Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- cytosol 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| EES12206 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G06950.1 | EES12206 | AT5G16620.1 | 15829604 |
| AT1G06950.1 | EES12206 | AT5G16620.1 | 17535810 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d032615_P002 | Maize | mitochondrion | 89.49 | 89.93 |
| Os10t0492000-01 | Rice | plastid | 48.23 | 82.8 |
| TraesCS1D01G174900.1 | Wheat | plastid | 78.59 | 77.9 |
| TraesCS1B01G182500.1 | Wheat | plastid | 78.29 | 77.53 |
| TraesCS1A01G165800.1 | Wheat | golgi | 78.0 | 77.31 |
| Zm00001d004430_P001 | Maize | cytosol | 7.27 | 77.08 |
| HORVU5Hr1G048520.1 | Barley | cytosol | 3.54 | 75.0 |
| Os10t0492101-00 | Rice | plastid | 12.57 | 73.14 |
| HORVU1Hr1G043940.3 | Barley | plastid | 77.21 | 73.05 |
| TraesCS1D01G175000.1 | Wheat | plastid | 30.26 | 69.06 |
| HORVU1Hr1G043900.4 | Barley | plastid | 30.26 | 68.9 |
| TraesCS1B01G182400.1 | Wheat | plastid | 30.16 | 68.83 |
| TraesCS1A01G165700.1 | Wheat | plastid | 30.06 | 68.61 |
| GSMUA_Achr11P... | Banana | plastid | 57.37 | 57.37 |
| VIT_06s0004g07730.t01 | Wine grape | plastid | 54.81 | 55.41 |
| KRH17141 | Soybean | endoplasmic reticulum | 53.83 | 55.02 |
| KRH72787 | Soybean | endoplasmic reticulum | 53.63 | 54.87 |
| CDY54889 | Canola | plastid | 52.55 | 53.34 |
| Bra015538.1-P | Field mustard | plastid | 52.55 | 53.34 |
| AT1G06950.1 | Thale cress | plastid | 53.05 | 53.15 |
| CDY10236 | Canola | plastid | 52.46 | 53.13 |
| CDX86508 | Canola | plastid | 52.85 | 53.11 |
| CDY15593 | Canola | plastid | 52.65 | 52.91 |
| Solyc09g031780.2.1 | Tomato | plastid | 52.06 | 52.74 |
| Bra030666.1-P | Field mustard | plastid | 52.46 | 52.71 |
| KRG98182 | Soybean | plastid | 49.71 | 51.11 |
| KRH30145 | Soybean | cytosol | 5.7 | 45.67 |
| CDY06840 | Canola | cytosol, mitochondrion | 3.93 | 42.11 |
| CDX94311 | Canola | cytosol | 14.83 | 36.83 |
Protein Annotations
| MapMan:23.1.3.2 | UniProt:A0A1Z5S6M4 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009658 | GO:GO:0009941 |
| GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0045037 | GO:GO:0061927 | EnsemblPlants:OQU91582 |
| ProteinID:OQU91582 | ProteinID:OQU91582.1 | PFAM:PF16940 | PANTHER:PTHR34935 | EnsemblPlantsGene:SORBI_3001G208700 | InterPro:TIC110 |
| UniParc:UPI000B426D5E | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:+:19108818..19117312
Molecular Weight (calculated)
111656.0 Da
IEP (calculated)
5.723
GRAVY (calculated)
-0.223
Length
1018 amino acids
Sequence
(BLAST)
(BLAST)
0001: MELALASAKP SPRSAAGASP PPLLFSPLKP FPLLRFPPRP RRPAAARLRL WLRLRLRAAA AGGEASSPGG EAVFGARREL TGIQPLVEAL PPVARTAAEL
0101: AVAAAAVAAG YGIGLRAGGG SRAVAVAGAA VLGAASVAGA AAVNSVVPEV AAVGLHNYVA GHDDPTNLES GEVEAIANKY GVSTQDEAFK AELCDLYARY
0201: VYSVLPPGDE DLKGTEVQAI IKFKRALGLD DVDAANMHME IGRRIYRERL ETSDRDADME QRRAFQKLIY VSNLVFGDAS AFLLPWKRLF GVTDSQIDIA
0301: MRENAKSLYS VQLKSIGRGL DTGTLIDVRR AQLAYKLSDE IAAEMFREHV KKLVQDNISS ALDILKSRIP DSLTQAVEEV NIVIKFNSLL TTLSKHPQAD
0401: HFARGLGPIS LAGEHDHDRR ADDLKILYKA YATEVLSDGI VDDEKLSPLN ELRNIFGLGK RETEGILSDV KAHIYRKTLA KSFNTELASV PSKAAFLQIL
0501: CEKLQFDPEL ASKMHEEIYR QKLQQFVADG ELSKEEVEAL MAFQVRLCIP QETVDAVHTE ICGQLFEKVV KEAIASVDGY NADRREAVRK AAQSLNLKTE
0601: AAMAIFSKAV RKLFLSYIQR AKEAGNRIET AKELKKLISF NIVVVSELLA DIKGEISPVA ETEASSAASE SEGEDDEHEW ESLETLRKTR PEKELKEKLR
0701: KSSQKEITLK DDIPLRDRAE LYETYLMFCI TGETTNVSFG TAISTKKDDS EFLMLKQLGD ILGLTRKEAQ DVHIKFAEKA FVQQAEVILA DGKLTEAKAD
0801: QLAKIQKQVG LPTEHAQKII KGITTTKLSS AIEASVARGQ IGIQQVRGLR EANFQLDSLI GEPQRESIYK KTVEEIFSSG KGDFDEEEMY EKIPADLIIS
0901: SEKAKSIVQD IAKVRLENSL VQAIALLRQK KRDDVVSSLN DMLACDAAVP ASKPLSWPTP GELDDLYAIY LKSIPRPEKL SRLQYLLGIS NEKANKIRDA
1001: ASEGSLPIAA EEKEELAF
0101: AVAAAAVAAG YGIGLRAGGG SRAVAVAGAA VLGAASVAGA AAVNSVVPEV AAVGLHNYVA GHDDPTNLES GEVEAIANKY GVSTQDEAFK AELCDLYARY
0201: VYSVLPPGDE DLKGTEVQAI IKFKRALGLD DVDAANMHME IGRRIYRERL ETSDRDADME QRRAFQKLIY VSNLVFGDAS AFLLPWKRLF GVTDSQIDIA
0301: MRENAKSLYS VQLKSIGRGL DTGTLIDVRR AQLAYKLSDE IAAEMFREHV KKLVQDNISS ALDILKSRIP DSLTQAVEEV NIVIKFNSLL TTLSKHPQAD
0401: HFARGLGPIS LAGEHDHDRR ADDLKILYKA YATEVLSDGI VDDEKLSPLN ELRNIFGLGK RETEGILSDV KAHIYRKTLA KSFNTELASV PSKAAFLQIL
0501: CEKLQFDPEL ASKMHEEIYR QKLQQFVADG ELSKEEVEAL MAFQVRLCIP QETVDAVHTE ICGQLFEKVV KEAIASVDGY NADRREAVRK AAQSLNLKTE
0601: AAMAIFSKAV RKLFLSYIQR AKEAGNRIET AKELKKLISF NIVVVSELLA DIKGEISPVA ETEASSAASE SEGEDDEHEW ESLETLRKTR PEKELKEKLR
0701: KSSQKEITLK DDIPLRDRAE LYETYLMFCI TGETTNVSFG TAISTKKDDS EFLMLKQLGD ILGLTRKEAQ DVHIKFAEKA FVQQAEVILA DGKLTEAKAD
0801: QLAKIQKQVG LPTEHAQKII KGITTTKLSS AIEASVARGQ IGIQQVRGLR EANFQLDSLI GEPQRESIYK KTVEEIFSSG KGDFDEEEMY EKIPADLIIS
0901: SEKAKSIVQD IAKVRLENSL VQAIALLRQK KRDDVVSSLN DMLACDAAVP ASKPLSWPTP GELDDLYAIY LKSIPRPEKL SRLQYLLGIS NEKANKIRDA
1001: ASEGSLPIAA EEKEELAF
0001: MNPSLVTAIN APISPSPRSP LLSHFLPTLP HRFSKSECLS RRRYRVSFPR SSAASSDQLS VSTQAKNPGI HGNKKELTGL QPIVEKMTPP VRLATSAVVL
0101: AASLATGYGL GLRLAGSRNI AFGGAAVAGA AGGAVVYALN SAVPEVAAIS LHNYVAEFED PASVTKDDVE KIADRYGVNK GDEAFQAEIC DIYCRYVTSV
0201: LPTEGQSLKG DEVAKIVKFK NALGIDEPDA AAMHMEIGRR IFRQRLETGE REGDAEQRRA FMRLVYVSAL VFGDASSFLL PWKRVLKVTD AQVEIAIREN
0301: AKQLYAERLK LVGRDINVEN LVDLRKSQLS FKLSDELAED LFREHTRKVV VENISSALSI LKSRTRAAKS LASVVEELEK VLEFNNLLVS LKSHSEADQF
0401: ARGVGPISLI GDESDFERRM DDLKLLYRAY VTDALSGGRL EENKLVAMSQ LRNILGLGKR EAEAISVDVT SKSYRKRLAN AVSSGDLEAQ DSKAKYLQKL
0501: CEELHFDAQK AGAIHEEIYR QKLQQCVTDG ELSDDNVAAL LRLRVMLCIP QQTVDTAHAE ICGTIFEKVV RDAISSGVDG YDAETRKSVR KAAHGLRLSR
0601: ETAMSIASKA VRRVFTNYIR RARAAENRTD SAKELKKMIA FNTLVVTEMV ADIKGESSDK APEEDPVQEK EEDDEDEEWG SLESLRKTRP DKELAEKMGK
0701: PGQTEITLKD DLPDRDRIDL YKTYLLYCVT GEVTRIPFGA QITTKRDDSE YLLLNQLGGI LGLSSKEIVN IHVGLAEQAF RQQAEVILAD GQLTKARVEQ
0801: LDELQKQVGL PQPQAEKVIK NITTTKMANA IETAVNQGRL NIKQIRELKE ANVSLDSMIA VSLREKLFKK TVSDIFSSGT GEFDETEVYQ TIPSDLSIDV
0901: EKAKRVVHDL AQSRLSNSLV QAVALLRQRN SKGVVLSLND LLACDKAVPA EPMSWEVSEE LSDLYAIYSK SDPKPAPEKV LRLQYLLGID DSTATALREM
1001: EDGALSSAAE EGNFVF
0101: AASLATGYGL GLRLAGSRNI AFGGAAVAGA AGGAVVYALN SAVPEVAAIS LHNYVAEFED PASVTKDDVE KIADRYGVNK GDEAFQAEIC DIYCRYVTSV
0201: LPTEGQSLKG DEVAKIVKFK NALGIDEPDA AAMHMEIGRR IFRQRLETGE REGDAEQRRA FMRLVYVSAL VFGDASSFLL PWKRVLKVTD AQVEIAIREN
0301: AKQLYAERLK LVGRDINVEN LVDLRKSQLS FKLSDELAED LFREHTRKVV VENISSALSI LKSRTRAAKS LASVVEELEK VLEFNNLLVS LKSHSEADQF
0401: ARGVGPISLI GDESDFERRM DDLKLLYRAY VTDALSGGRL EENKLVAMSQ LRNILGLGKR EAEAISVDVT SKSYRKRLAN AVSSGDLEAQ DSKAKYLQKL
0501: CEELHFDAQK AGAIHEEIYR QKLQQCVTDG ELSDDNVAAL LRLRVMLCIP QQTVDTAHAE ICGTIFEKVV RDAISSGVDG YDAETRKSVR KAAHGLRLSR
0601: ETAMSIASKA VRRVFTNYIR RARAAENRTD SAKELKKMIA FNTLVVTEMV ADIKGESSDK APEEDPVQEK EEDDEDEEWG SLESLRKTRP DKELAEKMGK
0701: PGQTEITLKD DLPDRDRIDL YKTYLLYCVT GEVTRIPFGA QITTKRDDSE YLLLNQLGGI LGLSSKEIVN IHVGLAEQAF RQQAEVILAD GQLTKARVEQ
0801: LDELQKQVGL PQPQAEKVIK NITTTKMANA IETAVNQGRL NIKQIRELKE ANVSLDSMIA VSLREKLFKK TVSDIFSSGT GEFDETEVYQ TIPSDLSIDV
0901: EKAKRVVHDL AQSRLSNSLV QAVALLRQRN SKGVVLSLND LLACDKAVPA EPMSWEVSEE LSDLYAIYSK SDPKPAPEKV LRLQYLLGID DSTATALREM
1001: EDGALSSAAE EGNFVF
Arabidopsis Description
TIC110Protein TIC110, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8LPR9]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.