Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY15593 | Canola | plastid | 98.22 | 98.22 |
| CDY54889 | Canola | plastid | 92.89 | 93.82 |
| CDY10236 | Canola | plastid | 92.89 | 93.63 |
| AT1G06950.1 | Thale cress | plastid | 90.52 | 90.26 |
| CDY06840 | Canola | cytosol, mitochondrion | 6.91 | 73.68 |
| KRH17141 | Soybean | endoplasmic reticulum | 68.61 | 69.78 |
| VIT_06s0004g07730.t01 | Wine grape | plastid | 68.9 | 69.31 |
| KRH30145 | Soybean | cytosol | 8.69 | 69.29 |
| KRH72787 | Soybean | endoplasmic reticulum | 67.82 | 69.05 |
| KRG98182 | Soybean | plastid | 63.18 | 64.65 |
| Solyc09g031780.2.1 | Tomato | plastid | 63.87 | 64.38 |
| GSMUA_Achr11P... | Banana | plastid | 61.4 | 61.1 |
| CDX94311 | Canola | cytosol | 23.1 | 57.07 |
| Os10t0492000-01 | Rice | plastid | 33.37 | 57.0 |
| HORVU5Hr1G048520.1 | Barley | cytosol | 2.67 | 56.25 |
| TraesCS1D01G174900.1 | Wheat | plastid | 54.59 | 53.85 |
| TraesCS1A01G165800.1 | Wheat | golgi | 54.59 | 53.85 |
| TraesCS1B01G182500.1 | Wheat | plastid | 54.39 | 53.6 |
| OQU91582 | Sorghum | plastid | 53.11 | 52.85 |
| Zm00001d032615_P002 | Maize | mitochondrion | 52.81 | 52.81 |
| HORVU1Hr1G043940.3 | Barley | plastid | 54.1 | 50.93 |
| HORVU1Hr1G043900.4 | Barley | plastid | 21.62 | 48.99 |
| TraesCS1D01G175000.1 | Wheat | plastid | 21.42 | 48.65 |
| TraesCS1A01G165700.1 | Wheat | plastid | 21.13 | 47.98 |
| TraesCS1B01G182400.1 | Wheat | plastid | 21.13 | 47.98 |
| Zm00001d004430_P001 | Maize | cytosol | 4.34 | 45.83 |
| Os10t0492300-01 | Rice | plastid | 19.05 | 45.2 |
| Os10t0492101-00 | Rice | plastid | 6.22 | 36.0 |
Protein Annotations
| EnsemblPlants:CDX86508 | EnsemblPlantsGene:GSBRNA2T00145115001 | GO:A0A078DGP6 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0009507 | GO:GO:0009536 | InterPro:TIC110 | PANTHER:PTHR34935 | PFAM:PF16940 |
| ProteinID:CDX86508 | ProteinID:CDX86508.1 | SEG:seg | UniParc:UPI0004EEDD06 | MapMan:23.1.3.2 | : |
Description
BnaC08g01950D
Coordinates
chrLK031846:+:348025..353370
Molecular Weight (calculated)
111773.0 Da
IEP (calculated)
5.849
GRAVY (calculated)
-0.289
Length
1013 amino acids
Sequence
(BLAST)
(BLAST)
0001: MNPSLITATN APISPSPRPP LLCHFLTPSP LRLSQSQSPS RRRYRVSFPR CAATSSEQPL VSTKKSDVHG NKKELTGLQP IVEKMTPPVR LATSAVVLAA
0101: SLASGYGLGL RLAGSRNIAF GAAAAAGAAG GAVVYAMNSA VPEVAAIGLH NYVAEIEDPA SVTKDDIEKI ASRYGVNKGD EAFQAEICDT YCRYVTSVLP
0201: AEGQSLKGDE VDKIIKFKSA LGIDDPDAAS MHMEIGRRIF RQRLETGERE GDAEQRRAFM RLVYVSALVF GDAASFLLPW KRVLKVTDAQ VEIAIRENAK
0301: QLYAERLKLV GRDINVENLV DLRKAQLSIK LSDELAEDLF REHTRTVAIE NISSALSVLK SRTRAVKSMS LVVEELEKVL EFNNLLVSLK SHSEADQFAR
0401: GLGPISLIGG DSDFERRMDD LKLLYRAYVT DALSTGRIEE NKLVAMSQLR NILGLGTREA EAISVDVTSK AYRKRLANAV TSGDLEAQDS KAKYLQKLCE
0501: ELHFDAQKAS AIHEEIYRQK LQQYVTDGEL SDDNVAALLR LRVMLCIPQQ TIEAAHAEIC GSIFEKVVRE AISSGVDGYD AETRKSVRKA AHGLRLSRET
0601: AMSIASKAAR RVFTNYIKRA RAAENRTESA KELKKMIAFN TLVVTEMVAD IKGESSDKEP EEPIQVKEVD TEVEEWGSLE SLKKTRPDKE LAEKMGKPGQ
0701: TEITLKDDLP DRDRIDLYKT YLLYCLTGEV TRIPFGAQIT TKRDDSEYLL LNQLGGILGL TSKEIVNIHV GLAEQAFRQQ AEVILADGQL TKARVEQLDE
0801: LQKQVGLPQP QAEKVIKNIT TTKMANAIET AVNQGRLNIK QIRELKEANV SLDSMIAVSL REKLFKKTVN DIFSSGTGEF DETEVYETIP SDLSIDVEKA
0901: KGVVHDLARS RLSNSLIQSV ALLRQRNRKG VVSSLNDLLA CDKAVPSEPL SWEVAEELSD LYDIYSKSDP KPAPEKVSRL QYLLGIDDST ATALREMEDG
1001: VFSSAAEEGN FVF
0101: SLASGYGLGL RLAGSRNIAF GAAAAAGAAG GAVVYAMNSA VPEVAAIGLH NYVAEIEDPA SVTKDDIEKI ASRYGVNKGD EAFQAEICDT YCRYVTSVLP
0201: AEGQSLKGDE VDKIIKFKSA LGIDDPDAAS MHMEIGRRIF RQRLETGERE GDAEQRRAFM RLVYVSALVF GDAASFLLPW KRVLKVTDAQ VEIAIRENAK
0301: QLYAERLKLV GRDINVENLV DLRKAQLSIK LSDELAEDLF REHTRTVAIE NISSALSVLK SRTRAVKSMS LVVEELEKVL EFNNLLVSLK SHSEADQFAR
0401: GLGPISLIGG DSDFERRMDD LKLLYRAYVT DALSTGRIEE NKLVAMSQLR NILGLGTREA EAISVDVTSK AYRKRLANAV TSGDLEAQDS KAKYLQKLCE
0501: ELHFDAQKAS AIHEEIYRQK LQQYVTDGEL SDDNVAALLR LRVMLCIPQQ TIEAAHAEIC GSIFEKVVRE AISSGVDGYD AETRKSVRKA AHGLRLSRET
0601: AMSIASKAAR RVFTNYIKRA RAAENRTESA KELKKMIAFN TLVVTEMVAD IKGESSDKEP EEPIQVKEVD TEVEEWGSLE SLKKTRPDKE LAEKMGKPGQ
0701: TEITLKDDLP DRDRIDLYKT YLLYCLTGEV TRIPFGAQIT TKRDDSEYLL LNQLGGILGL TSKEIVNIHV GLAEQAFRQQ AEVILADGQL TKARVEQLDE
0801: LQKQVGLPQP QAEKVIKNIT TTKMANAIET AVNQGRLNIK QIRELKEANV SLDSMIAVSL REKLFKKTVN DIFSSGTGEF DETEVYETIP SDLSIDVEKA
0901: KGVVHDLARS RLSNSLIQSV ALLRQRNRKG VVSSLNDLLA CDKAVPSEPL SWEVAEELSD LYDIYSKSDP KPAPEKVSRL QYLLGIDDST ATALREMEDG
1001: VFSSAAEEGN FVF
0001: MNPSLVTAIN APISPSPRSP LLSHFLPTLP HRFSKSECLS RRRYRVSFPR SSAASSDQLS VSTQAKNPGI HGNKKELTGL QPIVEKMTPP VRLATSAVVL
0101: AASLATGYGL GLRLAGSRNI AFGGAAVAGA AGGAVVYALN SAVPEVAAIS LHNYVAEFED PASVTKDDVE KIADRYGVNK GDEAFQAEIC DIYCRYVTSV
0201: LPTEGQSLKG DEVAKIVKFK NALGIDEPDA AAMHMEIGRR IFRQRLETGE REGDAEQRRA FMRLVYVSAL VFGDASSFLL PWKRVLKVTD AQVEIAIREN
0301: AKQLYAERLK LVGRDINVEN LVDLRKSQLS FKLSDELAED LFREHTRKVV VENISSALSI LKSRTRAAKS LASVVEELEK VLEFNNLLVS LKSHSEADQF
0401: ARGVGPISLI GDESDFERRM DDLKLLYRAY VTDALSGGRL EENKLVAMSQ LRNILGLGKR EAEAISVDVT SKSYRKRLAN AVSSGDLEAQ DSKAKYLQKL
0501: CEELHFDAQK AGAIHEEIYR QKLQQCVTDG ELSDDNVAAL LRLRVMLCIP QQTVDTAHAE ICGTIFEKVV RDAISSGVDG YDAETRKSVR KAAHGLRLSR
0601: ETAMSIASKA VRRVFTNYIR RARAAENRTD SAKELKKMIA FNTLVVTEMV ADIKGESSDK APEEDPVQEK EEDDEDEEWG SLESLRKTRP DKELAEKMGK
0701: PGQTEITLKD DLPDRDRIDL YKTYLLYCVT GEVTRIPFGA QITTKRDDSE YLLLNQLGGI LGLSSKEIVN IHVGLAEQAF RQQAEVILAD GQLTKARVEQ
0801: LDELQKQVGL PQPQAEKVIK NITTTKMANA IETAVNQGRL NIKQIRELKE ANVSLDSMIA VSLREKLFKK TVSDIFSSGT GEFDETEVYQ TIPSDLSIDV
0901: EKAKRVVHDL AQSRLSNSLV QAVALLRQRN SKGVVLSLND LLACDKAVPA EPMSWEVSEE LSDLYAIYSK SDPKPAPEKV LRLQYLLGID DSTATALREM
1001: EDGALSSAAE EGNFVF
0101: AASLATGYGL GLRLAGSRNI AFGGAAVAGA AGGAVVYALN SAVPEVAAIS LHNYVAEFED PASVTKDDVE KIADRYGVNK GDEAFQAEIC DIYCRYVTSV
0201: LPTEGQSLKG DEVAKIVKFK NALGIDEPDA AAMHMEIGRR IFRQRLETGE REGDAEQRRA FMRLVYVSAL VFGDASSFLL PWKRVLKVTD AQVEIAIREN
0301: AKQLYAERLK LVGRDINVEN LVDLRKSQLS FKLSDELAED LFREHTRKVV VENISSALSI LKSRTRAAKS LASVVEELEK VLEFNNLLVS LKSHSEADQF
0401: ARGVGPISLI GDESDFERRM DDLKLLYRAY VTDALSGGRL EENKLVAMSQ LRNILGLGKR EAEAISVDVT SKSYRKRLAN AVSSGDLEAQ DSKAKYLQKL
0501: CEELHFDAQK AGAIHEEIYR QKLQQCVTDG ELSDDNVAAL LRLRVMLCIP QQTVDTAHAE ICGTIFEKVV RDAISSGVDG YDAETRKSVR KAAHGLRLSR
0601: ETAMSIASKA VRRVFTNYIR RARAAENRTD SAKELKKMIA FNTLVVTEMV ADIKGESSDK APEEDPVQEK EEDDEDEEWG SLESLRKTRP DKELAEKMGK
0701: PGQTEITLKD DLPDRDRIDL YKTYLLYCVT GEVTRIPFGA QITTKRDDSE YLLLNQLGGI LGLSSKEIVN IHVGLAEQAF RQQAEVILAD GQLTKARVEQ
0801: LDELQKQVGL PQPQAEKVIK NITTTKMANA IETAVNQGRL NIKQIRELKE ANVSLDSMIA VSLREKLFKK TVSDIFSSGT GEFDETEVYQ TIPSDLSIDV
0901: EKAKRVVHDL AQSRLSNSLV QAVALLRQRN SKGVVLSLND LLACDKAVPA EPMSWEVSEE LSDLYAIYSK SDPKPAPEKV LRLQYLLGID DSTATALREM
1001: EDGALSSAAE EGNFVF
Arabidopsis Description
TIC110Protein TIC110, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LPR9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.