Factsheet for HORVU4Hr1G064110.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 1
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G043900.4
HORVU1Hr1G043940.3
HORVU2Hr1G024550.6
HORVU4Hr1G019530.1
HORVU4Hr1G064110.2
HORVU5Hr1G032550.3
HORVU5Hr1G048520.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G02280.1	HORVU4Hr1G064110.2	AT1G02280.1	12869544
AT1G02280.1	HORVU1Hr1G043900.4	AT1G06950.1	15829604
AT1G02280.1	HORVU1Hr1G043940.3	AT1G06950.1	15829604
AT1G02280.1	HORVU5Hr1G048520.1	AT1G06950.1	15829604
AT1G02280.1	HORVU4Hr1G019530.1	AT1G35670.1	19130088
AT1G02280.1	HORVU5Hr1G032550.3	AT1G35670.1	19130088
AT1G02280.1	HORVU2Hr1G024550.6	AT1G63900.1	23118188
AT1G02280.1	HORVU4Hr1G019530.1	AT4G09570.1	19130088
AT1G02280.1	HORVU5Hr1G032550.3	AT4G09570.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G228900.1	Wheat	cytosol	90.73	99.08
TraesCS4A01G072800.1	Wheat	golgi, plastid	90.73	99.08
TraesCS4D01G230000.1	Wheat	cytosol	90.45	98.77
Os03t0240500-01	Rice	plastid	82.02	89.3
KXG39799	Sorghum	cytosol	80.34	87.73
Zm00001d028373_P002	Maize	cytosol	79.78	85.03
Zm00001d047965_P002	Maize	cytosol	78.37	78.81
GSMUA_Achr1P22210_001	Banana	cytosol	29.21	74.82
VIT_02s0109g00360.t01	Wine grape	cytosol	58.99	67.74
VIT_16s0039g02670.t01	Wine grape	cytosol	58.15	67.21
PGSC0003DMT400013477	Potato	cytosol	56.74	67.11
PGSC0003DMT400030414	Potato	cytosol, plastid	54.78	64.78
Solyc05g052160.2.1	Tomato	plastid	53.93	63.79
Solyc03g095220.2.1	Tomato	plastid	46.35	63.71
AT5G05000.3	Thale cress	cytosol	53.93	61.34
KRG94982	Soybean	cytosol	53.65	61.22
CDX98810	Canola	cytosol	53.65	61.02
CDY52130	Canola	cytosol, plastid	53.37	60.7
KRH64901	Soybean	cytosol	52.81	60.06
CDX80936	Canola	cytosol	52.53	59.74
CDY55323	Canola	cytosol	48.88	58.59
Bra032612.1-P	Field mustard	cytosol	48.31	57.91
CDY32453	Canola	cytosol	48.31	57.91
Bra033311.1-P	Field mustard	cytosol	47.75	57.05
CDX89987	Canola	cytosol	47.75	57.05
AT1G02280.1	Thale cress	cytosol	47.47	56.9
CDY15228	Canola	cytosol	47.19	56.38
CDX70178	Canola	cytosol	53.93	25.3
Bra009405.1-P	Field mustard	cytosol	50.84	24.3
HORVU1Hr1G053280.1	Barley	mitochondrion	23.31	11.91
HORVU5Hr1G031380.1	Barley	mitochondrion	23.03	10.39
HORVU1Hr1G021840.9	Barley	nucleus	28.37	7.08
HORVU5Hr1G117690.19	Barley	plastid	22.75	6.93
CDX98809	Canola	cytosol	0.56	0.44

Protein Annotations

MapMan:23.1.2.3	UniProt:A0A287PCU3	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006810	GO:GO:0006886	GO:GO:0008150	GO:GO:0009507	GO:GO:0009527	GO:GO:0009536
GO:GO:0009707	GO:GO:0015031	GO:GO:0015450	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0046872	GO:GO:0071806	InterPro:G_AIG1	EnsemblPlantsGene:HORVU4Hr1G064110	EnsemblPlants:HORVU4Hr1G064110.2	InterPro:IPR006703
InterPro:P-loop_NTPase	PFAM:PF04548	PIRSF:PIRSF038134	PFscan:PS51720	PANTHER:PTHR10903	PANTHER:PTHR10903:SF43
SUPFAM:SSF52540	TIGRFAMs:TIGR00991	InterPro:Toc34	UniParc:UPI000B486C96	SEG:seg	:

Description

Translocase of chloroplast [Source:UniProtKB/TrEMBL;Acc:A0A287PCU3]

Coordinates

chrchr4H:-:537437339..537440992

Molecular Weight (calculated)

39844.3 Da

IEP (calculated)

9.566

GRAVY (calculated)

-0.157

Length

356 amino acids

Sequence
(BLAST)

001: MAAPIPREWV GLQQFPAATQ TKLHELLGKL KEENVSTLTI LVMGKGGVGK SSTVNSIVGE RVANVSAFQS EGLRPMMCSR TRAGFTLNII DTPGLIEGGY
101: INEQAVEIIK RFLLEKTIDV LLYVDRLDTY RMDTLDEQVI RAITSSLGKA IWRRTLVVLT HAQLSPPDGI DYNDFLARRS ESLVRYIRSG AGIGKREYAD
201: FPLPIALAEN SGRCKTNENG AKVCLFHVVF DLHLVVPSVF DFQLRMSYNH VQILPDGTPW IPNLMKEITI VVSNGSRSIH VDQKLIDGPN PNNRWKKYIP
301: LILAVQYFFV VKGIRRAIHS DISNGKLDDW EQRYRDLVGS GNPVDQKVSS SRNPKA

Best Arabidopsis Sequence Match ( AT5G05000.1 )
(BLAST)

001: MAALQTLREW IGIQQFPPAT QSKLLEILGK YKEEDVSSLT VLVMGKGGVG KSSTVNSVIG EKAAAVSTFQ SEGLRPTLVS RTRSGFTLNI IDTPGLIEGG
101: YVNDQAINII KRFLLNMTID VLLYVDRLDV YRVDDLDRQV VGAITDAFGK EIWKKSALVL THAQFSPPDG LNYNHFVSKR SNALLKVIQT GAQLKKQDLQ
201: GFSIPVILVE NSGRCHKNES DEKILPCGTS WIPNLFNKIT EISFNGNKAI HVDKKLVEGP NPNERGKKLI PLMFAFQYLL VMKPLVRAIK SDVSRESKPA
301: WELRDSGLAS RRS

Arabidopsis Description

TOC34Translocase of chloroplast 34, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q38906]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.