Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra006330.1-P | Field mustard | cytosol | 99.7 | 99.7 |
| CDX70659 | Canola | cytosol | 15.38 | 94.44 |
| CDX70657 | Canola | cytosol | 41.03 | 93.79 |
| CDX70550 | Canola | cytosol | 36.5 | 85.51 |
| CDX70551 | Canola | cytosol | 39.82 | 73.33 |
| CDX70658 | Canola | cytosol | 13.73 | 71.09 |
| CDX97269 | Canola | cytosol | 6.33 | 63.64 |
| CDX70641 | Canola | cytosol | 76.62 | 63.34 |
| CDY66172 | Canola | cytosol | 65.01 | 43.71 |
| HORVU1Hr1G053280.1 | Barley | mitochondrion | 45.4 | 43.19 |
| CDY43117 | Canola | cytosol | 65.46 | 39.31 |
| CDX92086 | Canola | cytosol, endoplasmic reticulum, vacuole | 60.33 | 37.63 |
| CDX92087 | Canola | cytosol | 65.01 | 36.46 |
| AT2G16640.3 | Thale cress | cytosol | 62.59 | 34.41 |
| PGSC0003DMT400024781 | Potato | cytosol | 54.3 | 33.99 |
| EER91974 | Sorghum | cytosol | 49.17 | 32.96 |
| Os10t0548800-01 | Rice | cytosol, plasma membrane, plastid | 50.08 | 32.94 |
| Zm00001d029846_P001 | Maize | plastid | 48.42 | 32.2 |
| Zm00001d047130_P001 | Maize | cytosol | 48.27 | 31.28 |
| CDY50376 | Canola | cytosol | 32.88 | 31.28 |
| Solyc11g043010.1.1 | Tomato | nucleus | 33.94 | 30.91 |
| KRH24252 | Soybean | mitochondrion | 56.11 | 30.72 |
| TraesCS1B01G222000.1 | Wheat | cytosol | 47.81 | 29.52 |
| VIT_03s0038g02070.t01 | Wine grape | nucleus | 56.71 | 29.49 |
| TraesCS1D01G211300.1 | Wheat | cytosol, golgi | 47.66 | 29.42 |
| TraesCS1A01G208000.1 | Wheat | cytosol | 47.36 | 29.4 |
| KRH29257 | Soybean | endoplasmic reticulum | 56.56 | 27.43 |
| PGSC0003DMT400004034 | Potato | cytosol | 55.81 | 27.05 |
| Solyc01g111240.2.1 | Tomato | nucleus | 54.6 | 26.99 |
| CDX91288 | Canola | cytosol | 30.77 | 25.95 |
| CDY35813 | Canola | cytosol | 30.02 | 25.42 |
| GSMUA_Achr8P19440_001 | Banana | cytosol | 46.0 | 25.4 |
| CDX92471 | Canola | cytosol | 29.86 | 25.29 |
| CDY15228 | Canola | cytosol | 11.31 | 25.17 |
| CDX89987 | Canola | cytosol | 11.31 | 25.17 |
| CDY55323 | Canola | cytosol | 11.16 | 24.92 |
| CDY32453 | Canola | cytosol | 11.16 | 24.92 |
| CDX97270 | Canola | cytosol | 16.29 | 24.6 |
| CDY52130 | Canola | cytosol, plastid | 11.61 | 24.6 |
| CDX98810 | Canola | cytosol | 11.61 | 24.6 |
| CDX80936 | Canola | cytosol | 11.46 | 24.28 |
| GSMUA_Achr11P... | Banana | cytosol | 45.4 | 21.35 |
| CDX70178 | Canola | cytosol | 13.88 | 12.12 |
| CDY44175 | Canola | cytosol | 12.97 | 9.31 |
| CDY22896 | Canola | cytosol | 13.27 | 8.69 |
| CDX98809 | Canola | cytosol | 2.56 | 3.78 |
Protein Annotations
| EnsemblPlants:CDX78660 | EnsemblPlantsGene:GSBRNA2T00130082001 | Gene3D:3.40.50.300 | GO:A0A078CP84 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005525 | InterPro:G_AIG1 | InterPro:IPR006703 | InterPro:P-loop_NTPase | InterPro:TOC159_MAD |
| PANTHER:PTHR10903 | PANTHER:PTHR10903:SF47 | PFAM:PF04548 | PFAM:PF11886 | PFscan:PS51720 | ProteinID:CDX78660 |
| ProteinID:CDX78660.1 | SEG:seg | SUPFAM:SSF52540 | UniParc:UPI0004EEADCB | MapMan:23.1.2.2 | : |
Description
BnaA03g05720D
Coordinates
chrLK031815:+:1711121..1713112
Molecular Weight (calculated)
72531.5 Da
IEP (calculated)
9.398
GRAVY (calculated)
-0.202
Length
663 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEKKNADDR IINDNILIPP AAPVLGLGRG APLLKPTPRR RVNGNVSQHP TTTTAEIDET RVKFLRLSHR LGQTPRNNVV VAQFLSRGSS RVGGAAISMA
101: EQLEGQNHPL DFSCTIMLLG KSGVGKSATI NSIFDDDHAV KKMCTTDAFQ MGTKRVQLVE GFVQGIKVRA IDTPGLSPSW FEQHKNVKTL KSIRAFIKKS
201: PPDVVLYLDR LDTQTQSSID EEMLLLRTIT QFLGPSIWFN AIVGLTHAAS APPDGAASSY GMFVTQRCLA IQQDIRRAAR DLRLVSPVSL VENHPACRTN
301: RAGQRVLPNG QAWKPHLLLL SFASKILAQE NAYDRNYNSR PLVVESTAQP LSLFLSSLLE SHQLPPPFLS SLLESHELPP RCKRLTEAEI SRLSKSQKEQ
401: YPVEFQAELE MEEERRPHID LSNPSLLVTP VLVVPRWDHD IGYDGLSAKG TLVKEKIHMS YSGKVTKNNL MKMKGADVQL EMASLVVHGE EGNRSTSLGF
501: EMQKKTWDEL SCALRSDSNF MKHKAAAGLA ITLLGDSVSA GVKAERKLVA NKRFGIDVCG GGAMTCRGDA AYGGSLEAHL LGSFFLSTLG LSVVDGHRGL
601: AIGGNIQTQV HIGRSSDLTA RANLDSSGAG QVSIRANIFE LLEHAMAVLV PLFKKLLSYY SPN
101: EQLEGQNHPL DFSCTIMLLG KSGVGKSATI NSIFDDDHAV KKMCTTDAFQ MGTKRVQLVE GFVQGIKVRA IDTPGLSPSW FEQHKNVKTL KSIRAFIKKS
201: PPDVVLYLDR LDTQTQSSID EEMLLLRTIT QFLGPSIWFN AIVGLTHAAS APPDGAASSY GMFVTQRCLA IQQDIRRAAR DLRLVSPVSL VENHPACRTN
301: RAGQRVLPNG QAWKPHLLLL SFASKILAQE NAYDRNYNSR PLVVESTAQP LSLFLSSLLE SHQLPPPFLS SLLESHELPP RCKRLTEAEI SRLSKSQKEQ
401: YPVEFQAELE MEEERRPHID LSNPSLLVTP VLVVPRWDHD IGYDGLSAKG TLVKEKIHMS YSGKVTKNNL MKMKGADVQL EMASLVVHGE EGNRSTSLGF
501: EMQKKTWDEL SCALRSDSNF MKHKAAAGLA ITLLGDSVSA GVKAERKLVA NKRFGIDVCG GGAMTCRGDA AYGGSLEAHL LGSFFLSTLG LSVVDGHRGL
601: AIGGNIQTQV HIGRSSDLTA RANLDSSGAG QVSIRANIFE LLEHAMAVLV PLFKKLLSYY SPN
0001: MGDGTEFVVR SDREDKKLAE DRISDEQVVK NELVRSDEVR DDNEDEVFEE AIGSENDEQE EEEDPKRELF ESDDLPLVET LKSSMVEHEV EDFEEAVGDL
0101: DETSSNEGGV KDFTAVGESH GAGEAEFDVL ATKMNGDKGE GGGGGSYDKV ESSLDVVDTT ENATSTNTNG SNLAAEHVGI ENGKTHSFLG NGIASPKNKE
0201: VVAEVIPKDD GIEEPWNDGI EVDNWEERVD GIQTEQEVEE GEGTTENQFE KRTEEEVVEG EGTSKNLFEK QTEQDVVEGE GTSKDLFENG SVCMDSESEA
0301: ERNGETGAAY TSNIVTNASG DNEVSSAVTS SPLEESSSGE KGETEGDSTC LKPEQHLASS PHSYPESTEV HSNSGSPGVT SREHKPVQSA NGGHDVQSPQ
0401: PNKELEKQQS SRVHVDPEIT ENSHVETEPE VVSSVSPTES RSNPAALPPA RPAGLGRASP LLEPASRAPQ QSRVNGNGSH NQFQQAEDST TTEADEHDET
0501: REKLQLIRVK FLRLAHRLGQ TPHNVVVAQV LYRLGLAEQL RGRNGSRVGA FSFDRASAMA EQLEAAGQDP LDFSCTIMVL GKSGVGKSAT INSIFDEVKF
0601: CTDAFQMGTK RVQDVEGLVQ GIKVRVIDTP GLLPSWSDQA KNEKILNSVK AFIKKNPPDI VLYLDRLDMQ SRDSGDMPLL RTISDVFGPS IWFNAIVGLT
0701: HAASVPPDGP NGTASSYDMF VTQRSHVIQQ AIRQAAGDMR LMNPVSLVEN HSACRTNRAG QRVLPNGQVW KPHLLLLSFA SKILAEANAL LKLQDNIPGR
0801: PFAARSKAPP LPFLLSSLLQ SRPQPKLPEQ QYGDEEDEDD LEESSDSDEE SEYDQLPPFK SLTKAQMATL SKSQKKQYLD EMEYREKLLM KKQMKEERKR
0901: RKMFKKFAAE IKDLPDGYSE NVEEESGGPA SVPVPMPDLS LPASFDSDNP THRYRYLDSS NQWLVRPVLE THGWDHDIGY EGVNAERLFV VKEKIPISVS
1001: GQVTKDKKDA NVQLEMASSV KHGEGKSTSL GFDMQTVGKE LAYTLRSETR FNNFRRNKAA AGLSVTHLGD SVSAGLKVED KFIASKWFRI VMSGGAMTSR
1101: GDFAYGGTLE AQLRDKDYPL GRFLTTLGLS VMDWHGDLAI GGNIQSQVPI GRSSNLIARA NLNNRGAGQV SVRVNSSEQL QLAMVAIVPL FKKLLSYYYP
1201: QTQYGQ
0101: DETSSNEGGV KDFTAVGESH GAGEAEFDVL ATKMNGDKGE GGGGGSYDKV ESSLDVVDTT ENATSTNTNG SNLAAEHVGI ENGKTHSFLG NGIASPKNKE
0201: VVAEVIPKDD GIEEPWNDGI EVDNWEERVD GIQTEQEVEE GEGTTENQFE KRTEEEVVEG EGTSKNLFEK QTEQDVVEGE GTSKDLFENG SVCMDSESEA
0301: ERNGETGAAY TSNIVTNASG DNEVSSAVTS SPLEESSSGE KGETEGDSTC LKPEQHLASS PHSYPESTEV HSNSGSPGVT SREHKPVQSA NGGHDVQSPQ
0401: PNKELEKQQS SRVHVDPEIT ENSHVETEPE VVSSVSPTES RSNPAALPPA RPAGLGRASP LLEPASRAPQ QSRVNGNGSH NQFQQAEDST TTEADEHDET
0501: REKLQLIRVK FLRLAHRLGQ TPHNVVVAQV LYRLGLAEQL RGRNGSRVGA FSFDRASAMA EQLEAAGQDP LDFSCTIMVL GKSGVGKSAT INSIFDEVKF
0601: CTDAFQMGTK RVQDVEGLVQ GIKVRVIDTP GLLPSWSDQA KNEKILNSVK AFIKKNPPDI VLYLDRLDMQ SRDSGDMPLL RTISDVFGPS IWFNAIVGLT
0701: HAASVPPDGP NGTASSYDMF VTQRSHVIQQ AIRQAAGDMR LMNPVSLVEN HSACRTNRAG QRVLPNGQVW KPHLLLLSFA SKILAEANAL LKLQDNIPGR
0801: PFAARSKAPP LPFLLSSLLQ SRPQPKLPEQ QYGDEEDEDD LEESSDSDEE SEYDQLPPFK SLTKAQMATL SKSQKKQYLD EMEYREKLLM KKQMKEERKR
0901: RKMFKKFAAE IKDLPDGYSE NVEEESGGPA SVPVPMPDLS LPASFDSDNP THRYRYLDSS NQWLVRPVLE THGWDHDIGY EGVNAERLFV VKEKIPISVS
1001: GQVTKDKKDA NVQLEMASSV KHGEGKSTSL GFDMQTVGKE LAYTLRSETR FNNFRRNKAA AGLSVTHLGD SVSAGLKVED KFIASKWFRI VMSGGAMTSR
1101: GDFAYGGTLE AQLRDKDYPL GRFLTTLGLS VMDWHGDLAI GGNIQSQVPI GRSSNLIARA NLNNRGAGQV SVRVNSSEQL QLAMVAIVPL FKKLLSYYYP
1201: QTQYGQ
Arabidopsis Description
TOC132Translocase of chloroplast 132, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SLF3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.