Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY43117 | Canola | cytosol | 98.48 | 87.95 |
| CDX92086 | Canola | cytosol, endoplasmic reticulum, vacuole | 90.87 | 84.29 |
| CDX92087 | Canola | cytosol | 93.1 | 77.67 |
| AT3G16620.1 | Thale cress | cytosol | 82.15 | 74.38 |
| CDX70657 | Canola | cytosol | 20.89 | 71.03 |
| CDX70659 | Canola | cytosol | 7.61 | 69.44 |
| CDX97269 | Canola | cytosol | 4.46 | 66.67 |
| HORVU1Hr1G053280.1 | Barley | mitochondrion | 46.55 | 65.85 |
| CDX78660 | Canola | cytosol | 43.71 | 65.01 |
| CDX70551 | Canola | cytosol | 23.02 | 63.06 |
| CDX70550 | Canola | cytosol | 18.05 | 62.9 |
| CDX70641 | Canola | cytosol | 47.06 | 57.86 |
| PGSC0003DMT400024781 | Potato | cytosol | 61.36 | 57.13 |
| Solyc11g043010.1.1 | Tomato | nucleus | 39.66 | 53.71 |
| KRH24252 | Soybean | mitochondrion | 63.89 | 52.02 |
| EER91974 | Sorghum | cytosol | 51.42 | 51.26 |
| Os10t0548800-01 | Rice | cytosol, plasma membrane, plastid | 52.23 | 51.09 |
| Zm00001d029846_P001 | Maize | plastid | 50.81 | 50.25 |
| VIT_03s0038g02070.t01 | Wine grape | nucleus | 63.89 | 49.41 |
| Zm00001d047130_P001 | Maize | cytosol | 50.71 | 48.88 |
| CDX70658 | Canola | cytosol | 6.29 | 48.44 |
| TraesCS1B01G222000.1 | Wheat | cytosol | 51.32 | 47.11 |
| TraesCS1A01G208000.1 | Wheat | cytosol | 50.41 | 46.54 |
| TraesCS1D01G211300.1 | Wheat | cytosol, golgi | 50.61 | 46.46 |
| CDY50376 | Canola | cytosol | 32.76 | 46.34 |
| KRH29257 | Soybean | endoplasmic reticulum | 63.69 | 45.94 |
| PGSC0003DMT400004034 | Potato | cytosol | 62.68 | 45.18 |
| Solyc01g111240.2.1 | Tomato | nucleus | 61.26 | 45.04 |
| CDX97270 | Canola | cytosol | 18.36 | 41.23 |
| GSMUA_Achr8P19440_001 | Banana | cytosol | 48.68 | 39.97 |
| CDX91288 | Canola | cytosol | 29.82 | 37.4 |
| CDY35813 | Canola | cytosol | 28.4 | 35.76 |
| CDX92471 | Canola | cytosol | 28.4 | 35.76 |
| GSMUA_Achr11P... | Banana | cytosol | 49.7 | 34.75 |
| CDY52130 | Canola | cytosol, plastid | 9.23 | 29.07 |
| CDX98810 | Canola | cytosol | 9.13 | 28.75 |
| CDX80936 | Canola | cytosol | 9.13 | 28.75 |
| CDX89987 | Canola | cytosol | 8.62 | 28.52 |
| CDY55323 | Canola | cytosol | 8.52 | 28.28 |
| CDY32453 | Canola | cytosol | 8.52 | 28.28 |
| CDY15228 | Canola | cytosol | 8.52 | 28.19 |
| CDX70178 | Canola | cytosol | 10.95 | 14.23 |
| CDY44175 | Canola | cytosol | 12.37 | 13.2 |
| CDY22896 | Canola | cytosol | 12.17 | 11.85 |
| CDX98809 | Canola | cytosol | 2.03 | 4.44 |
Protein Annotations
| MapMan:23.1.2.2 | Gene3D:3.40.50.300 | GO:A0A078JLA8 | UniProt:A0A078JLA8 | EnsemblPlants:CDY66172 | ProteinID:CDY66172 |
| ProteinID:CDY66172.1 | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005525 | GO:GO:0016787 | GO:GO:0016817 | EnsemblPlantsGene:GSBRNA2T00052215001 | InterPro:G_AIG1 | InterPro:IPR006703 |
| InterPro:P-loop_NTPase | PFAM:PF04548 | PFAM:PF11886 | PFscan:PS51720 | PANTHER:PTHR10903 | PANTHER:PTHR10903:SF47 |
| SUPFAM:SSF52540 | TIGRFAMs:TIGR00993 | InterPro:TOC159_MAD | InterPro:Toc86_159 | UniParc:UPI0004EE420E | SEG:seg |
Description
BnaUnng01340DBnaUnng01340D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JLA8]
Coordinates
chrLK035118:-:13835..17478
Molecular Weight (calculated)
108636.0 Da
IEP (calculated)
5.260
GRAVY (calculated)
-0.663
Length
986 amino acids
Sequence
(BLAST)
(BLAST)
001: MEEQKLAADR EAIDSSKRES LQPDDLPSEE VKDSKVNGES HGEANLQHST TGEAATGFVT SQMNGDEGEA GAENVNETST LSFSENGTVF PEKKQVVAEV
101: IEETTNDGIE EENKEETVDV SGAQRNGERA SGERSFSDSI QVASAGTPSP SEKSSSEENG ETEGRISREH DTVQNGGLGV EHTSQPNKDF EKQQGSSVNI
201: SPEVKERKFE VASSVSPTES TCNTAASPPA RPAGLGRDAP LLEPTPRVPH QPRANGNESQ NQSQQAEDPT TAETDEHDET REKLQLIRVK FLRLSHRLGQ
301: TPHNVVVAQV LYRLGLAEQL RGRNGSRVGA FSFDRASSMA EQLEAAGQDP LDFSCTVMVL GKSGVGKSAT INSIFDEVKI CTDAFQMGTK RVQEVEGFVQ
401: GIKVRVIDTP GLLPSWSDQH KNEKMLKSVK AFIKKNPPDI VLYLDRLDMQ SRDSGDTPLL RTITDVFGPS IWFNAIVGLT HAASAPPDGP NGTASSYDMF
501: VTQRSHVIQQ AIRQAAGDMR LMNPVSLVEN HSACRTNRAG QRVLPNGQVW KPHLLLLSFA SKILAEANAL LKLQDNNTPG RPFVARSKAP PLPLLLSSFL
601: QSRPQAKLPE EQYGDEEDED DLDESSGSDE ESEYDQLPPF KRLTKSEMAR LSKSQKKQYL DEMEYREKLF MKRQMKEERK RRKMMKKFAA EIKDMAEEHS
701: ENVEEERSEP ASVPVPMPDL SLPASFDSDN PTHRYRSLDS SNQWLVRPVL ETQGWDHDVG YEGVNAERLF VVKEKIPISF SGQVTKDKKD ANVQLEMAGS
801: VKHGEGRSTS LGFEMQNAGK ELAYTVRSDT RFNNFRKHKA AAGLSVTLLG DSVSAGLKVE DKLIANKRFR MVMCGGAMTS RGDVAYGGSL EAQLRDKDYP
901: LGRFLSTLGL SLMDWHGDLA IGGNIQSQVP IGRSSNLIAR ANLNNRGTGQ VSVRVNSSEQ LQLAMVALVP LFKKLFSYYS PQQMQY
101: IEETTNDGIE EENKEETVDV SGAQRNGERA SGERSFSDSI QVASAGTPSP SEKSSSEENG ETEGRISREH DTVQNGGLGV EHTSQPNKDF EKQQGSSVNI
201: SPEVKERKFE VASSVSPTES TCNTAASPPA RPAGLGRDAP LLEPTPRVPH QPRANGNESQ NQSQQAEDPT TAETDEHDET REKLQLIRVK FLRLSHRLGQ
301: TPHNVVVAQV LYRLGLAEQL RGRNGSRVGA FSFDRASSMA EQLEAAGQDP LDFSCTVMVL GKSGVGKSAT INSIFDEVKI CTDAFQMGTK RVQEVEGFVQ
401: GIKVRVIDTP GLLPSWSDQH KNEKMLKSVK AFIKKNPPDI VLYLDRLDMQ SRDSGDTPLL RTITDVFGPS IWFNAIVGLT HAASAPPDGP NGTASSYDMF
501: VTQRSHVIQQ AIRQAAGDMR LMNPVSLVEN HSACRTNRAG QRVLPNGQVW KPHLLLLSFA SKILAEANAL LKLQDNNTPG RPFVARSKAP PLPLLLSSFL
601: QSRPQAKLPE EQYGDEEDED DLDESSGSDE ESEYDQLPPF KRLTKSEMAR LSKSQKKQYL DEMEYREKLF MKRQMKEERK RRKMMKKFAA EIKDMAEEHS
701: ENVEEERSEP ASVPVPMPDL SLPASFDSDN PTHRYRSLDS SNQWLVRPVL ETQGWDHDVG YEGVNAERLF VVKEKIPISF SGQVTKDKKD ANVQLEMAGS
801: VKHGEGRSTS LGFEMQNAGK ELAYTVRSDT RFNNFRKHKA AAGLSVTLLG DSVSAGLKVE DKLIANKRFR MVMCGGAMTS RGDVAYGGSL EAQLRDKDYP
901: LGRFLSTLGL SLMDWHGDLA IGGNIQSQVP IGRSSNLIAR ANLNNRGTGQ VSVRVNSSEQ LQLAMVALVP LFKKLFSYYS PQQMQY
0001: MGDGAEIVTR LYGDEKKLAE DGRISELVGS DEVKDNEEEV FEEAIGSQEG LKPESLKTDV LQEDFPLASN DEVCDLEETS RNERGVENLK VNYSEIGESH
0101: GEVNEQCITT KEADSDLVTL KMNDYDHGEV ADADISYGKM ASSLDVVENS EKATSNLATE DVNLENGNTH SSSENGVVSP DENKELVAEV ISVSACSVET
0201: GSNGIDDEKW EEEIDVSAGM VTEQRNGKTG AEFNSVKIVS GDKSLNDSIE VAAGTLSPLE KSSSEEKGET ESQNSNGGHD IQSNKEIVKQ QDSSVNIGPE
0301: IKESQHMERE SEVLSSVSPT ESRSDTAALP PARPAGLGRA APLLEPAPRV TQQPRVNGNV SHNQPQQAED STTAETDEHD ETREKLQFIR VKFLRLSHRL
0401: GQTPHNVVVA QVLYRLGLAE QLRGRNGSRV GAFSFDRASA MAEQLEAAAQ DPLDFSCTIM VLGKSGVGKS ATINSIFDEL KISTDAFQVG TKKVQDIEGF
0501: VQGIKVRVID TPGLLPSWSD QHKNEKILKS VRAFIKKSPP DIVLYLDRLD MQSRDSGDMP LLRTITDVFG PSIWFNAIVG LTHAASAPPD GPNGTASSYD
0601: MFVTQRSHVI QQAIRQAAGD MRLMNPVSLV ENHSACRTNR AGQRVLPNGQ VWKPHLLLLS FASKILAEAN ALLKLQDNIP GGQFATRSKA PPLPLLLSSL
0701: LQSRPQAKLP EQQYDDEDDE DDLDESSDSE EESEYDELPP FKRLTKAEMT KLSKSQKKEY LDEMEYREKL FMKRQMKEER KRRKLLKKFA AEIKDMPNGY
0801: SENVEEERSE PASVPVPMPD LSLPASFDSD NPTHRYRYLD TSNQWLVRPV LETHGWDHDI GYEGVNAERL FVVKDKIPVS FSGQVTKDKK DAHVQLELAS
0901: SVKHGEGRST SLGFDMQNAG KELAYTIRSE TRFNKFRKNK AAAGLSVTLL GDSVSAGLKV EDKLIANKRF RMVMSGGAMT SRGDVAYGGT LEAQFRDKDY
1001: PLGRFLSTLG LSVMDWHGDL AIGGNIQSQV PIGRSSNLIA RANLNNRGAG QVSIRVNSSE QLQLAVVALV PLFKKLLTYY SPEQMQYGH
0101: GEVNEQCITT KEADSDLVTL KMNDYDHGEV ADADISYGKM ASSLDVVENS EKATSNLATE DVNLENGNTH SSSENGVVSP DENKELVAEV ISVSACSVET
0201: GSNGIDDEKW EEEIDVSAGM VTEQRNGKTG AEFNSVKIVS GDKSLNDSIE VAAGTLSPLE KSSSEEKGET ESQNSNGGHD IQSNKEIVKQ QDSSVNIGPE
0301: IKESQHMERE SEVLSSVSPT ESRSDTAALP PARPAGLGRA APLLEPAPRV TQQPRVNGNV SHNQPQQAED STTAETDEHD ETREKLQFIR VKFLRLSHRL
0401: GQTPHNVVVA QVLYRLGLAE QLRGRNGSRV GAFSFDRASA MAEQLEAAAQ DPLDFSCTIM VLGKSGVGKS ATINSIFDEL KISTDAFQVG TKKVQDIEGF
0501: VQGIKVRVID TPGLLPSWSD QHKNEKILKS VRAFIKKSPP DIVLYLDRLD MQSRDSGDMP LLRTITDVFG PSIWFNAIVG LTHAASAPPD GPNGTASSYD
0601: MFVTQRSHVI QQAIRQAAGD MRLMNPVSLV ENHSACRTNR AGQRVLPNGQ VWKPHLLLLS FASKILAEAN ALLKLQDNIP GGQFATRSKA PPLPLLLSSL
0701: LQSRPQAKLP EQQYDDEDDE DDLDESSDSE EESEYDELPP FKRLTKAEMT KLSKSQKKEY LDEMEYREKL FMKRQMKEER KRRKLLKKFA AEIKDMPNGY
0801: SENVEEERSE PASVPVPMPD LSLPASFDSD NPTHRYRYLD TSNQWLVRPV LETHGWDHDI GYEGVNAERL FVVKDKIPVS FSGQVTKDKK DAHVQLELAS
0901: SVKHGEGRST SLGFDMQNAG KELAYTIRSE TRFNKFRKNK AAAGLSVTLL GDSVSAGLKV EDKLIANKRF RMVMSGGAMT SRGDVAYGGT LEAQFRDKDY
1001: PLGRFLSTLG LSVMDWHGDL AIGGNIQSQV PIGRSSNLIA RANLNNRGAG QVSIRVNSSE QLQLAVVALV PLFKKLLTYY SPEQMQYGH
Arabidopsis Description
TOC120Translocase of chloroplast 120, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LUS2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.