Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 1
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU2Hr1G076790.7 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G06950.1 | HORVU2Hr1G076790.7 | AT5G16620.1 | 15829604 |
| AT1G06950.1 | HORVU2Hr1G076790.7 | AT5G16620.1 | 17535810 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G048520.1 | Barley | cytosol | 4.37 | 97.92 |
| TraesCS1B01G182500.1 | Wheat | plastid | 91.54 | 95.82 |
| TraesCS1A01G165800.1 | Wheat | golgi | 91.45 | 95.81 |
| TraesCS1D01G174900.1 | Wheat | plastid | 90.24 | 94.55 |
| Os10t0492000-01 | Rice | plastid | 45.26 | 82.12 |
| OQU91582 | Sorghum | plastid | 73.05 | 77.21 |
| Zm00001d032615_P002 | Maize | mitochondrion | 72.58 | 77.1 |
| HORVU1Hr1G043900.4 | Barley | plastid | 29.93 | 72.04 |
| Os10t0492101-00 | Rice | plastid | 10.59 | 65.14 |
| GSMUA_Achr11P... | Banana | plastid | 55.85 | 59.04 |
| Zm00001d004430_P001 | Maize | cytosol | 5.2 | 58.33 |
| KRH72787 | Soybean | endoplasmic reticulum | 52.97 | 57.29 |
| VIT_06s0004g07730.t01 | Wine grape | plastid | 53.53 | 57.2 |
| KRH17141 | Soybean | endoplasmic reticulum | 52.6 | 56.83 |
| KRH30145 | Soybean | cytosol | 6.69 | 56.69 |
| CDY10236 | Canola | plastid | 50.56 | 54.13 |
| CDX86508 | Canola | plastid | 50.93 | 54.1 |
| CDY15593 | Canola | plastid | 50.84 | 54.0 |
| CDY54889 | Canola | plastid | 50.19 | 53.84 |
| Bra015538.1-P | Field mustard | plastid | 50.19 | 53.84 |
| Bra030666.1-P | Field mustard | plastid | 50.65 | 53.8 |
| AT1G06950.1 | Thale cress | plastid | 50.74 | 53.74 |
| Solyc09g031780.2.1 | Tomato | plastid | 50.0 | 53.53 |
| KRG98182 | Soybean | plastid | 48.79 | 53.03 |
| CDY06840 | Canola | cytosol, mitochondrion | 4.46 | 50.53 |
| CDX94311 | Canola | cytosol | 14.78 | 38.78 |
Protein Annotations
| EnsemblPlants:HORVU1Hr1G043940.3 | EnsemblPlantsGene:HORVU1Hr1G043940 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0009507 | GO:GO:0009536 | InterPro:TIC110 | PANTHER:PTHR34935 | PFAM:PF16940 | SEG:seg |
| UniParc:UPI000B463E1D | UniProt:A0A287FCC2 | MapMan:23.1.3.2 | : | : | : |
Description
No Description!
Coordinates
chrchr1H:-:320544795..320555164
Molecular Weight (calculated)
117957.0 Da
IEP (calculated)
6.270
GRAVY (calculated)
-0.364
Length
1076 amino acids
Sequence
(BLAST)
(BLAST)
0001: PSQPPEPPGV APPRPAPTNP HPSSQRYPHP PPRLPLLRPS ARRRRPSRRD PTMELSLVSA RLSPRAAASP LLFAPLKPLP LLRFPPRKRT AFARLRSRRP
0101: RRVAASGDGE GEADAADRDE EVFGGRTGQV FGGRRELTGV QPLVEALPPV ARTAAELAVA AAALAAGXGG GSRAAAFAGA AVLGGASVAA AVAVNSVVPE
0201: VAAVGLHNYV AGHDDPTKLE ASEVEAIANK YGVSTQDAAF KTELCDLYGS FLYSVLPPGD EDLKGDEVEV ITKFKRGLGL DDVDAANMHM EIGRRLYRER
0301: LETRDRDADI EQRRAFQKLI YVSNLVFGDA SAFLLPWKRL FGITDSQIDI AMRDNAKNLY AIQLKSIGRG LDIGTLIEVR RAQLACKLSD EIAADMFKEH
0401: AKKLIQENIS SALDILKSRN KATNSPTQVM EEVKCVLAFN NLLTVLSKHP QGDRFARGLG PISLAGEQDH DRRAGDLKTL YRAYATDVLS DGPVDNEKLT
0501: PLNDLRNIFG LGKREAEAII SDVKSQAYRK RLAKSFNTDL AAAPSKASFL QNLCEELQFD PELASKMHED IYRQKLQQFV ADGELSKDET EALTAFQVRL
0601: CIPQETVDAA HGDICGQLFE KVVKEAILSV DGYNADRREA VRKAAQSLNL KKEAAMTIFS KAVRKLFLNY IQKAKAAGNR IEQAKELKKL ISFNTVVVSE
0701: LLADIKGELT TAEPATSSAT SEPETTESEE EDEDYEWESL ETLKKTRPDK ELKEKLGKSS QKEITLKDDL PLRDRAELYQ TYLMFCITGE TTNVSFGTAI
0801: STKKDDSEYL MLKQLGHILG LTGKEAQDVH IKLAEKAFVQ QAEVVLADGK LTESKADQLA KIQKQVGLPS EHAQKIIKSI TTTKLSSAIE ASISRGQIGI
0901: QQVRGLKDAN FQLDSLISEP LRETIYKKCA EEIFSSGTGE FDEEEVYVKM PADLIISAEK ARSIVQDIAK VRLENALVQA VALLRQKKRD GVISSLNDLL
1001: ACDAAVPASK PLSWPTPREL DDLYCVYMKS IPKQDKLSRL QYLLDISAEK AEDLRDAATA GTLPQTAGQE EEELAF
0101: RRVAASGDGE GEADAADRDE EVFGGRTGQV FGGRRELTGV QPLVEALPPV ARTAAELAVA AAALAAGXGG GSRAAAFAGA AVLGGASVAA AVAVNSVVPE
0201: VAAVGLHNYV AGHDDPTKLE ASEVEAIANK YGVSTQDAAF KTELCDLYGS FLYSVLPPGD EDLKGDEVEV ITKFKRGLGL DDVDAANMHM EIGRRLYRER
0301: LETRDRDADI EQRRAFQKLI YVSNLVFGDA SAFLLPWKRL FGITDSQIDI AMRDNAKNLY AIQLKSIGRG LDIGTLIEVR RAQLACKLSD EIAADMFKEH
0401: AKKLIQENIS SALDILKSRN KATNSPTQVM EEVKCVLAFN NLLTVLSKHP QGDRFARGLG PISLAGEQDH DRRAGDLKTL YRAYATDVLS DGPVDNEKLT
0501: PLNDLRNIFG LGKREAEAII SDVKSQAYRK RLAKSFNTDL AAAPSKASFL QNLCEELQFD PELASKMHED IYRQKLQQFV ADGELSKDET EALTAFQVRL
0601: CIPQETVDAA HGDICGQLFE KVVKEAILSV DGYNADRREA VRKAAQSLNL KKEAAMTIFS KAVRKLFLNY IQKAKAAGNR IEQAKELKKL ISFNTVVVSE
0701: LLADIKGELT TAEPATSSAT SEPETTESEE EDEDYEWESL ETLKKTRPDK ELKEKLGKSS QKEITLKDDL PLRDRAELYQ TYLMFCITGE TTNVSFGTAI
0801: STKKDDSEYL MLKQLGHILG LTGKEAQDVH IKLAEKAFVQ QAEVVLADGK LTESKADQLA KIQKQVGLPS EHAQKIIKSI TTTKLSSAIE ASISRGQIGI
0901: QQVRGLKDAN FQLDSLISEP LRETIYKKCA EEIFSSGTGE FDEEEVYVKM PADLIISAEK ARSIVQDIAK VRLENALVQA VALLRQKKRD GVISSLNDLL
1001: ACDAAVPASK PLSWPTPREL DDLYCVYMKS IPKQDKLSRL QYLLDISAEK AEDLRDAATA GTLPQTAGQE EEELAF
0001: MNPSLVTAIN APISPSPRSP LLSHFLPTLP HRFSKSECLS RRRYRVSFPR SSAASSDQLS VSTQAKNPGI HGNKKELTGL QPIVEKMTPP VRLATSAVVL
0101: AASLATGYGL GLRLAGSRNI AFGGAAVAGA AGGAVVYALN SAVPEVAAIS LHNYVAEFED PASVTKDDVE KIADRYGVNK GDEAFQAEIC DIYCRYVTSV
0201: LPTEGQSLKG DEVAKIVKFK NALGIDEPDA AAMHMEIGRR IFRQRLETGE REGDAEQRRA FMRLVYVSAL VFGDASSFLL PWKRVLKVTD AQVEIAIREN
0301: AKQLYAERLK LVGRDINVEN LVDLRKSQLS FKLSDELAED LFREHTRKVV VENISSALSI LKSRTRAAKS LASVVEELEK VLEFNNLLVS LKSHSEADQF
0401: ARGVGPISLI GDESDFERRM DDLKLLYRAY VTDALSGGRL EENKLVAMSQ LRNILGLGKR EAEAISVDVT SKSYRKRLAN AVSSGDLEAQ DSKAKYLQKL
0501: CEELHFDAQK AGAIHEEIYR QKLQQCVTDG ELSDDNVAAL LRLRVMLCIP QQTVDTAHAE ICGTIFEKVV RDAISSGVDG YDAETRKSVR KAAHGLRLSR
0601: ETAMSIASKA VRRVFTNYIR RARAAENRTD SAKELKKMIA FNTLVVTEMV ADIKGESSDK APEEDPVQEK EEDDEDEEWG SLESLRKTRP DKELAEKMGK
0701: PGQTEITLKD DLPDRDRIDL YKTYLLYCVT GEVTRIPFGA QITTKRDDSE YLLLNQLGGI LGLSSKEIVN IHVGLAEQAF RQQAEVILAD GQLTKARVEQ
0801: LDELQKQVGL PQPQAEKVIK NITTTKMANA IETAVNQGRL NIKQIRELKE ANVSLDSMIA VSLREKLFKK TVSDIFSSGT GEFDETEVYQ TIPSDLSIDV
0901: EKAKRVVHDL AQSRLSNSLV QAVALLRQRN SKGVVLSLND LLACDKAVPA EPMSWEVSEE LSDLYAIYSK SDPKPAPEKV LRLQYLLGID DSTATALREM
1001: EDGALSSAAE EGNFVF
0101: AASLATGYGL GLRLAGSRNI AFGGAAVAGA AGGAVVYALN SAVPEVAAIS LHNYVAEFED PASVTKDDVE KIADRYGVNK GDEAFQAEIC DIYCRYVTSV
0201: LPTEGQSLKG DEVAKIVKFK NALGIDEPDA AAMHMEIGRR IFRQRLETGE REGDAEQRRA FMRLVYVSAL VFGDASSFLL PWKRVLKVTD AQVEIAIREN
0301: AKQLYAERLK LVGRDINVEN LVDLRKSQLS FKLSDELAED LFREHTRKVV VENISSALSI LKSRTRAAKS LASVVEELEK VLEFNNLLVS LKSHSEADQF
0401: ARGVGPISLI GDESDFERRM DDLKLLYRAY VTDALSGGRL EENKLVAMSQ LRNILGLGKR EAEAISVDVT SKSYRKRLAN AVSSGDLEAQ DSKAKYLQKL
0501: CEELHFDAQK AGAIHEEIYR QKLQQCVTDG ELSDDNVAAL LRLRVMLCIP QQTVDTAHAE ICGTIFEKVV RDAISSGVDG YDAETRKSVR KAAHGLRLSR
0601: ETAMSIASKA VRRVFTNYIR RARAAENRTD SAKELKKMIA FNTLVVTEMV ADIKGESSDK APEEDPVQEK EEDDEDEEWG SLESLRKTRP DKELAEKMGK
0701: PGQTEITLKD DLPDRDRIDL YKTYLLYCVT GEVTRIPFGA QITTKRDDSE YLLLNQLGGI LGLSSKEIVN IHVGLAEQAF RQQAEVILAD GQLTKARVEQ
0801: LDELQKQVGL PQPQAEKVIK NITTTKMANA IETAVNQGRL NIKQIRELKE ANVSLDSMIA VSLREKLFKK TVSDIFSSGT GEFDETEVYQ TIPSDLSIDV
0901: EKAKRVVHDL AQSRLSNSLV QAVALLRQRN SKGVVLSLND LLACDKAVPA EPMSWEVSEE LSDLYAIYSK SDPKPAPEKV LRLQYLLGID DSTATALREM
1001: EDGALSSAAE EGNFVF
Arabidopsis Description
TIC110Protein TIC110, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LPR9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.