Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Solyc06g076360.2.1 | |
| Solyc09g031780.2.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G16620.1 | Solyc09g031780.2.1 | AT1G06950.1 | 15829604 |
| AT3G16620.1 | Solyc06g076360.2.1 | AT3G46740.1 | 15829604 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400024781 | Potato | cytosol | 87.09 | 59.87 |
| CDX70657 | Canola | cytosol | 21.02 | 52.76 |
| CDX70551 | Canola | cytosol | 22.94 | 46.39 |
| HORVU1Hr1G053280.1 | Barley | mitochondrion | 40.52 | 42.32 |
| CDY66172 | Canola | cytosol | 53.71 | 39.66 |
| Solyc01g111240.2.1 | Tomato | nucleus | 69.92 | 37.96 |
| AT3G16620.1 | Thale cress | cytosol | 54.26 | 36.27 |
| CDY43117 | Canola | cytosol | 53.43 | 35.24 |
| VIT_03s0038g02070.t01 | Wine grape | nucleus | 60.44 | 34.51 |
| KRH24252 | Soybean | mitochondrion | 57.28 | 34.43 |
| Os10t0548800-01 | Rice | cytosol, plasma membrane, plastid | 47.25 | 34.13 |
| CDX92086 | Canola | cytosol, endoplasmic reticulum, vacuole | 49.59 | 33.96 |
| Bra022170.1-P | Field mustard | nucleus | 49.59 | 33.96 |
| CDX78660 | Canola | cytosol | 30.91 | 33.94 |
| Bra006330.1-P | Field mustard | cytosol | 30.91 | 33.94 |
| EER91974 | Sorghum | cytosol | 45.6 | 33.57 |
| Zm00001d029846_P001 | Maize | plastid | 45.74 | 33.4 |
| AT2G16640.3 | Thale cress | cytosol | 54.53 | 32.92 |
| CDX70641 | Canola | cytosol | 36.13 | 32.79 |
| CDX92087 | Canola | cytosol | 52.88 | 32.57 |
| Zm00001d047130_P001 | Maize | cytosol | 45.47 | 32.36 |
| TraesCS1B01G222000.1 | Wheat | cytosol | 45.88 | 31.1 |
| TraesCS1A01G208000.1 | Wheat | cytosol | 45.33 | 30.9 |
| TraesCS1D01G211300.1 | Wheat | cytosol, golgi | 45.33 | 30.73 |
| KRH29257 | Soybean | endoplasmic reticulum | 57.01 | 30.36 |
| Solyc07g007650.1.1 | Tomato | cytosol | 20.88 | 27.99 |
| CDX70658 | Canola | cytosol | 4.67 | 26.56 |
| GSMUA_Achr8P19440_001 | Banana | cytosol | 41.9 | 25.4 |
| Solyc03g095220.2.1 | Tomato | plastid | 8.38 | 23.55 |
| CDX70550 | Canola | cytosol | 8.79 | 22.61 |
| Solyc05g052160.2.1 | Tomato | plastid | 9.34 | 22.59 |
| GSMUA_Achr11P... | Banana | cytosol | 43.54 | 22.48 |
| Solyc01g080780.2.1 | Tomato | nucleus | 32.69 | 21.6 |
| Solyc09g074940.1.1 | Tomato | plastid | 36.68 | 19.03 |
| CDX70659 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Solyc11g043010.1.1 | EnsemblPlantsGene:Solyc11g043010.1 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005525 | InterPro:G_AIG1 | InterPro:IPR006703 | InterPro:P-loop_NTPase | InterPro:TOC159_MAD | PANTHER:PTHR10903 |
| PANTHER:PTHR10903:SF47 | PFAM:PF04548 | PFAM:PF11886 | PFscan:PS51720 | SEG:seg | SUPFAM:SSF52540 |
| UniParc:UPI000276A140 | UniProt:K4D868 | MapMan:23.1.2.2 | : | : | : |
Description
No Description!
Coordinates
chr11:+:33864577..33867212
Molecular Weight (calculated)
81304.3 Da
IEP (calculated)
5.001
GRAVY (calculated)
-0.500
Length
728 amino acids
Sequence
(BLAST)
(BLAST)
001: MELVNLKYKV QEYTEERKDV LNCDATDLQY LKEESPDVAL LKSNDKVRDY AEEQKDTIDH QVLTRKDLPA VRLGNLIDEV QLFMEQQKDD LTCDATDDQI
101: LNDKESPAVG LAISNDKVDD QKDASVFCTS ASENRTVNLS RETVTAEDEN WKSSEGSVSK NNGKVGVNTA EFVSNQSKMF TGVRETEAGS ARNLVSSSGS
201: SMTRIPPPAQ PVGLGRAAPL LEPSPQVVQQ AWVHEAASSV QNQLVEEPTN GESEEYDEIR EKLQMIRVKF LRLAHKVGQN PHNVVVAQVL YRLGLDEQMR
301: GRNGSRVAAF SFDRPSAMAE QLEAAGQEAL DFSCTIMVLG KTGVGKSATI NSIFGEAKFG SDAFQIGKKK VQDVVGTVQG IKVRETSSDI VLYLDRLDMQ
401: SRDYGDLTLL RTITEVLGSS IWFNTIVVLT QAASAPPEIS NAIWQAAGDV CLMNPVFLVE NHSKCRTNRV EQRVLPNGQV WKPHLLLLSF ASKILAETST
501: LLELRDSPPD ESEYDQLPAF KPLTKVQLAK LSQEQKKTYN DELEYREKLF MKKQLKEERK RRRMMKKMHA ATKDLPMDTN ETVEEETGSA ASVRVPMLDF
601: ALPASFDSDN PTHRYRYLDS SNQCLVRPVL EPNGWDDNVG YEGMNVERLF VIKDKIPLSF SSQLSTDKKD GNLQMEISVG KDLAYTLRSE TRFSNYRKNK
701: ATAGLSVTLL GDVMTSGVKV EDKLIVNK
101: LNDKESPAVG LAISNDKVDD QKDASVFCTS ASENRTVNLS RETVTAEDEN WKSSEGSVSK NNGKVGVNTA EFVSNQSKMF TGVRETEAGS ARNLVSSSGS
201: SMTRIPPPAQ PVGLGRAAPL LEPSPQVVQQ AWVHEAASSV QNQLVEEPTN GESEEYDEIR EKLQMIRVKF LRLAHKVGQN PHNVVVAQVL YRLGLDEQMR
301: GRNGSRVAAF SFDRPSAMAE QLEAAGQEAL DFSCTIMVLG KTGVGKSATI NSIFGEAKFG SDAFQIGKKK VQDVVGTVQG IKVRETSSDI VLYLDRLDMQ
401: SRDYGDLTLL RTITEVLGSS IWFNTIVVLT QAASAPPEIS NAIWQAAGDV CLMNPVFLVE NHSKCRTNRV EQRVLPNGQV WKPHLLLLSF ASKILAETST
501: LLELRDSPPD ESEYDQLPAF KPLTKVQLAK LSQEQKKTYN DELEYREKLF MKKQLKEERK RRRMMKKMHA ATKDLPMDTN ETVEEETGSA ASVRVPMLDF
601: ALPASFDSDN PTHRYRYLDS SNQCLVRPVL EPNGWDDNVG YEGMNVERLF VIKDKIPLSF SSQLSTDKKD GNLQMEISVG KDLAYTLRSE TRFSNYRKNK
701: ATAGLSVTLL GDVMTSGVKV EDKLIVNK
0001: MGDGTEFVVR SDREDKKLAE DRISDEQVVK NELVRSDEVR DDNEDEVFEE AIGSENDEQE EEEDPKRELF ESDDLPLVET LKSSMVEHEV EDFEEAVGDL
0101: DETSSNEGGV KDFTAVGESH GAGEAEFDVL ATKMNGDKGE GGGGGSYDKV ESSLDVVDTT ENATSTNTNG SNLAAEHVGI ENGKTHSFLG NGIASPKNKE
0201: VVAEVIPKDD GIEEPWNDGI EVDNWEERVD GIQTEQEVEE GEGTTENQFE KRTEEEVVEG EGTSKNLFEK QTEQDVVEGE GTSKDLFENG SVCMDSESEA
0301: ERNGETGAAY TSNIVTNASG DNEVSSAVTS SPLEESSSGE KGETEGDSTC LKPEQHLASS PHSYPESTEV HSNSGSPGVT SREHKPVQSA NGGHDVQSPQ
0401: PNKELEKQQS SRVHVDPEIT ENSHVETEPE VVSSVSPTES RSNPAALPPA RPAGLGRASP LLEPASRAPQ QSRVNGNGSH NQFQQAEDST TTEADEHDET
0501: REKLQLIRVK FLRLAHRLGQ TPHNVVVAQV LYRLGLAEQL RGRNGSRVGA FSFDRASAMA EQLEAAGQDP LDFSCTIMVL GKSGVGKSAT INSIFDEVKF
0601: CTDAFQMGTK RVQDVEGLVQ GIKVRVIDTP GLLPSWSDQA KNEKILNSVK AFIKKNPPDI VLYLDRLDMQ SRDSGDMPLL RTISDVFGPS IWFNAIVGLT
0701: HAASVPPDGP NGTASSYDMF VTQRSHVIQQ AIRQAAGDMR LMNPVSLVEN HSACRTNRAG QRVLPNGQVW KPHLLLLSFA SKILAEANAL LKLQDNIPGR
0801: PFAARSKAPP LPFLLSSLLQ SRPQPKLPEQ QYGDEEDEDD LEESSDSDEE SEYDQLPPFK SLTKAQMATL SKSQKKQYLD EMEYREKLLM KKQMKEERKR
0901: RKMFKKFAAE IKDLPDGYSE NVEEESGGPA SVPVPMPDLS LPASFDSDNP THRYRYLDSS NQWLVRPVLE THGWDHDIGY EGVNAERLFV VKEKIPISVS
1001: GQVTKDKKDA NVQLEMASSV KHGEGKSTSL GFDMQTVGKE LAYTLRSETR FNNFRRNKAA AGLSVTHLGD SVSAGLKVED KFIASKWFRI VMSGGAMTSR
1101: GDFAYGGTLE AQLRDKDYPL GRFLTTLGLS VMDWHGDLAI GGNIQSQVPI GRSSNLIARA NLNNRGAGQV SVRVNSSEQL QLAMVAIVPL FKKLLSYYYP
1201: QTQYGQ
0101: DETSSNEGGV KDFTAVGESH GAGEAEFDVL ATKMNGDKGE GGGGGSYDKV ESSLDVVDTT ENATSTNTNG SNLAAEHVGI ENGKTHSFLG NGIASPKNKE
0201: VVAEVIPKDD GIEEPWNDGI EVDNWEERVD GIQTEQEVEE GEGTTENQFE KRTEEEVVEG EGTSKNLFEK QTEQDVVEGE GTSKDLFENG SVCMDSESEA
0301: ERNGETGAAY TSNIVTNASG DNEVSSAVTS SPLEESSSGE KGETEGDSTC LKPEQHLASS PHSYPESTEV HSNSGSPGVT SREHKPVQSA NGGHDVQSPQ
0401: PNKELEKQQS SRVHVDPEIT ENSHVETEPE VVSSVSPTES RSNPAALPPA RPAGLGRASP LLEPASRAPQ QSRVNGNGSH NQFQQAEDST TTEADEHDET
0501: REKLQLIRVK FLRLAHRLGQ TPHNVVVAQV LYRLGLAEQL RGRNGSRVGA FSFDRASAMA EQLEAAGQDP LDFSCTIMVL GKSGVGKSAT INSIFDEVKF
0601: CTDAFQMGTK RVQDVEGLVQ GIKVRVIDTP GLLPSWSDQA KNEKILNSVK AFIKKNPPDI VLYLDRLDMQ SRDSGDMPLL RTISDVFGPS IWFNAIVGLT
0701: HAASVPPDGP NGTASSYDMF VTQRSHVIQQ AIRQAAGDMR LMNPVSLVEN HSACRTNRAG QRVLPNGQVW KPHLLLLSFA SKILAEANAL LKLQDNIPGR
0801: PFAARSKAPP LPFLLSSLLQ SRPQPKLPEQ QYGDEEDEDD LEESSDSDEE SEYDQLPPFK SLTKAQMATL SKSQKKQYLD EMEYREKLLM KKQMKEERKR
0901: RKMFKKFAAE IKDLPDGYSE NVEEESGGPA SVPVPMPDLS LPASFDSDNP THRYRYLDSS NQWLVRPVLE THGWDHDIGY EGVNAERLFV VKEKIPISVS
1001: GQVTKDKKDA NVQLEMASSV KHGEGKSTSL GFDMQTVGKE LAYTLRSETR FNNFRRNKAA AGLSVTHLGD SVSAGLKVED KFIASKWFRI VMSGGAMTSR
1101: GDFAYGGTLE AQLRDKDYPL GRFLTTLGLS VMDWHGDLAI GGNIQSQVPI GRSSNLIARA NLNNRGAGQV SVRVNSSEQL QLAMVAIVPL FKKLLSYYYP
1201: QTQYGQ
Arabidopsis Description
TOC132Translocase of chloroplast 132, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SLF3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.