Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plastid:
21433289
plasma membrane: 28056797 |
msms PMID:
28056797
doi
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os10t0492000-01 | |
| Os10t0492101-00 | |
| Os10t0492300-01 | |
| Os12t0115950-00 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G16620.1 | Os10t0492000-01 | AT1G06950.1 | 15829604 |
| AT3G16620.1 | Os10t0492101-00 | AT1G06950.1 | 15829604 |
| AT3G16620.1 | Os10t0492300-01 | AT1G06950.1 | 15829604 |
| AT3G16620.1 | Os12t0115950-00 | AT3G46740.1 | 15829604 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G053280.1 | Barley | mitochondrion | 60.52 | 87.52 |
| Zm00001d029846_P001 | Maize | plastid | 75.1 | 75.93 |
| EER91974 | Sorghum | cytosol | 73.71 | 75.13 |
| Zm00001d047130_P001 | Maize | cytosol | 73.51 | 72.43 |
| TraesCS1A01G208000.1 | Wheat | cytosol | 75.4 | 71.16 |
| TraesCS1D01G211300.1 | Wheat | cytosol, golgi | 75.69 | 71.04 |
| TraesCS1B01G222000.1 | Wheat | cytosol | 75.5 | 70.86 |
| CDX70657 | Canola | cytosol | 16.67 | 57.93 |
| CDX70659 | Canola | cytosol | 5.65 | 52.78 |
| CDY66172 | Canola | cytosol | 51.09 | 52.23 |
| CDX70551 | Canola | cytosol | 18.25 | 51.11 |
| Bra006330.1-P | Field mustard | cytosol | 32.94 | 50.08 |
| CDX78660 | Canola | cytosol | 32.94 | 50.08 |
| PGSC0003DMT400024781 | Potato | cytosol | 52.58 | 50.05 |
| AT3G16620.1 | Thale cress | cytosol | 51.79 | 47.93 |
| Solyc11g043010.1.1 | Tomato | nucleus | 34.13 | 47.25 |
| CDY43117 | Canola | cytosol | 51.19 | 46.74 |
| Bra022170.1-P | Field mustard | nucleus | 48.71 | 46.19 |
| CDX92086 | Canola | cytosol, endoplasmic reticulum, vacuole | 48.71 | 46.19 |
| CDX70550 | Canola | cytosol | 12.8 | 45.58 |
| KRH24252 | Soybean | mitochondrion | 54.46 | 45.33 |
| AT2G16640.3 | Thale cress | cytosol | 53.77 | 44.94 |
| CDX70641 | Canola | cytosol | 35.32 | 44.39 |
| CDX92087 | Canola | cytosol | 51.69 | 44.08 |
| VIT_03s0038g02070.t01 | Wine grape | nucleus | 55.65 | 44.0 |
| GSMUA_Achr8P19440_001 | Banana | cytosol | 49.21 | 41.3 |
| PGSC0003DMT400004034 | Potato | cytosol | 54.76 | 40.35 |
| KRH29257 | Soybean | endoplasmic reticulum | 54.37 | 40.09 |
| Solyc01g111240.2.1 | Tomato | nucleus | 53.17 | 39.97 |
| CDX70658 | Canola | cytosol | 4.86 | 38.28 |
| Os12t0197400-01 | Rice | mitochondrion | 29.37 | 37.61 |
| GSMUA_Achr11P... | Banana | cytosol | 52.08 | 37.23 |
| Os05t0151400-01 | Rice | plastid | 41.17 | 31.78 |
| Os03t0240500-01 | Rice | plastid | 9.72 | 29.97 |
| Os03t0835100-00 | Rice | cytosol, plastid | 32.74 | 27.36 |
| Os01t0356800-00 | Rice | plastid | 20.83 | 3.93 |
Protein Annotations
| MapMan:23.1.2.2 | Gene3D:3.40.50.300 | EntrezGene:4349303 | ProteinID:AAK43509.1 | ProteinID:AAP54908.1 | ProteinID:BAF27144.1 |
| ProteinID:BAT11933.1 | ProteinID:EAZ16890.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005525 | GO:GO:0016787 | GO:GO:0016817 | InterPro:G_AIG1 | InterPro:IPR006703 | EnsemblPlantsGene:Os10g0548800 |
| EnsemblPlants:Os10t0548800-01 | InterPro:P-loop_NTPase | PFAM:PF04548 | PFAM:PF11886 | PFscan:PS51720 | PANTHER:PTHR10903 |
| PANTHER:PTHR10903:SF47 | UniProt:Q94LU7 | SUPFAM:SSF52540 | TIGRFAMs:TIGR00993 | InterPro:TOC159_MAD | InterPro:Toc86_159 |
| UniParc:UPI00000AA0C8 | RefSeq:XP_015614045.1 | SEG:seg | : | : | : |
Description
Similar to Chloroplast outer envelope protein-like (Chloroplast outer envelope membrane-associated protein Toc120). (Os10t0548800-01)
Coordinates
chr10:-:21473597..21477243
Molecular Weight (calculated)
109109.0 Da
IEP (calculated)
4.631
GRAVY (calculated)
-0.498
Length
1008 amino acids
Sequence
(BLAST)
(BLAST)
0001: MESGGVDGER PLLREAGDLG GEDGGAGGVP EEGDAKGDVM AAAAAQGGDG DEGVEAVDGD GSNEEEEVVQ TPDVKQTPGA AAAAAWREAA WEEADGEEFV
0101: DVLEGDVDEK REDGSALENG EDLLASRSLA VEGDEEGYGS CADIGIEEDA EGDASRERLE EEAMTESIRE YVTEAVLADH IQEQPDKSKS ESEHVKVAQH
0201: KSQIAKSREE GPKQSGGEPS VVVEELNGSS SSDDESKATS APPARSISGA AGRSNGPSLP SRPAGLGAST SLSQPSARPV QQTRANGPVA VDRETRQDVE
0301: SPEDGDENDE IREKLQMIRV KFLRLANRFG QTPNNMVVSQ VLYRLGLAEQ LRRNTGQGVF SFDRAQDMAE RLEAAGNEPL DFSCTILVLG KTGVGKSATI
0401: NSIFDDVRLE TNAFDTSTRK VQEVVGAVEG IKVKVIDTPG LSCSSSDQHH NQKILNSVKR LISRNPPDIV LYFDRLDMQT RDYGDVPLLQ TITRVFGASI
0501: WFNAIVVLTH AASAPPDGLN GIPLSYEMFV TQRSHVVQQA IRQAAGDVRL MNPVSLVENH SACRTNRAGQ RVLPNGHVWK PQLLLLCFAS KVLAEANALL
0601: KLQDNPAGKP RMRIPPLPFL LSSLLQSRAP LKLPEEQFGD DDDIEDDLAD DSDSDDGSDY DDLPPFKRLT KAQLAKLNHA QRKAYLEELD YREKLFYKKQ
0701: LKEERMRRKI MKKMAAEASA RTDDFSNSNL EDDGSAPTNV AVPMPDMVLP SSFDSDHPSH RYRFLDTPSE WLVRPVLETQ GWDHDVGYEG LNVERLFAVK
0801: GKVPLSVSGQ LSKDKKDCSL QMEVASSLKH GEGKTTSLGL DLQSVGKDMA YTLRGESRFK NFRRNNTAAG ISATLLGDSV SAGVKVEDKL VVNKQLRVLV
0901: SGGAMSGRGD VAYGGRLEAT LKDKDYPIGR MLSTIALSVV DWHGDLAVGC NIQSQIPAGR ASNLIGHANL SNKGTGQVGI RLNSSEHLEI ALIALVPIYQ
1001: NIKKLLQS
0101: DVLEGDVDEK REDGSALENG EDLLASRSLA VEGDEEGYGS CADIGIEEDA EGDASRERLE EEAMTESIRE YVTEAVLADH IQEQPDKSKS ESEHVKVAQH
0201: KSQIAKSREE GPKQSGGEPS VVVEELNGSS SSDDESKATS APPARSISGA AGRSNGPSLP SRPAGLGAST SLSQPSARPV QQTRANGPVA VDRETRQDVE
0301: SPEDGDENDE IREKLQMIRV KFLRLANRFG QTPNNMVVSQ VLYRLGLAEQ LRRNTGQGVF SFDRAQDMAE RLEAAGNEPL DFSCTILVLG KTGVGKSATI
0401: NSIFDDVRLE TNAFDTSTRK VQEVVGAVEG IKVKVIDTPG LSCSSSDQHH NQKILNSVKR LISRNPPDIV LYFDRLDMQT RDYGDVPLLQ TITRVFGASI
0501: WFNAIVVLTH AASAPPDGLN GIPLSYEMFV TQRSHVVQQA IRQAAGDVRL MNPVSLVENH SACRTNRAGQ RVLPNGHVWK PQLLLLCFAS KVLAEANALL
0601: KLQDNPAGKP RMRIPPLPFL LSSLLQSRAP LKLPEEQFGD DDDIEDDLAD DSDSDDGSDY DDLPPFKRLT KAQLAKLNHA QRKAYLEELD YREKLFYKKQ
0701: LKEERMRRKI MKKMAAEASA RTDDFSNSNL EDDGSAPTNV AVPMPDMVLP SSFDSDHPSH RYRFLDTPSE WLVRPVLETQ GWDHDVGYEG LNVERLFAVK
0801: GKVPLSVSGQ LSKDKKDCSL QMEVASSLKH GEGKTTSLGL DLQSVGKDMA YTLRGESRFK NFRRNNTAAG ISATLLGDSV SAGVKVEDKL VVNKQLRVLV
0901: SGGAMSGRGD VAYGGRLEAT LKDKDYPIGR MLSTIALSVV DWHGDLAVGC NIQSQIPAGR ASNLIGHANL SNKGTGQVGI RLNSSEHLEI ALIALVPIYQ
1001: NIKKLLQS
0001: MGDGTEFVVR SDREDKKLAE DRISDEQVVK NELVRSDEVR DDNEDEVFEE AIGSENDEQE EEEDPKRELF ESDDLPLVET LKSSMVEHEV EDFEEAVGDL
0101: DETSSNEGGV KDFTAVGESH GAGEAEFDVL ATKMNGDKGE GGGGGSYDKV ESSLDVVDTT ENATSTNTNG SNLAAEHVGI ENGKTHSFLG NGIASPKNKE
0201: VVAEVIPKDD GIEEPWNDGI EVDNWEERVD GIQTEQEVEE GEGTTENQFE KRTEEEVVEG EGTSKNLFEK QTEQDVVEGE GTSKDLFENG SVCMDSESEA
0301: ERNGETGAAY TSNIVTNASG DNEVSSAVTS SPLEESSSGE KGETEGDSTC LKPEQHLASS PHSYPESTEV HSNSGSPGVT SREHKPVQSA NGGHDVQSPQ
0401: PNKELEKQQS SRVHVDPEIT ENSHVETEPE VVSSVSPTES RSNPAALPPA RPAGLGRASP LLEPASRAPQ QSRVNGNGSH NQFQQAEDST TTEADEHDET
0501: REKLQLIRVK FLRLAHRLGQ TPHNVVVAQV LYRLGLAEQL RGRNGSRVGA FSFDRASAMA EQLEAAGQDP LDFSCTIMVL GKSGVGKSAT INSIFDEVKF
0601: CTDAFQMGTK RVQDVEGLVQ GIKVRVIDTP GLLPSWSDQA KNEKILNSVK AFIKKNPPDI VLYLDRLDMQ SRDSGDMPLL RTISDVFGPS IWFNAIVGLT
0701: HAASVPPDGP NGTASSYDMF VTQRSHVIQQ AIRQAAGDMR LMNPVSLVEN HSACRTNRAG QRVLPNGQVW KPHLLLLSFA SKILAEANAL LKLQDNIPGR
0801: PFAARSKAPP LPFLLSSLLQ SRPQPKLPEQ QYGDEEDEDD LEESSDSDEE SEYDQLPPFK SLTKAQMATL SKSQKKQYLD EMEYREKLLM KKQMKEERKR
0901: RKMFKKFAAE IKDLPDGYSE NVEEESGGPA SVPVPMPDLS LPASFDSDNP THRYRYLDSS NQWLVRPVLE THGWDHDIGY EGVNAERLFV VKEKIPISVS
1001: GQVTKDKKDA NVQLEMASSV KHGEGKSTSL GFDMQTVGKE LAYTLRSETR FNNFRRNKAA AGLSVTHLGD SVSAGLKVED KFIASKWFRI VMSGGAMTSR
1101: GDFAYGGTLE AQLRDKDYPL GRFLTTLGLS VMDWHGDLAI GGNIQSQVPI GRSSNLIARA NLNNRGAGQV SVRVNSSEQL QLAMVAIVPL FKKLLSYYYP
1201: QTQYGQ
0101: DETSSNEGGV KDFTAVGESH GAGEAEFDVL ATKMNGDKGE GGGGGSYDKV ESSLDVVDTT ENATSTNTNG SNLAAEHVGI ENGKTHSFLG NGIASPKNKE
0201: VVAEVIPKDD GIEEPWNDGI EVDNWEERVD GIQTEQEVEE GEGTTENQFE KRTEEEVVEG EGTSKNLFEK QTEQDVVEGE GTSKDLFENG SVCMDSESEA
0301: ERNGETGAAY TSNIVTNASG DNEVSSAVTS SPLEESSSGE KGETEGDSTC LKPEQHLASS PHSYPESTEV HSNSGSPGVT SREHKPVQSA NGGHDVQSPQ
0401: PNKELEKQQS SRVHVDPEIT ENSHVETEPE VVSSVSPTES RSNPAALPPA RPAGLGRASP LLEPASRAPQ QSRVNGNGSH NQFQQAEDST TTEADEHDET
0501: REKLQLIRVK FLRLAHRLGQ TPHNVVVAQV LYRLGLAEQL RGRNGSRVGA FSFDRASAMA EQLEAAGQDP LDFSCTIMVL GKSGVGKSAT INSIFDEVKF
0601: CTDAFQMGTK RVQDVEGLVQ GIKVRVIDTP GLLPSWSDQA KNEKILNSVK AFIKKNPPDI VLYLDRLDMQ SRDSGDMPLL RTISDVFGPS IWFNAIVGLT
0701: HAASVPPDGP NGTASSYDMF VTQRSHVIQQ AIRQAAGDMR LMNPVSLVEN HSACRTNRAG QRVLPNGQVW KPHLLLLSFA SKILAEANAL LKLQDNIPGR
0801: PFAARSKAPP LPFLLSSLLQ SRPQPKLPEQ QYGDEEDEDD LEESSDSDEE SEYDQLPPFK SLTKAQMATL SKSQKKQYLD EMEYREKLLM KKQMKEERKR
0901: RKMFKKFAAE IKDLPDGYSE NVEEESGGPA SVPVPMPDLS LPASFDSDNP THRYRYLDSS NQWLVRPVLE THGWDHDIGY EGVNAERLFV VKEKIPISVS
1001: GQVTKDKKDA NVQLEMASSV KHGEGKSTSL GFDMQTVGKE LAYTLRSETR FNNFRRNKAA AGLSVTHLGD SVSAGLKVED KFIASKWFRI VMSGGAMTSR
1101: GDFAYGGTLE AQLRDKDYPL GRFLTTLGLS VMDWHGDLAI GGNIQSQVPI GRSSNLIARA NLNNRGAGQV SVRVNSSEQL QLAMVAIVPL FKKLLSYYYP
1201: QTQYGQ
Arabidopsis Description
TOC132Translocase of chloroplast 132, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SLF3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.