Subcellular Localization
min:
: max
Winner_takes_all: golgi, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
golgi:
25769308
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1A01G208000.1 | Wheat | cytosol | 96.55 | 97.1 |
| HORVU1Hr1G053280.1 | Barley | mitochondrion | 62.94 | 96.99 |
| TraesCS1B01G222000.1 | Wheat | cytosol | 96.93 | 96.93 |
| Os10t0548800-01 | Rice | cytosol, plasma membrane, plastid | 71.04 | 75.69 |
| EER91974 | Sorghum | cytosol | 67.5 | 73.31 |
| Zm00001d029846_P001 | Maize | plastid | 67.69 | 72.92 |
| Zm00001d047130_P001 | Maize | cytosol | 66.29 | 69.6 |
| CDX70657 | Canola | cytosol | 15.08 | 55.86 |
| CDX70659 | Canola | cytosol | 5.12 | 50.93 |
| CDY66172 | Canola | cytosol | 46.46 | 50.61 |
| CDX70551 | Canola | cytosol | 16.48 | 49.17 |
| PGSC0003DMT400024781 | Potato | cytosol | 48.42 | 49.1 |
| Bra006330.1-P | Field mustard | cytosol | 29.61 | 47.96 |
| CDX78660 | Canola | cytosol | 29.42 | 47.66 |
| AT3G16620.1 | Thale cress | cytosol | 47.3 | 46.65 |
| Solyc11g043010.1.1 | Tomato | nucleus | 30.73 | 45.33 |
| CDY43117 | Canola | cytosol | 46.46 | 45.2 |
| Bra022170.1-P | Field mustard | nucleus | 44.13 | 44.59 |
| CDX92086 | Canola | cytosol, endoplasmic reticulum, vacuole | 44.13 | 44.59 |
| KRH24252 | Soybean | mitochondrion | 49.81 | 44.18 |
| AT2G16640.3 | Thale cress | cytosol | 48.88 | 43.53 |
| VIT_03s0038g02070.t01 | Wine grape | nucleus | 50.74 | 42.75 |
| CDX70550 | Canola | cytosol | 11.17 | 42.4 |
| CDX70641 | Canola | cytosol | 31.66 | 42.39 |
| CDX92087 | Canola | cytosol | 46.55 | 42.3 |
| GSMUA_Achr8P19440_001 | Banana | cytosol | 45.16 | 40.38 |
| PGSC0003DMT400004034 | Potato | cytosol | 50.65 | 39.77 |
| Solyc01g111240.2.1 | Tomato | nucleus | 49.44 | 39.6 |
| KRH29257 | Soybean | endoplasmic reticulum | 50.19 | 39.43 |
| CDX70658 | Canola | cytosol | 4.38 | 36.72 |
| TraesCS5D01G120200.1 | Wheat | mitochondrion | 26.72 | 36.56 |
| GSMUA_Achr11P... | Banana | cytosol | 47.86 | 36.45 |
| TraesCS1D01G102500.3 | Wheat | cytosol, nucleus, plastid | 39.57 | 29.82 |
| TraesCS4D01G230000.1 | Wheat | cytosol | 8.1 | 26.69 |
| TraesCS5D01G514500.1 | Wheat | cytosol, plastid | 29.8 | 26.47 |
Protein Annotations
| MapMan:23.1.2.2 | Gene3D:3.40.50.300 | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 | GO:GO:0016817 | InterPro:G_AIG1 | InterPro:IPR006703 |
| InterPro:P-loop_NTPase | PFAM:PF04548 | PFAM:PF11886 | PFscan:PS51720 | PANTHER:PTHR10903 | PANTHER:PTHR10903:SF47 |
| SUPFAM:SSF52540 | TIGRFAMs:TIGR00993 | InterPro:TOC159_MAD | InterPro:Toc86_159 | EnsemblPlantsGene:TraesCS1D01G211300 | EnsemblPlants:TraesCS1D01G211300.1 |
| TIGR:cd01853 | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chr1D:+:297163042..297166266
Molecular Weight (calculated)
116567.0 Da
IEP (calculated)
4.405
GRAVY (calculated)
-0.474
Length
1074 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDDSAIGEKR LLETEDRESP GGVAEEEVGG AQVGAEPAPD AAAAEVGGSG EILDAREGDA AEGVVQAQEG GGGEVVEVRQ RDVGVEEVVS DVAWAEATMD
0101: PSVSYDQQAA WNGVAQRNGP PTAVESDEDA DLFVEVEQQE LAGSDQSEEF FHNAQASVTG ESVAAECEAI EDYRPAEIGV EDDAHDEHRE RLEEEAMLEA
0201: IRQCVTDAVL AEHLDEEPEK GREDVPACDS NPELPMNSSE PEQVQEAMLV DQSKEQPEYS KGDTAARDSK LVVPTQSGGE PDVVVEELDD SNSSDDENKA
0301: SSAPARSSSA AAGQANGPSL LSRPAGLGSS SSLLPPARPV QQVRANGPVA VDRDARQDTE SAADDGDEND EIREKLQMIR VKFLRLANRF GQTPHNMVVS
0401: QVLYRLGLAE QIRRNGRGVF NFDRAQEMAE RLEAAGNEPL DLSCTILVLG KTGVGKSATI NSIFDDVELE TDAFEASTRK VQEVVGMVEG IKVKVIDTPG
0501: LSSSSSDQHY NQKVLNSVKK LVSKNPPDIV LYFDRLDLQS RDYGDVPLLQ TISKVFGASV WFNAIVVLTH AASAPPDGPN GIPLSYEMFV TQRSHVVQQA
0601: IRQAAADVRL MNPVALVENH SACRANRSGQ RVLPNGQVWK PQLLLLCFAS KVLAEANSFL KLQDSPAGKT SSTRVAPLPF LLSSLLQSRA PLKLPEEQFG
0701: DDDDLEDDLA DDYGSDDGSD YDDLPPFKRL TKAQLSKLNH AQRKAYLEEL DYREKLFYKK QLKEEHMRRK MMKKMAAEAR AREDDFGNNS VDDDGSTPTN
0801: VAVPMPDMVL PSTFDSDYPS HRYRFLDTPS EWLVRPVLET QGWDHDVGYE GLNVERLFAV KGKVPLSVSG QLTKDKKDSS LQMEVASSVK HGEGKTSSVG
0901: LDLQSVGKDM AYTIRGESRF KNFKRNNTAA GISATLLGDT LSAGVKIEDR LIVNKQLRLL VSGGTMSGKG DAAYGGRLEA TLRDKDYPIG RMLSTLAISV
1001: VDWHGDLAVG CNAQSQIPAG RSSNLIASLN VSNKGTGQVG IRLNSSEHLQ IALLALVPIF KNVRKLLDSY YESV
0101: PSVSYDQQAA WNGVAQRNGP PTAVESDEDA DLFVEVEQQE LAGSDQSEEF FHNAQASVTG ESVAAECEAI EDYRPAEIGV EDDAHDEHRE RLEEEAMLEA
0201: IRQCVTDAVL AEHLDEEPEK GREDVPACDS NPELPMNSSE PEQVQEAMLV DQSKEQPEYS KGDTAARDSK LVVPTQSGGE PDVVVEELDD SNSSDDENKA
0301: SSAPARSSSA AAGQANGPSL LSRPAGLGSS SSLLPPARPV QQVRANGPVA VDRDARQDTE SAADDGDEND EIREKLQMIR VKFLRLANRF GQTPHNMVVS
0401: QVLYRLGLAE QIRRNGRGVF NFDRAQEMAE RLEAAGNEPL DLSCTILVLG KTGVGKSATI NSIFDDVELE TDAFEASTRK VQEVVGMVEG IKVKVIDTPG
0501: LSSSSSDQHY NQKVLNSVKK LVSKNPPDIV LYFDRLDLQS RDYGDVPLLQ TISKVFGASV WFNAIVVLTH AASAPPDGPN GIPLSYEMFV TQRSHVVQQA
0601: IRQAAADVRL MNPVALVENH SACRANRSGQ RVLPNGQVWK PQLLLLCFAS KVLAEANSFL KLQDSPAGKT SSTRVAPLPF LLSSLLQSRA PLKLPEEQFG
0701: DDDDLEDDLA DDYGSDDGSD YDDLPPFKRL TKAQLSKLNH AQRKAYLEEL DYREKLFYKK QLKEEHMRRK MMKKMAAEAR AREDDFGNNS VDDDGSTPTN
0801: VAVPMPDMVL PSTFDSDYPS HRYRFLDTPS EWLVRPVLET QGWDHDVGYE GLNVERLFAV KGKVPLSVSG QLTKDKKDSS LQMEVASSVK HGEGKTSSVG
0901: LDLQSVGKDM AYTIRGESRF KNFKRNNTAA GISATLLGDT LSAGVKIEDR LIVNKQLRLL VSGGTMSGKG DAAYGGRLEA TLRDKDYPIG RMLSTLAISV
1001: VDWHGDLAVG CNAQSQIPAG RSSNLIASLN VSNKGTGQVG IRLNSSEHLQ IALLALVPIF KNVRKLLDSY YESV
0001: MGDGTEFVVR SDREDKKLAE DRISDEQVVK NELVRSDEVR DDNEDEVFEE AIGSENDEQE EEEDPKRELF ESDDLPLVET LKSSMVEHEV EDFEEAVGDL
0101: DETSSNEGGV KDFTAVGESH GAGEAEFDVL ATKMNGDKGE GGGGGSYDKV ESSLDVVDTT ENATSTNTNG SNLAAEHVGI ENGKTHSFLG NGIASPKNKE
0201: VVAEVIPKDD GIEEPWNDGI EVDNWEERVD GIQTEQEVEE GEGTTENQFE KRTEEEVVEG EGTSKNLFEK QTEQDVVEGE GTSKDLFENG SVCMDSESEA
0301: ERNGETGAAY TSNIVTNASG DNEVSSAVTS SPLEESSSGE KGETEGDSTC LKPEQHLASS PHSYPESTEV HSNSGSPGVT SREHKPVQSA NGGHDVQSPQ
0401: PNKELEKQQS SRVHVDPEIT ENSHVETEPE VVSSVSPTES RSNPAALPPA RPAGLGRASP LLEPASRAPQ QSRVNGNGSH NQFQQAEDST TTEADEHDET
0501: REKLQLIRVK FLRLAHRLGQ TPHNVVVAQV LYRLGLAEQL RGRNGSRVGA FSFDRASAMA EQLEAAGQDP LDFSCTIMVL GKSGVGKSAT INSIFDEVKF
0601: CTDAFQMGTK RVQDVEGLVQ GIKVRVIDTP GLLPSWSDQA KNEKILNSVK AFIKKNPPDI VLYLDRLDMQ SRDSGDMPLL RTISDVFGPS IWFNAIVGLT
0701: HAASVPPDGP NGTASSYDMF VTQRSHVIQQ AIRQAAGDMR LMNPVSLVEN HSACRTNRAG QRVLPNGQVW KPHLLLLSFA SKILAEANAL LKLQDNIPGR
0801: PFAARSKAPP LPFLLSSLLQ SRPQPKLPEQ QYGDEEDEDD LEESSDSDEE SEYDQLPPFK SLTKAQMATL SKSQKKQYLD EMEYREKLLM KKQMKEERKR
0901: RKMFKKFAAE IKDLPDGYSE NVEEESGGPA SVPVPMPDLS LPASFDSDNP THRYRYLDSS NQWLVRPVLE THGWDHDIGY EGVNAERLFV VKEKIPISVS
1001: GQVTKDKKDA NVQLEMASSV KHGEGKSTSL GFDMQTVGKE LAYTLRSETR FNNFRRNKAA AGLSVTHLGD SVSAGLKVED KFIASKWFRI VMSGGAMTSR
1101: GDFAYGGTLE AQLRDKDYPL GRFLTTLGLS VMDWHGDLAI GGNIQSQVPI GRSSNLIARA NLNNRGAGQV SVRVNSSEQL QLAMVAIVPL FKKLLSYYYP
1201: QTQYGQ
0101: DETSSNEGGV KDFTAVGESH GAGEAEFDVL ATKMNGDKGE GGGGGSYDKV ESSLDVVDTT ENATSTNTNG SNLAAEHVGI ENGKTHSFLG NGIASPKNKE
0201: VVAEVIPKDD GIEEPWNDGI EVDNWEERVD GIQTEQEVEE GEGTTENQFE KRTEEEVVEG EGTSKNLFEK QTEQDVVEGE GTSKDLFENG SVCMDSESEA
0301: ERNGETGAAY TSNIVTNASG DNEVSSAVTS SPLEESSSGE KGETEGDSTC LKPEQHLASS PHSYPESTEV HSNSGSPGVT SREHKPVQSA NGGHDVQSPQ
0401: PNKELEKQQS SRVHVDPEIT ENSHVETEPE VVSSVSPTES RSNPAALPPA RPAGLGRASP LLEPASRAPQ QSRVNGNGSH NQFQQAEDST TTEADEHDET
0501: REKLQLIRVK FLRLAHRLGQ TPHNVVVAQV LYRLGLAEQL RGRNGSRVGA FSFDRASAMA EQLEAAGQDP LDFSCTIMVL GKSGVGKSAT INSIFDEVKF
0601: CTDAFQMGTK RVQDVEGLVQ GIKVRVIDTP GLLPSWSDQA KNEKILNSVK AFIKKNPPDI VLYLDRLDMQ SRDSGDMPLL RTISDVFGPS IWFNAIVGLT
0701: HAASVPPDGP NGTASSYDMF VTQRSHVIQQ AIRQAAGDMR LMNPVSLVEN HSACRTNRAG QRVLPNGQVW KPHLLLLSFA SKILAEANAL LKLQDNIPGR
0801: PFAARSKAPP LPFLLSSLLQ SRPQPKLPEQ QYGDEEDEDD LEESSDSDEE SEYDQLPPFK SLTKAQMATL SKSQKKQYLD EMEYREKLLM KKQMKEERKR
0901: RKMFKKFAAE IKDLPDGYSE NVEEESGGPA SVPVPMPDLS LPASFDSDNP THRYRYLDSS NQWLVRPVLE THGWDHDIGY EGVNAERLFV VKEKIPISVS
1001: GQVTKDKKDA NVQLEMASSV KHGEGKSTSL GFDMQTVGKE LAYTLRSETR FNNFRRNKAA AGLSVTHLGD SVSAGLKVED KFIASKWFRI VMSGGAMTSR
1101: GDFAYGGTLE AQLRDKDYPL GRFLTTLGLS VMDWHGDLAI GGNIQSQVPI GRSSNLIARA NLNNRGAGQV SVRVNSSEQL QLAMVAIVPL FKKLLSYYYP
1201: QTQYGQ
Arabidopsis Description
TOC132Translocase of chloroplast 132, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SLF3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.