Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 2
- plastid 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400078922 | Potato | endoplasmic reticulum | 97.61 | 63.32 |
| VIT_11s0118g00260.t01 | Wine grape | cytosol, mitochondrion, plastid | 67.22 | 45.74 |
| KRH20190 | Soybean | cytosol | 61.33 | 41.89 |
| KRH03616 | Soybean | mitochondrion | 61.14 | 41.71 |
| GSMUA_Achr1P09910_001 | Banana | mitochondrion | 52.3 | 37.47 |
| Bra002291.1-P | Field mustard | cytosol | 53.41 | 37.04 |
| CDX92471 | Canola | cytosol | 53.41 | 37.04 |
| AT5G20300.4 | Thale cress | cytosol | 53.78 | 36.82 |
| CDY35813 | Canola | cytosol | 53.04 | 36.78 |
| HORVU5Hr1G031380.1 | Barley | mitochondrion | 50.28 | 34.6 |
| Zm00001d035254_P001 | Maize | plastid | 49.91 | 34.57 |
| TraesCS5D01G120200.1 | Wheat | mitochondrion | 49.72 | 34.39 |
| Os12t0197400-01 | Rice | mitochondrion | 49.72 | 34.31 |
| EES15811 | Sorghum | mitochondrion | 49.54 | 34.22 |
| TraesCS5A01G112900.1 | Wheat | mitochondrion | 49.17 | 34.06 |
| TraesCS5B01G109100.1 | Wheat | mitochondrion | 48.8 | 33.72 |
| Solyc11g043010.1.1 | Tomato | nucleus | 27.99 | 20.88 |
| Solyc03g095220.2.1 | Tomato | plastid | 9.02 | 18.92 |
| Solyc01g080780.2.1 | Tomato | nucleus | 36.83 | 18.15 |
| Solyc01g111240.2.1 | Tomato | nucleus | 40.88 | 16.55 |
| Solyc05g052160.2.1 | Tomato | plastid | 8.66 | 15.61 |
| Solyc09g074940.1.1 | Tomato | plastid | 37.75 | 14.61 |
Protein Annotations
| MapMan:23.1.2.2 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005525 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0045036 |
| InterPro:G_AIG1 | InterPro:IPR006703 | UniProt:K4CBN5 | PFAM:PF11886 | PFscan:PS51720 | PANTHER:PTHR10903 |
| PANTHER:PTHR10903:SF68 | EnsemblPlantsGene:Solyc07g007650.1 | EnsemblPlants:Solyc07g007650.1.1 | InterPro:TOC159_MAD | UniParc:UPI000276ADFE | SEG:seg |
Description
Translocase of chloroplast 90, chloroplastic [Source:Projected from Arabidopsis thaliana (AT5G20300) UniProtKB/Swiss-Prot;Acc:Q6S5G3]
Coordinates
chr7:+:2303928..2305559
Molecular Weight (calculated)
60536.8 Da
IEP (calculated)
5.108
GRAVY (calculated)
-0.343
Length
543 amino acids
Sequence
(BLAST)
(BLAST)
001: MVLYFERLDL INTGYSDFPL LKLITEVFGP AIWFNTILVM THSSFNLPEG TNGYPVNYES FVTTCTDLVQ HYIHQAISDT KLENPVILVE NDPNCKTNNA
101: GEKILPNGQV WKSQLLLLCI CAKVLSDVNT LLDFEDSLKV GPSNVGRLPS LPHLLSSFLK HRAQIRRGGA ENEIDEVSLL DSDDEDDEYD QLPPIRILTK
201: SQFERLSGSQ KKDYLDELDY RETLYLKKQL IEEARRQREK RVSSSEGKAA PDDESDNQQE GPPEPVLLPD MAIPPSFDSD CPIHRYRCLI TSEQWLARPV
301: LDPNGWDHDV SFDGINLESS AEIRKNIFAS VNGQMSKDKQ DFSVQSEFAA ALTNPGGPTY AVGLDVQSAN KELICTIHSN AKVRTLRTNV AECGISVIPF
401: GDKYFLGAKC EDSFTIGKRL KFNVNAGRMG GAGQAAYGGS FVATLRGRDY PVRNESLSLS MTVLSLNKEM VLSGNLQTDF RVSRGTNMSV SANLNNQKMG
501: QVSIKTSSSE RMEIAFIALF SIARALLRRK RNDQLIEDSL VAR
101: GEKILPNGQV WKSQLLLLCI CAKVLSDVNT LLDFEDSLKV GPSNVGRLPS LPHLLSSFLK HRAQIRRGGA ENEIDEVSLL DSDDEDDEYD QLPPIRILTK
201: SQFERLSGSQ KKDYLDELDY RETLYLKKQL IEEARRQREK RVSSSEGKAA PDDESDNQQE GPPEPVLLPD MAIPPSFDSD CPIHRYRCLI TSEQWLARPV
301: LDPNGWDHDV SFDGINLESS AEIRKNIFAS VNGQMSKDKQ DFSVQSEFAA ALTNPGGPTY AVGLDVQSAN KELICTIHSN AKVRTLRTNV AECGISVIPF
401: GDKYFLGAKC EDSFTIGKRL KFNVNAGRMG GAGQAAYGGS FVATLRGRDY PVRNESLSLS MTVLSLNKEM VLSGNLQTDF RVSRGTNMSV SANLNNQKMG
501: QVSIKTSSSE RMEIAFIALF SIARALLRRK RNDQLIEDSL VAR
001: MLIRAEESEL KNVKLRQDRA KALAREQESS GIPELDFSLR ILVLGKTGVG KSATINSIFG QPKSETDAFR PGTDRIEEVM GTVSGVKVTF IDTPGFHPLS
101: SSSTRKNRKI LLSIKRYVKK RPPDVVLYLD RLDMIDMRYS DFSLLQLITE IFGAAIWLNT ILVMTHSAAT TEGRNGQSVN YESYVGQRMD VVQHYIHQAV
201: SDTKLENPVL LVENHPSCKK NLAGEYVLPN GVVWKPQFMF LCVCTKVLGD VQSLLRFRDS IGLGQPSSTR TASLPHLLSV FLRRRLSSGA DETEKEIDKL
301: LNLDLEEEDE YDQLPTIRIL GKSRFEKLSK SQKKEYLDEL DYRETLYLKK QLKEECRRRR DEKLVEEENL EDTEQRDQAA VPLPDMAGPD SFDSDFPAHR
401: YRCVSAGDQW LVRPVYDPQG WDRDVGFDGI NIETAAKINR NLFASATGQV SRDKQRFTIQ SETNAAYTRN FREQTFSVAV DLQSSGEDLV YSFQGGTKLQ
501: TFKHNTTDVG VGLTSFGGKY YVGGKLEDTL LVGKRVKLTA NAGQMRGSGQ TANGGSFEAC IRGRDYPVRN EQIGLTMTAL SFKRELVLNY GLQTQFRPAR
601: GTNIDVNINM NNRKMGKINV KLNSSEHWEI ALISALTMFK ALVRRSKTEM TEENEEEKIV NFLVS
101: SSSTRKNRKI LLSIKRYVKK RPPDVVLYLD RLDMIDMRYS DFSLLQLITE IFGAAIWLNT ILVMTHSAAT TEGRNGQSVN YESYVGQRMD VVQHYIHQAV
201: SDTKLENPVL LVENHPSCKK NLAGEYVLPN GVVWKPQFMF LCVCTKVLGD VQSLLRFRDS IGLGQPSSTR TASLPHLLSV FLRRRLSSGA DETEKEIDKL
301: LNLDLEEEDE YDQLPTIRIL GKSRFEKLSK SQKKEYLDEL DYRETLYLKK QLKEECRRRR DEKLVEEENL EDTEQRDQAA VPLPDMAGPD SFDSDFPAHR
401: YRCVSAGDQW LVRPVYDPQG WDRDVGFDGI NIETAAKINR NLFASATGQV SRDKQRFTIQ SETNAAYTRN FREQTFSVAV DLQSSGEDLV YSFQGGTKLQ
501: TFKHNTTDVG VGLTSFGGKY YVGGKLEDTL LVGKRVKLTA NAGQMRGSGQ TANGGSFEAC IRGRDYPVRN EQIGLTMTAL SFKRELVLNY GLQTQFRPAR
601: GTNIDVNINM NNRKMGKINV KLNSSEHWEI ALISALTMFK ALVRRSKTEM TEENEEEKIV NFLVS
Arabidopsis Description
TOC90Translocase of chloroplast 90, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q6S5G3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.