Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| GSMUA_Achr11P... | |
| GSMUA_Achr8P16240_001 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_06s0004g07730.t01 | Wine grape | plastid | 66.8 | 67.53 |
| KRH17141 | Soybean | endoplasmic reticulum | 65.52 | 66.97 |
| KRH72787 | Soybean | endoplasmic reticulum | 64.64 | 66.13 |
| KRG98182 | Soybean | plastid | 61.59 | 63.33 |
| HORVU5Hr1G048520.1 | Barley | cytosol | 2.95 | 62.5 |
| CDY54889 | Canola | plastid | 61.0 | 61.91 |
| Bra015538.1-P | Field mustard | plastid | 60.9 | 61.81 |
| CDY10236 | Canola | plastid | 60.71 | 61.49 |
| AT1G06950.1 | Thale cress | plastid | 61.3 | 61.42 |
| CDY15593 | Canola | plastid | 61.1 | 61.4 |
| CDX86508 | Canola | plastid | 61.1 | 61.4 |
| Solyc09g031780.2.1 | Tomato | plastid | 60.51 | 61.29 |
| Bra030666.1-P | Field mustard | plastid | 60.81 | 61.11 |
| Os10t0492000-01 | Rice | plastid | 35.36 | 60.71 |
| KRH30145 | Soybean | cytosol | 7.37 | 59.06 |
| TraesCS1D01G174900.1 | Wheat | plastid | 59.33 | 58.81 |
| TraesCS1B01G182500.1 | Wheat | plastid | 59.33 | 58.75 |
| TraesCS1A01G165800.1 | Wheat | golgi | 59.04 | 58.52 |
| Zm00001d032615_P002 | Maize | mitochondrion | 57.66 | 57.95 |
| OQU91582 | Sorghum | plastid | 57.37 | 57.37 |
| HORVU1Hr1G043940.3 | Barley | plastid | 59.04 | 55.85 |
| TraesCS1D01G175000.1 | Wheat | plastid | 23.48 | 53.59 |
| HORVU1Hr1G043900.4 | Barley | plastid | 23.48 | 53.47 |
| TraesCS1B01G182400.1 | Wheat | plastid | 23.38 | 53.36 |
| TraesCS1A01G165700.1 | Wheat | plastid | 23.18 | 52.91 |
| CDY06840 | Canola | cytosol, mitochondrion | 4.91 | 52.63 |
| Os10t0492300-01 | Rice | plastid | 21.41 | 51.05 |
| CDX94311 | Canola | cytosol | 17.88 | 44.39 |
| Zm00001d004430_P001 | Maize | cytosol | 3.93 | 41.67 |
| Os10t0492101-00 | Rice | plastid | 6.78 | 39.43 |
Protein Annotations
| MapMan:23.1.3.2 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009658 | GO:GO:0009941 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016043 | GO:GO:0045037 | GO:GO:0061927 | EnsemblPlantsGene:GSMUA_Achr11G01840_001 | EnsemblPlants:GSMUA_Achr11P01840_001 |
| EnsemblPlants:GSMUA_Achr11T01840_001 | UniProt:M0RNL4 | PFAM:PF16940 | PANTHER:PTHR34935 | InterPro:TIC110 | UniParc:UPI000295AB41 |
| SEG:seg | : | : | : | : | : |
Description
ATTIC110/TIC110, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr11G01840_001]
Coordinates
chr11:-:1239746..1257756
Molecular Weight (calculated)
112258.0 Da
IEP (calculated)
5.875
GRAVY (calculated)
-0.219
Length
1018 amino acids
Sequence
(BLAST)
(BLAST)
0001: METSRLIPTP SFPSHRLLFS PSAPSSSPFR LLPRLPPRHF RRHGRCRLSL PRCSVSADAA AASAPEASPA VDPSVFGGPK ELSGPQALVC ALPPPARMAS
0101: SAVLAAAAMA AGFGLGLRVG GSKVAGIGGA AVLGVAGGAA VYALNSKVPE VAAISLHNLV AGYDDPTELR KDEVAAIVEK YGVSKQDDAF KAELCDLYSR
0201: FVSSVLPPGS ENLKGYEVEM IIRFKEALGI DDPDAASVHV EIGRHIYRQR LETGDREADI EQRRAFQKLI YVSTLVFGEA SKFLLPWKRL FNVTDSQIEI
0301: AIRDNAQKLY ASKLKLIGRD IEVKQLIELR ESQLLYRLSD QIAGEMFREH TRELVEENIS SALSILKSRG KTSMGTLQVI EELEKVLAFN NLLTSLSKHS
0401: DSGQFAQGVG PVSLIGGEFD GDRKIEDLKL LYRTYAEESF SSGCLQEEKL TALSQLRNIF GLGKREAENI MLDVTSRVYR RRLSRAFSGG DLDAAPSKAA
0501: FLQNLCEELH FDPNIASKIH EEIYRQKLRQ FVEDGELSEE EVASLQRYRV LLCIHHETID AAHADICGRL FEKVVKDAIA SGVEGYDAEV RNSVRKASKG
0601: LRLTTDAAMA IANKAVRRVF MTYIQRSKGA GNRTEAAREL KKMIAFNALV VTELISDIKG EPAAPAEPID VDSKQIDEED EWESLQTLRK THPNKELEAK
0701: LTKPAQTEIT LKDDLPERDR AEIYRTYLLF CITGEVTTVP FGAQIATKKD NSEFLLLNQL GRILGMTGKE IVEVHRNFAE QAFMKQAEVI LADGQLTKAR
0801: IEQLNEVQKQ VGLPAEYAQK VIKNITTTKM AAAIETAVSQ GRIGIQQVRE LKEANIDLDS MISERLRESL FRKTVEEIFS SGTGVFNEAE VYEKIPSDLS
0901: IDADKAKGVV KELAKTRLSN SLVQAVALLR QRNRDGVISS LNDMLACDMA VPAEPLSWSS PEELADLYCI YLKSIPKPEK LTRLQHLLGI SDSTAAILRD
1001: TAERGALPVG DEEEEFVF
0101: SAVLAAAAMA AGFGLGLRVG GSKVAGIGGA AVLGVAGGAA VYALNSKVPE VAAISLHNLV AGYDDPTELR KDEVAAIVEK YGVSKQDDAF KAELCDLYSR
0201: FVSSVLPPGS ENLKGYEVEM IIRFKEALGI DDPDAASVHV EIGRHIYRQR LETGDREADI EQRRAFQKLI YVSTLVFGEA SKFLLPWKRL FNVTDSQIEI
0301: AIRDNAQKLY ASKLKLIGRD IEVKQLIELR ESQLLYRLSD QIAGEMFREH TRELVEENIS SALSILKSRG KTSMGTLQVI EELEKVLAFN NLLTSLSKHS
0401: DSGQFAQGVG PVSLIGGEFD GDRKIEDLKL LYRTYAEESF SSGCLQEEKL TALSQLRNIF GLGKREAENI MLDVTSRVYR RRLSRAFSGG DLDAAPSKAA
0501: FLQNLCEELH FDPNIASKIH EEIYRQKLRQ FVEDGELSEE EVASLQRYRV LLCIHHETID AAHADICGRL FEKVVKDAIA SGVEGYDAEV RNSVRKASKG
0601: LRLTTDAAMA IANKAVRRVF MTYIQRSKGA GNRTEAAREL KKMIAFNALV VTELISDIKG EPAAPAEPID VDSKQIDEED EWESLQTLRK THPNKELEAK
0701: LTKPAQTEIT LKDDLPERDR AEIYRTYLLF CITGEVTTVP FGAQIATKKD NSEFLLLNQL GRILGMTGKE IVEVHRNFAE QAFMKQAEVI LADGQLTKAR
0801: IEQLNEVQKQ VGLPAEYAQK VIKNITTTKM AAAIETAVSQ GRIGIQQVRE LKEANIDLDS MISERLRESL FRKTVEEIFS SGTGVFNEAE VYEKIPSDLS
0901: IDADKAKGVV KELAKTRLSN SLVQAVALLR QRNRDGVISS LNDMLACDMA VPAEPLSWSS PEELADLYCI YLKSIPKPEK LTRLQHLLGI SDSTAAILRD
1001: TAERGALPVG DEEEEFVF
0001: MNPSLVTAIN APISPSPRSP LLSHFLPTLP HRFSKSECLS RRRYRVSFPR SSAASSDQLS VSTQAKNPGI HGNKKELTGL QPIVEKMTPP VRLATSAVVL
0101: AASLATGYGL GLRLAGSRNI AFGGAAVAGA AGGAVVYALN SAVPEVAAIS LHNYVAEFED PASVTKDDVE KIADRYGVNK GDEAFQAEIC DIYCRYVTSV
0201: LPTEGQSLKG DEVAKIVKFK NALGIDEPDA AAMHMEIGRR IFRQRLETGE REGDAEQRRA FMRLVYVSAL VFGDASSFLL PWKRVLKVTD AQVEIAIREN
0301: AKQLYAERLK LVGRDINVEN LVDLRKSQLS FKLSDELAED LFREHTRKVV VENISSALSI LKSRTRAAKS LASVVEELEK VLEFNNLLVS LKSHSEADQF
0401: ARGVGPISLI GDESDFERRM DDLKLLYRAY VTDALSGGRL EENKLVAMSQ LRNILGLGKR EAEAISVDVT SKSYRKRLAN AVSSGDLEAQ DSKAKYLQKL
0501: CEELHFDAQK AGAIHEEIYR QKLQQCVTDG ELSDDNVAAL LRLRVMLCIP QQTVDTAHAE ICGTIFEKVV RDAISSGVDG YDAETRKSVR KAAHGLRLSR
0601: ETAMSIASKA VRRVFTNYIR RARAAENRTD SAKELKKMIA FNTLVVTEMV ADIKGESSDK APEEDPVQEK EEDDEDEEWG SLESLRKTRP DKELAEKMGK
0701: PGQTEITLKD DLPDRDRIDL YKTYLLYCVT GEVTRIPFGA QITTKRDDSE YLLLNQLGGI LGLSSKEIVN IHVGLAEQAF RQQAEVILAD GQLTKARVEQ
0801: LDELQKQVGL PQPQAEKVIK NITTTKMANA IETAVNQGRL NIKQIRELKE ANVSLDSMIA VSLREKLFKK TVSDIFSSGT GEFDETEVYQ TIPSDLSIDV
0901: EKAKRVVHDL AQSRLSNSLV QAVALLRQRN SKGVVLSLND LLACDKAVPA EPMSWEVSEE LSDLYAIYSK SDPKPAPEKV LRLQYLLGID DSTATALREM
1001: EDGALSSAAE EGNFVF
0101: AASLATGYGL GLRLAGSRNI AFGGAAVAGA AGGAVVYALN SAVPEVAAIS LHNYVAEFED PASVTKDDVE KIADRYGVNK GDEAFQAEIC DIYCRYVTSV
0201: LPTEGQSLKG DEVAKIVKFK NALGIDEPDA AAMHMEIGRR IFRQRLETGE REGDAEQRRA FMRLVYVSAL VFGDASSFLL PWKRVLKVTD AQVEIAIREN
0301: AKQLYAERLK LVGRDINVEN LVDLRKSQLS FKLSDELAED LFREHTRKVV VENISSALSI LKSRTRAAKS LASVVEELEK VLEFNNLLVS LKSHSEADQF
0401: ARGVGPISLI GDESDFERRM DDLKLLYRAY VTDALSGGRL EENKLVAMSQ LRNILGLGKR EAEAISVDVT SKSYRKRLAN AVSSGDLEAQ DSKAKYLQKL
0501: CEELHFDAQK AGAIHEEIYR QKLQQCVTDG ELSDDNVAAL LRLRVMLCIP QQTVDTAHAE ICGTIFEKVV RDAISSGVDG YDAETRKSVR KAAHGLRLSR
0601: ETAMSIASKA VRRVFTNYIR RARAAENRTD SAKELKKMIA FNTLVVTEMV ADIKGESSDK APEEDPVQEK EEDDEDEEWG SLESLRKTRP DKELAEKMGK
0701: PGQTEITLKD DLPDRDRIDL YKTYLLYCVT GEVTRIPFGA QITTKRDDSE YLLLNQLGGI LGLSSKEIVN IHVGLAEQAF RQQAEVILAD GQLTKARVEQ
0801: LDELQKQVGL PQPQAEKVIK NITTTKMANA IETAVNQGRL NIKQIRELKE ANVSLDSMIA VSLREKLFKK TVSDIFSSGT GEFDETEVYQ TIPSDLSIDV
0901: EKAKRVVHDL AQSRLSNSLV QAVALLRQRN SKGVVLSLND LLACDKAVPA EPMSWEVSEE LSDLYAIYSK SDPKPAPEKV LRLQYLLGID DSTATALREM
1001: EDGALSSAAE EGNFVF
Arabidopsis Description
TIC110Protein TIC110, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LPR9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.