Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra015538.1-P | Field mustard | plastid | 99.7 | 99.7 |
| CDY10236 | Canola | plastid | 97.41 | 97.21 |
| CDY15593 | Canola | plastid | 94.32 | 93.39 |
| CDX86508 | Canola | plastid | 93.82 | 92.89 |
| AT1G06950.1 | Thale cress | plastid | 91.03 | 89.86 |
| CDY06840 | Canola | cytosol, mitochondrion | 6.98 | 73.68 |
| KRH17141 | Soybean | endoplasmic reticulum | 68.89 | 69.38 |
| KRH72787 | Soybean | endoplasmic reticulum | 68.2 | 68.74 |
| VIT_06s0004g07730.t01 | Wine grape | plastid | 68.39 | 68.12 |
| KRH30145 | Soybean | cytosol | 8.57 | 67.72 |
| Solyc09g031780.2.1 | Tomato | plastid | 64.71 | 64.58 |
| KRG98182 | Soybean | plastid | 63.21 | 64.04 |
| GSMUA_Achr11P... | Banana | plastid | 61.91 | 61.0 |
| CDX94311 | Canola | cytosol | 23.63 | 57.8 |
| Os10t0492000-01 | Rice | plastid | 33.6 | 56.83 |
| HORVU5Hr1G048520.1 | Barley | cytosol | 2.59 | 54.17 |
| TraesCS1D01G174900.1 | Wheat | plastid | 54.34 | 53.07 |
| TraesCS1A01G165800.1 | Wheat | golgi | 54.14 | 52.87 |
| TraesCS1B01G182500.1 | Wheat | plastid | 53.94 | 52.63 |
| Zm00001d032615_P002 | Maize | mitochondrion | 53.14 | 52.62 |
| OQU91582 | Sorghum | plastid | 53.34 | 52.55 |
| HORVU1Hr1G043940.3 | Barley | plastid | 53.84 | 50.19 |
| HORVU1Hr1G043900.4 | Barley | plastid | 20.94 | 46.98 |
| TraesCS1D01G175000.1 | Wheat | plastid | 20.74 | 46.64 |
| TraesCS1B01G182400.1 | Wheat | plastid | 20.54 | 46.19 |
| TraesCS1A01G165700.1 | Wheat | plastid | 20.54 | 46.19 |
| Zm00001d004430_P001 | Maize | cytosol | 4.39 | 45.83 |
| Os10t0492300-01 | Rice | plastid | 18.54 | 43.56 |
| Os10t0492101-00 | Rice | plastid | 5.98 | 34.29 |
Protein Annotations
| EnsemblPlants:CDY54889 | EnsemblPlantsGene:GSBRNA2T00014794001 | GO:A0A078J003 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0009507 | GO:GO:0009536 | InterPro:TIC110 | PANTHER:PTHR34935 | PFAM:PF16940 |
| ProteinID:CDY54889 | ProteinID:CDY54889.1 | SEG:seg | UniParc:UPI0004EEA868 | UniProt:A0A078J003 | MapMan:23.1.3.2 |
Description
BnaA10g28000DBnaA10g28000D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J003]
Coordinates
chrLK033358:-:47918..52853
Molecular Weight (calculated)
110697.0 Da
IEP (calculated)
5.572
GRAVY (calculated)
-0.283
Length
1003 amino acids
Sequence
(BLAST)
(BLAST)
0001: MNPTAINAPI SPSPRSPLLC HFLTPLPLRL SNSQSQTRRR YRASFPRCAA TPSEQPLVMS NKKELTGLQP IVEKMTPPVR LATSAVVLAA SLATGYGLGL
0101: RLMGSKNIAL GGAAVAGAAG GALVYALNSA VPEVAAIGLH NYVAEFEDPA SVTKEDIEKI ASRYGVNKGD EAFQAEICDI YCRYVTSVLP AEGQSLKGDE
0201: VEKIVKFKSA LGIDDPDAAS MHMEIGRRIF RQRLETGERE GDAEQRRAFM RLVYVSALVF GDAASFLLPW KRVLKVTDAQ VEIAIRENAK QLYAERLKLV
0301: GRDINVENLV DLRKAQLSFK LSDELAEELF REHTRTVAIE NITSALGVLK NRTRAVKSMS LVVEELEKVL EFNNLLVSLK SHSEAANFAR GVGPISLIGG
0401: ESDFERRMDD LKLLYRAYVT DALSSGRIEE NKLVAMSQLR NILGLGTREA EAISVDVTSK AYRKRLANAF SSGDLEAQDS KAKYLQKLCE ELHFDAQKAS
0501: AIHEDIYRQK LQQCVTDGEL SDDNVAALLR LRVMLCIPQQ TIEAAHAEIC GSIFEKVVRE AISSGVDGYD AETRKSVRKA AHGLRLSRET AMSIASKAVR
0601: RVFTNYIRRA RSAENRTESA KELKKMIAFN KLVVTEMVAD IKGESSDKEP EEPVQEKKEN GEDEEWGSLE SLRKTRPDKE LAEKMGKPGQ TEITLKDDLP
0701: DRDRIDLYKT YLLYCLTGEV TRIPFGAQIT TKRDDSEYLL LNQLGGILGL TSKEIVNIHV GLAEQAFRQQ AEVILADGQL TKARVEQLDE LQKEVGLPQP
0801: QAEKVIKNIT TTKMANAIET AVNQGRLNIK QIRELKEANV SLDSMIAVSL REKLFKKTVN DIFSSGTGEF DETEVYETIP SDLSIDVEKA KGVVHDLAQS
0901: RLSNSLIQAV ALLRQRNAKG VVSSLNDLLA CDKAVPAEPL SWEVSEELSD LYSIYSKSDP KPAPEKVSRL QYLLGIDDST ATALSEMEDG AFSSAAEEGN
1001: FVF
0101: RLMGSKNIAL GGAAVAGAAG GALVYALNSA VPEVAAIGLH NYVAEFEDPA SVTKEDIEKI ASRYGVNKGD EAFQAEICDI YCRYVTSVLP AEGQSLKGDE
0201: VEKIVKFKSA LGIDDPDAAS MHMEIGRRIF RQRLETGERE GDAEQRRAFM RLVYVSALVF GDAASFLLPW KRVLKVTDAQ VEIAIRENAK QLYAERLKLV
0301: GRDINVENLV DLRKAQLSFK LSDELAEELF REHTRTVAIE NITSALGVLK NRTRAVKSMS LVVEELEKVL EFNNLLVSLK SHSEAANFAR GVGPISLIGG
0401: ESDFERRMDD LKLLYRAYVT DALSSGRIEE NKLVAMSQLR NILGLGTREA EAISVDVTSK AYRKRLANAF SSGDLEAQDS KAKYLQKLCE ELHFDAQKAS
0501: AIHEDIYRQK LQQCVTDGEL SDDNVAALLR LRVMLCIPQQ TIEAAHAEIC GSIFEKVVRE AISSGVDGYD AETRKSVRKA AHGLRLSRET AMSIASKAVR
0601: RVFTNYIRRA RSAENRTESA KELKKMIAFN KLVVTEMVAD IKGESSDKEP EEPVQEKKEN GEDEEWGSLE SLRKTRPDKE LAEKMGKPGQ TEITLKDDLP
0701: DRDRIDLYKT YLLYCLTGEV TRIPFGAQIT TKRDDSEYLL LNQLGGILGL TSKEIVNIHV GLAEQAFRQQ AEVILADGQL TKARVEQLDE LQKEVGLPQP
0801: QAEKVIKNIT TTKMANAIET AVNQGRLNIK QIRELKEANV SLDSMIAVSL REKLFKKTVN DIFSSGTGEF DETEVYETIP SDLSIDVEKA KGVVHDLAQS
0901: RLSNSLIQAV ALLRQRNAKG VVSSLNDLLA CDKAVPAEPL SWEVSEELSD LYSIYSKSDP KPAPEKVSRL QYLLGIDDST ATALSEMEDG AFSSAAEEGN
1001: FVF
0001: MNPSLVTAIN APISPSPRSP LLSHFLPTLP HRFSKSECLS RRRYRVSFPR SSAASSDQLS VSTQAKNPGI HGNKKELTGL QPIVEKMTPP VRLATSAVVL
0101: AASLATGYGL GLRLAGSRNI AFGGAAVAGA AGGAVVYALN SAVPEVAAIS LHNYVAEFED PASVTKDDVE KIADRYGVNK GDEAFQAEIC DIYCRYVTSV
0201: LPTEGQSLKG DEVAKIVKFK NALGIDEPDA AAMHMEIGRR IFRQRLETGE REGDAEQRRA FMRLVYVSAL VFGDASSFLL PWKRVLKVTD AQVEIAIREN
0301: AKQLYAERLK LVGRDINVEN LVDLRKSQLS FKLSDELAED LFREHTRKVV VENISSALSI LKSRTRAAKS LASVVEELEK VLEFNNLLVS LKSHSEADQF
0401: ARGVGPISLI GDESDFERRM DDLKLLYRAY VTDALSGGRL EENKLVAMSQ LRNILGLGKR EAEAISVDVT SKSYRKRLAN AVSSGDLEAQ DSKAKYLQKL
0501: CEELHFDAQK AGAIHEEIYR QKLQQCVTDG ELSDDNVAAL LRLRVMLCIP QQTVDTAHAE ICGTIFEKVV RDAISSGVDG YDAETRKSVR KAAHGLRLSR
0601: ETAMSIASKA VRRVFTNYIR RARAAENRTD SAKELKKMIA FNTLVVTEMV ADIKGESSDK APEEDPVQEK EEDDEDEEWG SLESLRKTRP DKELAEKMGK
0701: PGQTEITLKD DLPDRDRIDL YKTYLLYCVT GEVTRIPFGA QITTKRDDSE YLLLNQLGGI LGLSSKEIVN IHVGLAEQAF RQQAEVILAD GQLTKARVEQ
0801: LDELQKQVGL PQPQAEKVIK NITTTKMANA IETAVNQGRL NIKQIRELKE ANVSLDSMIA VSLREKLFKK TVSDIFSSGT GEFDETEVYQ TIPSDLSIDV
0901: EKAKRVVHDL AQSRLSNSLV QAVALLRQRN SKGVVLSLND LLACDKAVPA EPMSWEVSEE LSDLYAIYSK SDPKPAPEKV LRLQYLLGID DSTATALREM
1001: EDGALSSAAE EGNFVF
0101: AASLATGYGL GLRLAGSRNI AFGGAAVAGA AGGAVVYALN SAVPEVAAIS LHNYVAEFED PASVTKDDVE KIADRYGVNK GDEAFQAEIC DIYCRYVTSV
0201: LPTEGQSLKG DEVAKIVKFK NALGIDEPDA AAMHMEIGRR IFRQRLETGE REGDAEQRRA FMRLVYVSAL VFGDASSFLL PWKRVLKVTD AQVEIAIREN
0301: AKQLYAERLK LVGRDINVEN LVDLRKSQLS FKLSDELAED LFREHTRKVV VENISSALSI LKSRTRAAKS LASVVEELEK VLEFNNLLVS LKSHSEADQF
0401: ARGVGPISLI GDESDFERRM DDLKLLYRAY VTDALSGGRL EENKLVAMSQ LRNILGLGKR EAEAISVDVT SKSYRKRLAN AVSSGDLEAQ DSKAKYLQKL
0501: CEELHFDAQK AGAIHEEIYR QKLQQCVTDG ELSDDNVAAL LRLRVMLCIP QQTVDTAHAE ICGTIFEKVV RDAISSGVDG YDAETRKSVR KAAHGLRLSR
0601: ETAMSIASKA VRRVFTNYIR RARAAENRTD SAKELKKMIA FNTLVVTEMV ADIKGESSDK APEEDPVQEK EEDDEDEEWG SLESLRKTRP DKELAEKMGK
0701: PGQTEITLKD DLPDRDRIDL YKTYLLYCVT GEVTRIPFGA QITTKRDDSE YLLLNQLGGI LGLSSKEIVN IHVGLAEQAF RQQAEVILAD GQLTKARVEQ
0801: LDELQKQVGL PQPQAEKVIK NITTTKMANA IETAVNQGRL NIKQIRELKE ANVSLDSMIA VSLREKLFKK TVSDIFSSGT GEFDETEVYQ TIPSDLSIDV
0901: EKAKRVVHDL AQSRLSNSLV QAVALLRQRN SKGVVLSLND LLACDKAVPA EPMSWEVSEE LSDLYAIYSK SDPKPAPEKV LRLQYLLGID DSTATALREM
1001: EDGALSSAAE EGNFVF
Arabidopsis Description
TIC110Protein TIC110, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LPR9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.