Factsheet for Bra006330.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78660	Canola	cytosol	99.7	99.7
HORVU1Hr1G053280.1	Barley	mitochondrion	45.7	43.47
Bra022170.1-P	Field mustard	nucleus	60.33	37.63
AT2G16640.3	Thale cress	cytosol	62.59	34.41
PGSC0003DMT400024781	Potato	cytosol	54.3	33.99
Os10t0548800-01	Rice	cytosol, plasma membrane, plastid	50.08	32.94
EER91974	Sorghum	cytosol	48.87	32.76
Zm00001d029846_P001	Maize	plastid	48.11	32.0
Zm00001d047130_P001	Maize	cytosol	48.11	31.18
Solyc11g043010.1.1	Tomato	nucleus	33.94	30.91
KRH24252	Soybean	mitochondrion	56.11	30.72
TraesCS1B01G222000.1	Wheat	cytosol	48.11	29.7
VIT_03s0038g02070.t01	Wine grape	nucleus	57.01	29.65
TraesCS1D01G211300.1	Wheat	cytosol, golgi	47.96	29.61
TraesCS1A01G208000.1	Wheat	cytosol	47.66	29.59
KRH29257	Soybean	endoplasmic reticulum	56.56	27.43
PGSC0003DMT400004034	Potato	cytosol	55.81	27.05
Solyc01g111240.2.1	Tomato	nucleus	54.6	26.99
Bra002291.1-P	Field mustard	cytosol	30.17	25.54
GSMUA_Achr8P19440_001	Banana	cytosol	46.0	25.4
Bra033311.1-P	Field mustard	cytosol	11.31	25.17
Bra032612.1-P	Field mustard	cytosol	11.16	24.92
Bra018546.1-P	Field mustard	mitochondrion	33.48	24.89
GSMUA_Achr11P...	Banana	cytosol	45.4	21.35
Bra036261.1-P	Field mustard	nucleus	38.91	16.6
Bra033515.1-P	Field mustard	cytosol	20.36	12.25
Bra009405.1-P	Field mustard	cytosol	13.42	11.95

Protein Annotations

MapMan:23.1.2.2	Gene3D:3.40.50.300	EnsemblPlantsGene:Bra006330	EnsemblPlants:Bra006330.1	EnsemblPlants:Bra006330.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0009536	GO:GO:0009707	GO:GO:0016020	GO:GO:0051087
GO:GO:0051117	InterPro:G_AIG1	InterPro:IPR006703	UniProt:M4CQ41	InterPro:P-loop_NTPase	PFAM:PF04548
PFAM:PF11886	PFscan:PS51720	PANTHER:PTHR10903	PANTHER:PTHR10903:SF47	SUPFAM:SSF52540	InterPro:TOC159_MAD
UniParc:UPI000253F589	SEG:seg	:	:	:	:

Description

AT3G16620 (E=3e-108) ATTOC120, TOC120 | ATTOC120; GTP binding

Coordinates

chrA03:+:3043969..3045960

Molecular Weight (calculated)

72503.4 Da

IEP (calculated)

9.398

GRAVY (calculated)

-0.201

Length

663 amino acids

Sequence
(BLAST)

001: MEEKKNADDR IINDNILIPP AAPVLGLGRG APLLKPTPRR RVNGNVSQHP TTTTAEIDET RVKFLRLSHR LGQTPRNNVV VAQFLSRGSS RVGGAAISMA
101: EQLEGQNHPL DFSCTIMLLG KSGVGKSATI NSIFDDDHAV KKMCTTDAFQ MGTKRVQLVE GFVQGIKVRA IDTPGLSPSW FDQHKNVKTL KSIRAFIKKS
201: PPDVVLYLDR LDTQTQSSID EEMLLLRTIT QFLGPSIWFN AIVGLTHAAS APPDGAASSY GMFVTQRCLA IQQDIRRAAR DLRLVSPVSL VENHPACRTN
301: RAGQRVLPNG QAWKPHLLLL SFASKILAQE NAYDRNYNSR PLVVESTAQP LSLFLSSLLE SHQLPPPFLS SLLESHELPP RCKRLTEAEI SRLSKSQKEQ
401: YPVEFQAELE MEEERRPHID LSNPSLLVTP VLVVPRWDHD IGYDGLSAKG TLVKEKIHMS YSGKVTKNNL MKMKGADVQL EMASLVVHGE EGNRSTSVGF
501: EMQKKTWDEL SCALRSDSNF MKHKAAAGLA ITLLGDSVSA GVKAERKLVA NKRFGIDVCG GGAMTCRGDA AYGGSLEAHL LGSFFLSTLG LSVVDGHRGL
601: AIGGNIQTQV HIGRSSDLTA RANLDSSGAG QVSIRANIFE LLEHAMAVLV PLFKKLLSYY SPN

Best Arabidopsis Sequence Match ( AT3G16620.1 )
(BLAST)

0001: MGDGAEIVTR LYGDEKKLAE DGRISELVGS DEVKDNEEEV FEEAIGSQEG LKPESLKTDV LQEDFPLASN DEVCDLEETS RNERGVENLK VNYSEIGESH
0101: GEVNEQCITT KEADSDLVTL KMNDYDHGEV ADADISYGKM ASSLDVVENS EKATSNLATE DVNLENGNTH SSSENGVVSP DENKELVAEV ISVSACSVET
0201: GSNGIDDEKW EEEIDVSAGM VTEQRNGKTG AEFNSVKIVS GDKSLNDSIE VAAGTLSPLE KSSSEEKGET ESQNSNGGHD IQSNKEIVKQ QDSSVNIGPE
0301: IKESQHMERE SEVLSSVSPT ESRSDTAALP PARPAGLGRA APLLEPAPRV TQQPRVNGNV SHNQPQQAED STTAETDEHD ETREKLQFIR VKFLRLSHRL
0401: GQTPHNVVVA QVLYRLGLAE QLRGRNGSRV GAFSFDRASA MAEQLEAAAQ DPLDFSCTIM VLGKSGVGKS ATINSIFDEL KISTDAFQVG TKKVQDIEGF
0501: VQGIKVRVID TPGLLPSWSD QHKNEKILKS VRAFIKKSPP DIVLYLDRLD MQSRDSGDMP LLRTITDVFG PSIWFNAIVG LTHAASAPPD GPNGTASSYD
0601: MFVTQRSHVI QQAIRQAAGD MRLMNPVSLV ENHSACRTNR AGQRVLPNGQ VWKPHLLLLS FASKILAEAN ALLKLQDNIP GGQFATRSKA PPLPLLLSSL
0701: LQSRPQAKLP EQQYDDEDDE DDLDESSDSE EESEYDELPP FKRLTKAEMT KLSKSQKKEY LDEMEYREKL FMKRQMKEER KRRKLLKKFA AEIKDMPNGY
0801: SENVEEERSE PASVPVPMPD LSLPASFDSD NPTHRYRYLD TSNQWLVRPV LETHGWDHDI GYEGVNAERL FVVKDKIPVS FSGQVTKDKK DAHVQLELAS
0901: SVKHGEGRST SLGFDMQNAG KELAYTIRSE TRFNKFRKNK AAAGLSVTLL GDSVSAGLKV EDKLIANKRF RMVMSGGAMT SRGDVAYGGT LEAQFRDKDY
1001: PLGRFLSTLG LSVMDWHGDL AIGGNIQSQV PIGRSSNLIA RANLNNRGAG QVSIRVNSSE QLQLAVVALV PLFKKLLTYY SPEQMQYGH

Arabidopsis Description

TOC120Translocase of chloroplast 120, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LUS2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.