CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 4
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH20190	Soybean	cytosol	93.59	93.71
VIT_11s0118g00260.t01	Wine grape	cytosol, mitochondrion, plastid	63.69	63.53
Solyc07g007650.1.1	Tomato	cytosol	41.71	61.14
PGSC0003DMT400078922	Potato	endoplasmic reticulum	57.54	54.72
AT5G20300.4	Thale cress	cytosol	52.14	52.33
CDY35813	Canola	cytosol	51.13	51.98
GSMUA_Achr1P09910_001	Banana	mitochondrion	49.37	51.85
CDX92471	Canola	cytosol	50.75	51.6
Bra002291.1-P	Field mustard	cytosol	50.38	51.21
Zm00001d035254_P001	Maize	plastid	46.36	47.07
HORVU5Hr1G031380.1	Barley	mitochondrion	46.61	47.02
Os12t0197400-01	Rice	mitochondrion	46.36	46.89
EES15811	Sorghum	mitochondrion	46.11	46.69
TraesCS5D01G120200.1	Wheat	mitochondrion	45.98	46.62
TraesCS5A01G112900.1	Wheat	mitochondrion	45.85	46.56
TraesCS5B01G109100.1	Wheat	mitochondrion	45.85	46.44
KRH30746	Soybean	cytosol	6.41	38.93
KRH64901	Soybean	cytosol	10.68	27.16
KRG94982	Soybean	cytosol	10.55	26.92
KRH43000	Soybean	nucleus	37.56	25.23
KRH24252	Soybean	mitochondrion	38.19	25.1
KRH59116	Soybean	nucleus	36.93	23.71
KRH29257	Soybean	endoplasmic reticulum	38.07	22.17
KRH02257	Soybean	cytosol	16.71	15.47

Protein Annotations

EntrezGene:100796846	MapMan:23.1.2.2	Gene3D:3.40.50.300	EMBL:ACUP02010355	EnsemblPlantsGene:GLYMA_17G109200	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005525	GO:GO:0016787	GO:GO:0016817
InterPro:G_AIG1	UniProt:I1MU33	InterPro:IPR006703	EnsemblPlants:KRH03616	ProteinID:KRH03616	ProteinID:KRH03616.1
ProteinID:KRH03617.1	InterPro:P-loop_NTPase	PFAM:PF04548	PFAM:PF11886	PFscan:PS51720	PANTHER:PTHR10903
PANTHER:PTHR10903:SF68	SUPFAM:SSF52540	TIGRFAMs:TIGR00993	InterPro:TOC159_MAD	InterPro:Toc86_159	UniParc:UPI000233E0A9
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr17:+:8553496..8558333

Molecular Weight (calculated)

89169.4 Da

IEP (calculated)

7.992

GRAVY (calculated)

-0.355

Length

796 amino acids

Sequence
(BLAST)

001: MKGVRDWVFS QILSKSLVSP SPLSASNSLY AGEHRNGDVN EQGSDHSASS VSSPIPSDSS NSSYGDQSNQ HSSSLQLVSD TEIYQYQHNT NGRRKDTLAK
101: VEELQVKFFR LLQRLGQSRE NFLVAKVLYR MHLASLIRAK ESDLKRVNHS SSRARAIASE QEATGMPQLD FCCRILVLGK TGVGKSATIN SIFGQAKTTT
201: GAFQPATNCI QEVVGNVNGL NLTFIDTPGF LPSSTNNMKR NKRVMLSIKR FIRKSSPDIV LFFERLDFIN AGYVDFPLLK LVTEVFGSAI WFNTIIVMTH
301: SSSAIPEGPD GYTFNYESYI SYCTNIVQQH IQQAVFDSKV ENPVLLVENH SRCPQNIMGE KILPNGQVWR SQLLLFCICT KVLGDVNSLL KFQNSVELGP
401: LNSPRIPSMP HLLSSLLRHR LVSNLSGTDD EIEEILLSDK KEEDEYDQLP SIRVLTKSQF EKLPEPLKKD YLDEMDYRET LYLKKQLKED YQRRKEKLLS
501: TDKKFLNGDN PDDQQAPTEP VLLPDMAVPA SFDSDCHSHR YRCLVSDDQL LVRPVLDLQG WDHDVGFDGI NLETTTEIKK NVYASVVGQM NKNKQDFSIQ
601: SECTAAYVDP LGPTYSMGVD VQSSGKDFIC TVHSNTKLKN IKHNIADCGV SLTSFVKKYY VGAKLEDTVF VGKRLKFVLN AGRMEGAGQM AYGGSFEANL
701: RGEDYPVRND NVSLTMTVLS FNKEMVLSGS LQSEFRLSRS SKASVSANLN SRKMGQICIK ISSSEHLQIA SVAILSIWKF LSRRKETKNL VKEVMD

Best Arabidopsis Sequence Match ( AT5G20300.2 )
(BLAST)

001: MKGFKDWVFA LSNSMASSRP LLGSDPFFRD PHQEQDNHSQ APAAPQPVTL SEPPCSTSSD LEILPPLSQQ QVPLESLYQS SIDLNGKKHN PLAKIGGLQV
101: QFLRLVQRFG QSQNNILVSK VLYRVHLAML IRAEESELKN VKLRQDRAKA LAREQESSGI PELDFSLRIL VLGKTGVGKS ATINSIFGQP KSETDAFRPG
201: TDRIEEVMGT VSGVKVTFID TPGFHPLSSS STRKNRKILL SIKRYVKKRP PDVVLYLDRL DMIDMRYSDF SLLQLITEIF GAAIWLNTIL VMTHSAATTE
301: GRNGQSVNYE SYVGQRMDVV QHYIHQAVSD TKLENPVLLV ENHPSCKKNL AGEYVLPNGV VWKPQFMFLC VCTKVLGDVQ SLLRFRDSIG LGQPSSTRTA
401: SLPHLLSVFL RRRLSSGADE TEKEIDKLLN LDLEEEDEYD QLPTIRILGK SRFEKLSKSQ KKEYLDELDY RETLYLKKQL KEECRRRRDE KLVEEENLED
501: TEQRDQAAVP LPDMAGPDSF DSDFPAHRYR CVSAGDQWLV RPVYDPQGWD RDVGFDGINI ETAAKINRNL FASATGQVSR DKQRFTIQSE TNAAYTRNFR
601: EQTFSVAVDL QSSGEDLVYS FQGGTKLQTF KHNTTDVGVG LTSFGGKYYV GGKLEDTLLV GKRVKLTANA GQMRGSGQTA NGGSFEACIR GRDYPVRNEQ
701: IGLTMTALSF KRELVLNYGL QTQFRPARGT NIDVNINMNN RKMGKINVKL NSSEHWEIAL ISALTMFKAL VRRSKTEMTE ENEEEKIVNF LVS

Arabidopsis Description

TOC90Translocase of chloroplast 90, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q6S5G3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.