	4.67	1.78
CDX92086	Canola	cytosol, endoplasmic reticulum, vacuole	3.33	1.41
CDY22896	Canola	cytosol	3.11	1.38
CDY44175	Canola	cytosol	2.67	1.3
CDX98810	Canola	cytosol	0.67	0.96
CDX80936	Canola	cytosol	0.67	0.96
CDY52130	Canola	cytosol, plastid	0.67	0.96
KXG39799	Sorghum	cytosol	0.67	0.92
Os03t0240500-01	Rice	plastid	0.67	0.92
Zm00001d028373_P002	Maize	cytosol	0.67	0.9
Zm00001d047965_P002	Maize	cytosol	0.67	0.85
GSMUA_AchrUn_...	Banana	cytosol	0.44	0.64
TraesCS4A01G072800.1	Wheat	golgi, plastid	0.44	0.61
TraesCS4B01G228900.1	Wheat	cytosol	0.44	0.61
TraesCS4D01G230000.1	Wheat	cytosol	0.44	0.61
HORVU4Hr1G064110.2	Barley	cytosol	0.44	0.56
CDX70657	Canola	cytosol	0.0	0.0
CDX70658	Canola	cytosol	0.0	0.0
CDY55323	Canola	cytosol	0.0	0.0
CDX70551	Canola	cytosol	0.0	0.0
GSMUA_Achr1P22210_001	Banana	cytosol	0.0	0.0
CDY32453	Canola	cytosol	0.0	0.0
CDX89987	Canola	cytosol	0.0	0.0
CDY15228	Canola	cytosol	0.0	0.0
CDX97269	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:CDX98809	EnsemblPlantsGene:GSBRNA2T00106907001	Gene3D:2.60.120.260	InterPro:Galactose-bd-like_sf	InterPro:IPR008979	InterPro:IPR012919
InterPro:SUN_dom	ncoils:Coil	PANTHER:PTHR12911	PANTHER:PTHR12911:SF38	PFAM:PF07738	PFscan:PS51469
ProteinID:CDX98809	ProteinID:CDX98809.1	SEG:seg	UniParc:UPI0004EEB1BD	MapMan:20.4.2.1.1	:

Description

BnaC09g50260DProtein SAD1/UNC-84 domain protein 1 [Source:Projected from Arabidopsis thaliana (AT5G04990) UniProtKB/Swiss-Prot;Acc:Q9FF75]

Coordinates

chrLK031907:-:88534..90588

Molecular Weight (calculated)

49220.0 Da

IEP (calculated)

7.258

GRAVY (calculated)

-0.450

Length

450 amino acids

Sequence
(BLAST)

001: MSASTMSLTA TPSKRTPIVA GDKKSNFDFP PSESLANGEA KDPILAEAVT DRSKGQDLGP VTRRVSSTTN TTSATQRRTR KVSAPRSEKA RWKRVARIFA
101: KQLVALLIIV GLIQAARKVL APSSSSSSSS FETEMAFSGL ESRIAEVDGL VKATTSTMQV QVELLDKKIE KEAKALRQEL EAKASAFHNE VKKIESKTES
201: LEKSVEEVNA KPFVSRDEFE RVYEELKKGN VDDSAFSEVS IDELRAYARD MMEKEIEKHA ADGLGRVDYA LASGGGFVMG HSEPYLVGKG SSWFATTGRK
301: AHTNAVKMLS PSFGEPGQCF ALKGSSGYVQ IRLRGPIVPE AFTLEHVAKS VAYDRSSAPK DCVVSGWLQG KGQESSEETE KMQLLTEFTY DLERSNAQTF
401: NVLDSSDSGL VDTVRLDFTS NHGSNSHTCI YRFRVHGRAP DPVPIVETEL

Best Arabidopsis Sequence Match ( AT5G04990.1 )
(BLAST)

001: MSASTVSITA NTAAATRRTP ILAGEKKSNF DYPQSESLAN GGVGEAGGTS RDLSRGEATL DRSQGQDLGP VTRRSVSAAT GTNTTATQRR TRKVATPKSE
101: KARWKTVVRI FAKQLGALLI IVGLIQLTRK MILKASSPSS PISSYETEMA FSGLESRIAE VDGLVKATTN SMQVQVELLD KKMEREAKVL RQEIERKASA
201: FQSELKKIES RTESLEKSVD EVNAKPWVTK DELERIYEEL KKGNVDDSAF SEISIDELRA YARDIMEKEI EKHAADGLGR VDYALASGGA FVMEHSDPYL
301: VGKGSSWFAT TMRRAHTNAV KMLSPSFGEP GQCFPLKGSE GYVQIRLRGP IIPEAFTLEH VAKSVAYDRS SAPKDCRVSG SLQGPESSAE TENMQLLTEF
401: TYDLDRSNAQ TFNILESSSS GLIDTVRLDF TSNHGSDSHT CIYRFRVHGR APDPVPVVGT NLDQDSSPES E

Arabidopsis Description

SUN1SUN domain-containing protein 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FF75]
SUBAcon: [plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.