Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d004430_P001 | |
| Zm00001d028586_P001 | |
| Zm00001d032615_P002 | |
| Zm00001d047828_P001 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER91974 | Sorghum | cytosol | 87.0 | 89.99 |
| Zm00001d029846_P001 | Maize | plastid | 87.1 | 89.37 |
| HORVU1Hr1G053280.1 | Barley | mitochondrion | 57.97 | 85.08 |
| Os10t0548800-01 | Rice | cytosol, plasma membrane, plastid | 72.43 | 73.51 |
| TraesCS1B01G222000.1 | Wheat | cytosol | 69.79 | 66.48 |
| TraesCS1A01G208000.1 | Wheat | cytosol | 69.4 | 66.48 |
| TraesCS1D01G211300.1 | Wheat | cytosol, golgi | 69.6 | 66.29 |
| CDX70657 | Canola | cytosol | 15.84 | 55.86 |
| CDX70659 | Canola | cytosol | 5.47 | 51.85 |
| CDY66172 | Canola | cytosol | 48.88 | 50.71 |
| CDX70551 | Canola | cytosol | 17.4 | 49.44 |
| PGSC0003DMT400024781 | Potato | cytosol | 50.93 | 49.2 |
| CDX78660 | Canola | cytosol | 31.28 | 48.27 |
| Bra006330.1-P | Field mustard | cytosol | 31.18 | 48.11 |
| AT3G16620.1 | Thale cress | cytosol | 50.15 | 47.11 |
| CDY43117 | Canola | cytosol | 49.17 | 45.56 |
| Solyc11g043010.1.1 | Tomato | nucleus | 32.36 | 45.47 |
| KRH24252 | Soybean | mitochondrion | 53.57 | 45.25 |
| Bra022170.1-P | Field mustard | nucleus | 46.43 | 44.68 |
| CDX92086 | Canola | cytosol, endoplasmic reticulum, vacuole | 46.33 | 44.59 |
| AT2G16640.3 | Thale cress | cytosol | 51.91 | 44.03 |
| CDX70550 | Canola | cytosol | 12.02 | 43.46 |
| VIT_03s0038g02070.t01 | Wine grape | nucleus | 54.15 | 43.45 |
| CDX70641 | Canola | cytosol | 33.63 | 42.89 |
| CDX92087 | Canola | cytosol | 49.27 | 42.64 |
| GSMUA_Achr8P19440_001 | Banana | cytosol | 48.09 | 40.97 |
| KRH29257 | Soybean | endoplasmic reticulum | 53.86 | 40.31 |
| PGSC0003DMT400004034 | Potato | cytosol | 52.3 | 39.11 |
| Solyc01g111240.2.1 | Tomato | nucleus | 51.12 | 39.0 |
| Zm00001d035254_P001 | Maize | plastid | 28.54 | 37.24 |
| GSMUA_Achr11P... | Banana | cytosol | 50.54 | 36.67 |
| CDX70658 | Canola | cytosol | 4.4 | 35.16 |
| Zm00001d010852_P002 | Maize | plastid | 39.69 | 33.64 |
| Zm00001d035812_P003 | Maize | plastid | 39.78 | 31.28 |
| Zm00001d028373_P002 | Maize | cytosol | 9.29 | 28.44 |
| Zm00001d012893_P002 | Maize | cytosol, plastid | 30.6 | 27.5 |
| Zm00001d047965_P002 | Maize | cytosol | 9.19 | 26.55 |
| Zm00001d034755_P001 | Maize | cytosol | 29.81 | 26.43 |
Protein Annotations
| EntrezGene:103638962 | MapMan:23.1.2.2 | Gene3D:3.40.50.300 | ProteinID:AQL05667.1 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 | GO:GO:0016817 | InterPro:G_AIG1 |
| InterPro:IPR006703 | UniProt:K7VKG7 | InterPro:P-loop_NTPase | PFAM:PF04548 | PFAM:PF11886 | PFscan:PS51720 |
| PANTHER:PTHR10903 | PANTHER:PTHR10903:SF47 | SUPFAM:SSF52540 | TIGRFAMs:TIGR00993 | InterPro:TOC159_MAD | InterPro:Toc86_159 |
| UniParc:UPI000220A84D | EnsemblPlantsGene:Zm00001d047130 | EnsemblPlants:Zm00001d047130_P001 | EnsemblPlants:Zm00001d047130_T001 | SEG:seg | : |
Description
Translocase of chloroplast 120 chloroplastic
Coordinates
chr9:+:119474567..119477638
Molecular Weight (calculated)
110828.0 Da
IEP (calculated)
4.903
GRAVY (calculated)
-0.474
Length
1023 amino acids
Sequence
(BLAST)
(BLAST)
0001: MENGGGVREG RPEHRAGENG GVAAEEESVL KAATLAGEGN CVVAVEVWDE GDVPLGQDGG GDEAGEENRG PGEGAVESAV VTGDHQPLVT PNTRVAGQRG
0101: AEKWDEDDTP SFVDVEESFA DDVNQDHVNE NVMGQSFREY MVTSVLADRE KERLDNDHNF FSNPGDKAEV AAHSGSEYED VKGGTLAHQS KNHPGKSTEE
0201: IASSHSRPEL VTNSAAEPAV VIEELDDSSS SDDENTATSA PPAQSSSGSS TSAQPSSAAS ARSTNGPSLI SRPAGLGSSS SLSQPPARSV QQVRASRPAA
0301: VDKGTQEATE SAEDDRDEND DIHEKLQMIR VKFLRLAGRL GQTSHNMVVS QVLYRLGLAE QLRRTANGTF SIDRAREMAE RLEAAGNEPL DFSCTILVLG
0401: KTGVGKSATI NSIFDDIRLD TNAFDSSTMK VQVVGTVEGI KVKVIDTPGL SCSSFEQHHN QKVLNSVKRL ISRNPPDIVL YFDRLDMQSR DNGDVPLLQT
0501: ITKVFGASVW FNAIVVLTHA ASAPPDGQNG IPLSYEMFVT QRSHVVQQAI RQAAGDGRLM NPVSLVENHS ACRTNRAGQR VLPNGQVWKP QLLLLCFASK
0601: VLAEANVLLK LQDSPIGKLS HTRIPPLPFL LSSLLQSRAP LKLPEEQFGG DDDDLEDDLA DDSDSDDGSD CDDLPPFKRL TKAQLAKLNN EQRKAYLEEL
0701: DYREKLFYRK QLKEESKHRK LMKKMAAEAS ARGTDFSNSN LEDDSNTPTN VSVPMPDMVL PSSFDSDYPT HRYRFLDTPS EWLIRPVLET QGWDHDVGYE
0801: GLNVERLFAV KGKVPLSVSG QLTKDKKDCS LQMEVASSIK HAEGKTTSFG LDLQSVGKDM AYTIRGESRF KNFRRNNTAA GISATLLGDS VSAGLKIEDK
0901: LIVNKQLRVL VSSGAMSGRG DVAYGGRLEA IRDKNYPIGR LLSTIALSVV DWHGDLAIGC NIQSQIPAGR ASNLVGHANL SNKGTGQVGI RLNSSEHLEI
1001: ALVALVPIFQ NIMKLLQNYL ESG
0101: AEKWDEDDTP SFVDVEESFA DDVNQDHVNE NVMGQSFREY MVTSVLADRE KERLDNDHNF FSNPGDKAEV AAHSGSEYED VKGGTLAHQS KNHPGKSTEE
0201: IASSHSRPEL VTNSAAEPAV VIEELDDSSS SDDENTATSA PPAQSSSGSS TSAQPSSAAS ARSTNGPSLI SRPAGLGSSS SLSQPPARSV QQVRASRPAA
0301: VDKGTQEATE SAEDDRDEND DIHEKLQMIR VKFLRLAGRL GQTSHNMVVS QVLYRLGLAE QLRRTANGTF SIDRAREMAE RLEAAGNEPL DFSCTILVLG
0401: KTGVGKSATI NSIFDDIRLD TNAFDSSTMK VQVVGTVEGI KVKVIDTPGL SCSSFEQHHN QKVLNSVKRL ISRNPPDIVL YFDRLDMQSR DNGDVPLLQT
0501: ITKVFGASVW FNAIVVLTHA ASAPPDGQNG IPLSYEMFVT QRSHVVQQAI RQAAGDGRLM NPVSLVENHS ACRTNRAGQR VLPNGQVWKP QLLLLCFASK
0601: VLAEANVLLK LQDSPIGKLS HTRIPPLPFL LSSLLQSRAP LKLPEEQFGG DDDDLEDDLA DDSDSDDGSD CDDLPPFKRL TKAQLAKLNN EQRKAYLEEL
0701: DYREKLFYRK QLKEESKHRK LMKKMAAEAS ARGTDFSNSN LEDDSNTPTN VSVPMPDMVL PSSFDSDYPT HRYRFLDTPS EWLIRPVLET QGWDHDVGYE
0801: GLNVERLFAV KGKVPLSVSG QLTKDKKDCS LQMEVASSIK HAEGKTTSFG LDLQSVGKDM AYTIRGESRF KNFRRNNTAA GISATLLGDS VSAGLKIEDK
0901: LIVNKQLRVL VSSGAMSGRG DVAYGGRLEA IRDKNYPIGR LLSTIALSVV DWHGDLAIGC NIQSQIPAGR ASNLVGHANL SNKGTGQVGI RLNSSEHLEI
1001: ALVALVPIFQ NIMKLLQNYL ESG
0001: MGDGAEIVTR LYGDEKKLAE DGRISELVGS DEVKDNEEEV FEEAIGSQEG LKPESLKTDV LQEDFPLASN DEVCDLEETS RNERGVENLK VNYSEIGESH
0101: GEVNEQCITT KEADSDLVTL KMNDYDHGEV ADADISYGKM ASSLDVVENS EKATSNLATE DVNLENGNTH SSSENGVVSP DENKELVAEV ISVSACSVET
0201: GSNGIDDEKW EEEIDVSAGM VTEQRNGKTG AEFNSVKIVS GDKSLNDSIE VAAGTLSPLE KSSSEEKGET ESQNSNGGHD IQSNKEIVKQ QDSSVNIGPE
0301: IKESQHMERE SEVLSSVSPT ESRSDTAALP PARPAGLGRA APLLEPAPRV TQQPRVNGNV SHNQPQQAED STTAETDEHD ETREKLQFIR VKFLRLSHRL
0401: GQTPHNVVVA QVLYRLGLAE QLRGRNGSRV GAFSFDRASA MAEQLEAAAQ DPLDFSCTIM VLGKSGVGKS ATINSIFDEL KISTDAFQVG TKKVQDIEGF
0501: VQGIKVRVID TPGLLPSWSD QHKNEKILKS VRAFIKKSPP DIVLYLDRLD MQSRDSGDMP LLRTITDVFG PSIWFNAIVG LTHAASAPPD GPNGTASSYD
0601: MFVTQRSHVI QQAIRQAAGD MRLMNPVSLV ENHSACRTNR AGQRVLPNGQ VWKPHLLLLS FASKILAEAN ALLKLQDNIP GGQFATRSKA PPLPLLLSSL
0701: LQSRPQAKLP EQQYDDEDDE DDLDESSDSE EESEYDELPP FKRLTKAEMT KLSKSQKKEY LDEMEYREKL FMKRQMKEER KRRKLLKKFA AEIKDMPNGY
0801: SENVEEERSE PASVPVPMPD LSLPASFDSD NPTHRYRYLD TSNQWLVRPV LETHGWDHDI GYEGVNAERL FVVKDKIPVS FSGQVTKDKK DAHVQLELAS
0901: SVKHGEGRST SLGFDMQNAG KELAYTIRSE TRFNKFRKNK AAAGLSVTLL GDSVSAGLKV EDKLIANKRF RMVMSGGAMT SRGDVAYGGT LEAQFRDKDY
1001: PLGRFLSTLG LSVMDWHGDL AIGGNIQSQV PIGRSSNLIA RANLNNRGAG QVSIRVNSSE QLQLAVVALV PLFKKLLTYY SPEQMQYGH
0101: GEVNEQCITT KEADSDLVTL KMNDYDHGEV ADADISYGKM ASSLDVVENS EKATSNLATE DVNLENGNTH SSSENGVVSP DENKELVAEV ISVSACSVET
0201: GSNGIDDEKW EEEIDVSAGM VTEQRNGKTG AEFNSVKIVS GDKSLNDSIE VAAGTLSPLE KSSSEEKGET ESQNSNGGHD IQSNKEIVKQ QDSSVNIGPE
0301: IKESQHMERE SEVLSSVSPT ESRSDTAALP PARPAGLGRA APLLEPAPRV TQQPRVNGNV SHNQPQQAED STTAETDEHD ETREKLQFIR VKFLRLSHRL
0401: GQTPHNVVVA QVLYRLGLAE QLRGRNGSRV GAFSFDRASA MAEQLEAAAQ DPLDFSCTIM VLGKSGVGKS ATINSIFDEL KISTDAFQVG TKKVQDIEGF
0501: VQGIKVRVID TPGLLPSWSD QHKNEKILKS VRAFIKKSPP DIVLYLDRLD MQSRDSGDMP LLRTITDVFG PSIWFNAIVG LTHAASAPPD GPNGTASSYD
0601: MFVTQRSHVI QQAIRQAAGD MRLMNPVSLV ENHSACRTNR AGQRVLPNGQ VWKPHLLLLS FASKILAEAN ALLKLQDNIP GGQFATRSKA PPLPLLLSSL
0701: LQSRPQAKLP EQQYDDEDDE DDLDESSDSE EESEYDELPP FKRLTKAEMT KLSKSQKKEY LDEMEYREKL FMKRQMKEER KRRKLLKKFA AEIKDMPNGY
0801: SENVEEERSE PASVPVPMPD LSLPASFDSD NPTHRYRYLD TSNQWLVRPV LETHGWDHDI GYEGVNAERL FVVKDKIPVS FSGQVTKDKK DAHVQLELAS
0901: SVKHGEGRST SLGFDMQNAG KELAYTIRSE TRFNKFRKNK AAAGLSVTLL GDSVSAGLKV EDKLIANKRF RMVMSGGAMT SRGDVAYGGT LEAQFRDKDY
1001: PLGRFLSTLG LSVMDWHGDL AIGGNIQSQV PIGRSSNLIA RANLNNRGAG QVSIRVNSSE QLQLAVVALV PLFKKLLTYY SPEQMQYGH
Arabidopsis Description
TOC120Translocase of chloroplast 120, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LUS2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.