Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| GSMUA_Achr11P... | |
| GSMUA_Achr9P03850_001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G16620.1 | GSMUA_Achr11P... | AT1G06950.1 | 15829604 |
| AT3G16620.1 | GSMUA_Achr9P03850_001 | AT3G46740.1 | 15829604 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G053280.1 | Barley | mitochondrion | 31.56 | 63.85 |
| GSMUA_Achr8P19440_001 | Banana | cytosol | 49.29 | 57.87 |
| CDX70657 | Canola | cytosol | 11.56 | 56.21 |
| Zm00001d029846_P001 | Maize | plastid | 37.16 | 52.56 |
| Os10t0548800-01 | Rice | cytosol, plasma membrane, plastid | 37.23 | 52.08 |
| EER91974 | Sorghum | cytosol | 36.52 | 52.07 |
| Zm00001d047130_P001 | Maize | cytosol | 36.67 | 50.54 |
| CDY66172 | Canola | cytosol | 34.75 | 49.7 |
| PGSC0003DMT400024781 | Potato | cytosol | 36.88 | 49.1 |
| CDX70551 | Canola | cytosol | 12.48 | 48.89 |
| TraesCS1A01G208000.1 | Wheat | cytosol | 36.38 | 48.03 |
| TraesCS1D01G211300.1 | Wheat | cytosol, golgi | 36.45 | 47.86 |
| TraesCS1B01G222000.1 | Wheat | cytosol | 36.45 | 47.86 |
| AT3G16620.1 | Thale cress | cytosol | 36.31 | 47.02 |
| CDY43117 | Canola | cytosol | 36.52 | 46.65 |
| Bra006330.1-P | Field mustard | cytosol | 21.35 | 45.4 |
| CDX78660 | Canola | cytosol | 21.35 | 45.4 |
| KRH24252 | Soybean | mitochondrion | 38.37 | 44.67 |
| VIT_03s0038g02070.t01 | Wine grape | nucleus | 39.79 | 44.0 |
| CDX92086 | Canola | cytosol, endoplasmic reticulum, vacuole | 33.05 | 43.84 |
| Bra022170.1-P | Field mustard | nucleus | 33.05 | 43.84 |
| Solyc11g043010.1.1 | Tomato | nucleus | 22.48 | 43.54 |
| CDX70659 | Canola | cytosol | 3.33 | 43.52 |
| AT2G16640.3 | Thale cress | cytosol | 36.74 | 42.95 |
| CDX92087 | Canola | cytosol | 35.53 | 42.39 |
| CDX70641 | Canola | cytosol | 23.9 | 42.02 |
| CDX70550 | Canola | cytosol | 8.37 | 41.7 |
| KRH29257 | Soybean | endoplasmic reticulum | 38.72 | 39.94 |
| CDX70658 | Canola | cytosol | 3.62 | 39.84 |
| PGSC0003DMT400004034 | Potato | cytosol | 37.59 | 38.74 |
| Solyc01g111240.2.1 | Tomato | nucleus | 36.6 | 38.48 |
| GSMUA_Achr9P31010_001 | Banana | cytosol | 25.6 | 36.5 |
| GSMUA_Achr1P22210_001 | Banana | cytosol | 3.48 | 35.25 |
| GSMUA_Achr1P09910_001 | Banana | mitochondrion | 18.58 | 34.56 |
| GSMUA_Achr9P31000_001 | Banana | cytosol | 25.82 | 33.33 |
| GSMUA_AchrUn_... | Banana | cytosol | 6.52 | 29.49 |
| GSMUA_Achr6P20360_001 | Banana | cytosol | 22.41 | 27.94 |
Protein Annotations
| MapMan:15.5.32 | MapMan:23.1.2.2 | MapMan:25.4.1.4 | Gene3D:3.40.50.300 | Gene3D:4.10.280.10 | ncoils:Coil |
| GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005525 | GO:GO:0046983 |
| EnsemblPlantsGene:GSMUA_Achr11G16630_001 | EnsemblPlants:GSMUA_Achr11P16630_001 | EnsemblPlants:GSMUA_Achr11T16630_001 | InterPro:G_AIG1 | InterPro:HLH_DNA-bd_sf | InterPro:IPR006703 |
| InterPro:IPR011598 | InterPro:IPR036638 | UniProt:M0RSU3 | InterPro:P-loop_NTPase | PFAM:PF00010 | PFAM:PF04548 |
| PFAM:PF11886 | PFscan:PS50888 | PFscan:PS51720 | PANTHER:PTHR10903 | PANTHER:PTHR10903:SF47 | SMART:SM00353 |
| SUPFAM:SSF47459 | SUPFAM:SSF52540 | InterPro:TOC159_MAD | UniParc:UPI000294B07A | InterPro:bHLH_dom | SEG:seg |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr11G16630_001]
Coordinates
chr11:-:18340062..18353624
Molecular Weight (calculated)
153813.0 Da
IEP (calculated)
4.791
GRAVY (calculated)
-0.636
Length
1410 amino acids
Sequence
(BLAST)
(BLAST)
0001: MENGAGAAKD ECRPGQMGLE MAAENGDSQR ELAGGADGGP PKSEDGSKDL GENEVFEEAM EAPQHLVHDS HVGMVIEPEG VVEPADLRVG EKNLEVEMVG
0101: SEGYIDSTDA AGHDQRPDEQ EMVGLVKLDG APGVEGNGQE DSVSFDKLDA STGSQHTDQS SEEQVAVESE EGMPACDESD GELGKGEDEK EFMLGKLNSV
0201: VPDSKDGKGM DEVTNGSSEI VNDREISVGD GNTELVGKKS EIEEPEMVRL DGLADLLDEG SENGQSLEVT SDECGADNDA ESHQVSTQQM KDISAQSLAV
0301: SEEPSKVPQL KDNSAEDNYG FATNGHAAVQ KEGGSFATNG HATMEKQDGS SCSHVTSAAN DSYVKDDKAV MHETTKKLQK ESVENLGHLS STSSDNKRSS
0401: SPSALPSTLN HENSGGPGLS SRPAGLGSSA PLLEPSVRSL QQPRTNGSAP RRVSQPSEEP PNDDGEENDE TREKLQMIRV KFLRLAHRLG QTPHNVVVAQ
0501: VLYRLGLAEQ LKRNTNRPGV FSFDRASVVA EQLEAAGQET LDFSCTIMVI GKTGVGKSAT INSIFDEVKL PTDAFQVGTK KVQEVVGMVQ GIKVRVIDTP
0601: GLFSSSLDQN RNEKTLHSVK RFINKTPPDI VLYFDRLDMQ SRDYGDAPLL RTITDIFGAS IWFNAIVVLT HAASAPPDGP NGSPLTYEMF VTQRSHVVQQ
0701: AIRQAAGDVR LMNPVSLVEN HSACRMNRAG QRANMLLKLQ DGPPGRTFGS RPRVPPLPFL LSSLLQSRPP PKLPEEQLGD DDNLDEDLGE ISDSDEGSDY
0801: DELPPFKPLT NGPASVPVPM PDFVLPNSFD SDNPTHRYRF LDSSSQWLVR PVLDSQGWDH DIGYEGLNVE RVFVIKDKMP LSVSGQLTKD KKECSLQMEV
0901: ASSIKHSESK STSLCLDMQT VGKDVAYTLR GDTRFKNFRR NNTAAGVSVT VLGDSLSAGL KFEDKLMISQ RLRVLMSGGA MTGRGDVAYG GRLEATLRDK
1001: DYPIRQALST LQLSIMDWHG DLTLGCNVQS QLPLDRGTNL IGHANLSNKG TGQIGIRLNS SEHFQIVLLA LFPIIRNVQK ILFNHTFPLL SPFILLTRNI
1101: FVFLSNSHRV DKDSVAARKV QKADREKLRR DRLNEQFLEL GNALDPDRPK NDKATILGDT IQMLKDLTAQ VNRLKSEYNS LSEESRELTQ EKNELRDEKA
1201: KLKSEIDDLN VQYQQRLRVF YPWATMDPSL VIGRPPYPFP MPVPIPSAAI PIHPVHSYPF FHGPIPGTIS NPCSTYMPNS PSNPQVEQSS NQHINQNMHI
1301: KDSRSQTSSH QDSKSKPSDQ HQRNSGQRSD DFSDVATELE LKTPGSAVHS QSTSAHDEDL SSEMRKGKQL PQHKGSGAST CSSSSRCSSS CSVPDDNSND
1401: VRDGSGPEKQ
0101: SEGYIDSTDA AGHDQRPDEQ EMVGLVKLDG APGVEGNGQE DSVSFDKLDA STGSQHTDQS SEEQVAVESE EGMPACDESD GELGKGEDEK EFMLGKLNSV
0201: VPDSKDGKGM DEVTNGSSEI VNDREISVGD GNTELVGKKS EIEEPEMVRL DGLADLLDEG SENGQSLEVT SDECGADNDA ESHQVSTQQM KDISAQSLAV
0301: SEEPSKVPQL KDNSAEDNYG FATNGHAAVQ KEGGSFATNG HATMEKQDGS SCSHVTSAAN DSYVKDDKAV MHETTKKLQK ESVENLGHLS STSSDNKRSS
0401: SPSALPSTLN HENSGGPGLS SRPAGLGSSA PLLEPSVRSL QQPRTNGSAP RRVSQPSEEP PNDDGEENDE TREKLQMIRV KFLRLAHRLG QTPHNVVVAQ
0501: VLYRLGLAEQ LKRNTNRPGV FSFDRASVVA EQLEAAGQET LDFSCTIMVI GKTGVGKSAT INSIFDEVKL PTDAFQVGTK KVQEVVGMVQ GIKVRVIDTP
0601: GLFSSSLDQN RNEKTLHSVK RFINKTPPDI VLYFDRLDMQ SRDYGDAPLL RTITDIFGAS IWFNAIVVLT HAASAPPDGP NGSPLTYEMF VTQRSHVVQQ
0701: AIRQAAGDVR LMNPVSLVEN HSACRMNRAG QRANMLLKLQ DGPPGRTFGS RPRVPPLPFL LSSLLQSRPP PKLPEEQLGD DDNLDEDLGE ISDSDEGSDY
0801: DELPPFKPLT NGPASVPVPM PDFVLPNSFD SDNPTHRYRF LDSSSQWLVR PVLDSQGWDH DIGYEGLNVE RVFVIKDKMP LSVSGQLTKD KKECSLQMEV
0901: ASSIKHSESK STSLCLDMQT VGKDVAYTLR GDTRFKNFRR NNTAAGVSVT VLGDSLSAGL KFEDKLMISQ RLRVLMSGGA MTGRGDVAYG GRLEATLRDK
1001: DYPIRQALST LQLSIMDWHG DLTLGCNVQS QLPLDRGTNL IGHANLSNKG TGQIGIRLNS SEHFQIVLLA LFPIIRNVQK ILFNHTFPLL SPFILLTRNI
1101: FVFLSNSHRV DKDSVAARKV QKADREKLRR DRLNEQFLEL GNALDPDRPK NDKATILGDT IQMLKDLTAQ VNRLKSEYNS LSEESRELTQ EKNELRDEKA
1201: KLKSEIDDLN VQYQQRLRVF YPWATMDPSL VIGRPPYPFP MPVPIPSAAI PIHPVHSYPF FHGPIPGTIS NPCSTYMPNS PSNPQVEQSS NQHINQNMHI
1301: KDSRSQTSSH QDSKSKPSDQ HQRNSGQRSD DFSDVATELE LKTPGSAVHS QSTSAHDEDL SSEMRKGKQL PQHKGSGAST CSSSSRCSSS CSVPDDNSND
1401: VRDGSGPEKQ
0001: MGDGTEFVVR SDREDKKLAE DRISDEQVVK NELVRSDEVR DDNEDEVFEE AIGSENDEQE EEEDPKRELF ESDDLPLVET LKSSMVEHEV EDFEEAVGDL
0101: DETSSNEGGV KDFTAVGESH GAGEAEFDVL ATKMNGDKGE GGGGGSYDKV ESSLDVVDTT ENATSTNTNG SNLAAEHVGI ENGKTHSFLG NGIASPKNKE
0201: VVAEVIPKDD GIEEPWNDGI EVDNWEERVD GIQTEQEVEE GEGTTENQFE KRTEEEVVEG EGTSKNLFEK QTEQDVVEGE GTSKDLFENG SVCMDSESEA
0301: ERNGETGAAY TSNIVTNASG DNEVSSAVTS SPLEESSSGE KGETEGDSTC LKPEQHLASS PHSYPESTEV HSNSGSPGVT SREHKPVQSA NGGHDVQSPQ
0401: PNKELEKQQS SRVHVDPEIT ENSHVETEPE VVSSVSPTES RSNPAALPPA RPAGLGRASP LLEPASRAPQ QSRVNGNGSH NQFQQAEDST TTEADEHDET
0501: REKLQLIRVK FLRLAHRLGQ TPHNVVVAQV LYRLGLAEQL RGRNGSRVGA FSFDRASAMA EQLEAAGQDP LDFSCTIMVL GKSGVGKSAT INSIFDEVKF
0601: CTDAFQMGTK RVQDVEGLVQ GIKVRVIDTP GLLPSWSDQA KNEKILNSVK AFIKKNPPDI VLYLDRLDMQ SRDSGDMPLL RTISDVFGPS IWFNAIVGLT
0701: HAASVPPDGP NGTASSYDMF VTQRSHVIQQ AIRQAAGDMR LMNPVSLVEN HSACRTNRAG QRVLPNGQVW KPHLLLLSFA SKILAEANAL LKLQDNIPGR
0801: PFAARSKAPP LPFLLSSLLQ SRPQPKLPEQ QYGDEEDEDD LEESSDSDEE SEYDQLPPFK SLTKAQMATL SKSQKKQYLD EMEYREKLLM KKQMKEERKR
0901: RKMFKKFAAE IKDLPDGYSE NVEEESGGPA SVPVPMPDLS LPASFDSDNP THRYRYLDSS NQWLVRPVLE THGWDHDIGY EGVNAERLFV VKEKIPISVS
1001: GQVTKDKKDA NVQLEMASSV KHGEGKSTSL GFDMQTVGKE LAYTLRSETR FNNFRRNKAA AGLSVTHLGD SVSAGLKVED KFIASKWFRI VMSGGAMTSR
1101: GDFAYGGTLE AQLRDKDYPL GRFLTTLGLS VMDWHGDLAI GGNIQSQVPI GRSSNLIARA NLNNRGAGQV SVRVNSSEQL QLAMVAIVPL FKKLLSYYYP
1201: QTQYGQ
0101: DETSSNEGGV KDFTAVGESH GAGEAEFDVL ATKMNGDKGE GGGGGSYDKV ESSLDVVDTT ENATSTNTNG SNLAAEHVGI ENGKTHSFLG NGIASPKNKE
0201: VVAEVIPKDD GIEEPWNDGI EVDNWEERVD GIQTEQEVEE GEGTTENQFE KRTEEEVVEG EGTSKNLFEK QTEQDVVEGE GTSKDLFENG SVCMDSESEA
0301: ERNGETGAAY TSNIVTNASG DNEVSSAVTS SPLEESSSGE KGETEGDSTC LKPEQHLASS PHSYPESTEV HSNSGSPGVT SREHKPVQSA NGGHDVQSPQ
0401: PNKELEKQQS SRVHVDPEIT ENSHVETEPE VVSSVSPTES RSNPAALPPA RPAGLGRASP LLEPASRAPQ QSRVNGNGSH NQFQQAEDST TTEADEHDET
0501: REKLQLIRVK FLRLAHRLGQ TPHNVVVAQV LYRLGLAEQL RGRNGSRVGA FSFDRASAMA EQLEAAGQDP LDFSCTIMVL GKSGVGKSAT INSIFDEVKF
0601: CTDAFQMGTK RVQDVEGLVQ GIKVRVIDTP GLLPSWSDQA KNEKILNSVK AFIKKNPPDI VLYLDRLDMQ SRDSGDMPLL RTISDVFGPS IWFNAIVGLT
0701: HAASVPPDGP NGTASSYDMF VTQRSHVIQQ AIRQAAGDMR LMNPVSLVEN HSACRTNRAG QRVLPNGQVW KPHLLLLSFA SKILAEANAL LKLQDNIPGR
0801: PFAARSKAPP LPFLLSSLLQ SRPQPKLPEQ QYGDEEDEDD LEESSDSDEE SEYDQLPPFK SLTKAQMATL SKSQKKQYLD EMEYREKLLM KKQMKEERKR
0901: RKMFKKFAAE IKDLPDGYSE NVEEESGGPA SVPVPMPDLS LPASFDSDNP THRYRYLDSS NQWLVRPVLE THGWDHDIGY EGVNAERLFV VKEKIPISVS
1001: GQVTKDKKDA NVQLEMASSV KHGEGKSTSL GFDMQTVGKE LAYTLRSETR FNNFRRNKAA AGLSVTHLGD SVSAGLKVED KFIASKWFRI VMSGGAMTSR
1101: GDFAYGGTLE AQLRDKDYPL GRFLTTLGLS VMDWHGDLAI GGNIQSQVPI GRSSNLIARA NLNNRGAGQV SVRVNSSEQL QLAMVAIVPL FKKLLSYYYP
1201: QTQYGQ
Arabidopsis Description
TOC132Translocase of chloroplast 132, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SLF3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.