Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY52130 | Canola | cytosol, plastid | 97.76 | 97.76 |
| CDX98810 | Canola | cytosol | 93.29 | 93.29 |
| AT5G05000.3 | Thale cress | cytosol | 87.86 | 87.86 |
| PGSC0003DMT400013477 | Potato | cytosol | 68.05 | 70.76 |
| VIT_02s0109g00360.t01 | Wine grape | cytosol | 69.01 | 69.68 |
| Solyc03g095220.2.1 | Tomato | plastid | 57.51 | 69.5 |
| PGSC0003DMT400030414 | Potato | cytosol, plastid | 65.18 | 67.77 |
| VIT_16s0039g02670.t01 | Wine grape | cytosol | 66.13 | 67.21 |
| Solyc05g052160.2.1 | Tomato | plastid | 63.9 | 66.45 |
| GSMUA_Achr1P22210_001 | Banana | cytosol | 29.39 | 66.19 |
| GSMUA_AchrUn_... | Banana | cytosol | 65.81 | 66.03 |
| KRG94982 | Soybean | cytosol | 65.5 | 65.71 |
| KRH64901 | Soybean | cytosol | 64.86 | 64.86 |
| CDY55323 | Canola | cytosol | 59.11 | 62.29 |
| CDY32453 | Canola | cytosol | 59.11 | 62.29 |
| CDX89987 | Canola | cytosol | 59.11 | 62.08 |
| CDY15228 | Canola | cytosol | 58.47 | 61.41 |
| KXG39799 | Sorghum | cytosol | 61.34 | 58.9 |
| TraesCS4A01G072800.1 | Wheat | golgi, plastid | 60.38 | 57.98 |
| TraesCS4B01G228900.1 | Wheat | cytosol | 60.38 | 57.98 |
| TraesCS4D01G230000.1 | Wheat | cytosol | 60.38 | 57.98 |
| Os03t0240500-01 | Rice | plastid | 59.74 | 57.19 |
| Zm00001d028373_P002 | Maize | cytosol | 60.06 | 56.29 |
| Zm00001d047965_P002 | Maize | cytosol | 60.06 | 53.11 |
| HORVU4Hr1G064110.2 | Barley | cytosol | 59.74 | 52.53 |
| CDX70178 | Canola | cytosol | 92.01 | 37.94 |
| CDX97269 | Canola | cytosol | 7.67 | 36.36 |
| CDX70657 | Canola | cytosol | 20.77 | 22.41 |
| CDX70551 | Canola | cytosol | 20.13 | 17.5 |
| CDY50376 | Canola | cytosol | 27.16 | 12.2 |
| CDX78660 | Canola | cytosol | 24.28 | 11.46 |
| CDX92471 | Canola | cytosol | 27.16 | 10.86 |
| CDY35813 | Canola | cytosol | 26.2 | 10.47 |
| CDX91288 | Canola | cytosol | 26.2 | 10.43 |
| CDY66172 | Canola | cytosol | 28.75 | 9.13 |
| CDX70641 | Canola | cytosol | 23.32 | 9.1 |
| CDX70658 | Canola | cytosol | 3.51 | 8.59 |
| CDX92086 | Canola | cytosol, endoplasmic reticulum, vacuole | 28.11 | 8.28 |
| CDY43117 | Canola | cytosol | 28.75 | 8.15 |
| CDX92087 | Canola | cytosol | 28.43 | 7.53 |
| CDX97270 | Canola | cytosol | 7.99 | 5.69 |
| CDY44175 | Canola | cytosol | 15.34 | 5.19 |
| CDY22896 | Canola | cytosol | 15.34 | 4.74 |
| CDX70550 | Canola | cytosol | 2.56 | 2.83 |
| CDX70659 | Canola | cytosol | 0.32 | 0.93 |
| CDX98809 | Canola | cytosol | 0.96 | 0.67 |
Protein Annotations
| MapMan:23.1.2.3 | Gene3D:3.40.50.300 | GO:A0A078CUV3 | EnsemblPlants:CDX80936 | ProteinID:CDX80936 | ProteinID:CDX80936.1 |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005525 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006886 |
| GO:GO:0008150 | GO:GO:0009507 | GO:GO:0009527 | GO:GO:0009536 | GO:GO:0009707 | GO:GO:0015031 |
| GO:GO:0015450 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0046872 | GO:GO:0071806 |
| EnsemblPlantsGene:GSBRNA2T00134350001 | InterPro:G_AIG1 | InterPro:IPR006703 | InterPro:P-loop_NTPase | PFAM:PF04548 | PIRSF:PIRSF038134 |
| PFscan:PS51720 | PANTHER:PTHR10903 | PANTHER:PTHR10903:SF43 | SUPFAM:SSF52540 | TIGRFAMs:TIGR00991 | InterPro:Toc34 |
| UniParc:UPI0004EE9CFF | SEG:seg | : | : | : | : |
Description
BnaC03g01900D
Coordinates
chrLK031823:-:914304..916195
Molecular Weight (calculated)
34713.1 Da
IEP (calculated)
9.847
GRAVY (calculated)
-0.130
Length
313 amino acids
Sequence
(BLAST)
(BLAST)
001: MAALLMSREW IGIQQFPSAT QSKLLEILEK FKGEDVSSLT VLVMGKGGVG KSSTVNSVIG ERAAAVSTFQ SDGLRPTLVS RSRSGFTLNI IDTPGLIEGG
101: YVNDQAVNLI KGFLLNKTID VLLYVDRLDV YRVDDLDRQV VTAITDAFGK EIWKKSALVL SHAQFSPPDG LNYDLFVSRR SDALLKLIRG AAQLKKQDMQ
201: GSLIPVILVE NSGRCHKNES DEKILPDGTS WIPNLFKTIT EISFNCNKSI HVDKKLVEGP NPNDRGKRLI PLIFAFQYLL VMKPLVRFIK SDVSRESKPA
301: WEMRDSGSAS RRS
101: YVNDQAVNLI KGFLLNKTID VLLYVDRLDV YRVDDLDRQV VTAITDAFGK EIWKKSALVL SHAQFSPPDG LNYDLFVSRR SDALLKLIRG AAQLKKQDMQ
201: GSLIPVILVE NSGRCHKNES DEKILPDGTS WIPNLFKTIT EISFNCNKSI HVDKKLVEGP NPNDRGKRLI PLIFAFQYLL VMKPLVRFIK SDVSRESKPA
301: WEMRDSGSAS RRS
001: MAALQTLREW IGIQQFPPAT QSKLLEILGK YKEEDVSSLT VLVMGKGGVG KSSTVNSVIG EKAAAVSTFQ SEGLRPTLVS RTRSGFTLNI IDTPGLIEGG
101: YVNDQAINII KRFLLNMTID VLLYVDRLDV YRVDDLDRQV VGAITDAFGK EIWKKSALVL THAQFSPPDG LNYNHFVSKR SNALLKVIQT GAQLKKQDLQ
201: GFSIPVILVE NSGRCHKNES DEKILPCGTS WIPNLFNKIT EISFNGNKAI HVDKKLVEGP NPNERGKKLI PLMFAFQYLL VMKPLVRAIK SDVSRESKPA
301: WELRDSGLAS RRS
101: YVNDQAINII KRFLLNMTID VLLYVDRLDV YRVDDLDRQV VGAITDAFGK EIWKKSALVL THAQFSPPDG LNYNHFVSKR SNALLKVIQT GAQLKKQDLQ
201: GFSIPVILVE NSGRCHKNES DEKILPCGTS WIPNLFNKIT EISFNGNKAI HVDKKLVEGP NPNERGKKLI PLMFAFQYLL VMKPLVRAIK SDVSRESKPA
301: WELRDSGLAS RRS
Arabidopsis Description
TOC34Translocase of chloroplast 34, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q38906]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.