CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG94982	Soybean	cytosol	95.53	95.83
PGSC0003DMT400013477	Potato	cytosol	71.25	74.09
VIT_02s0109g00360.t01	Wine grape	cytosol	71.89	72.58
Solyc03g095220.2.1	Tomato	plastid	59.42	71.81
VIT_16s0039g02670.t01	Wine grape	cytosol	68.05	69.16
PGSC0003DMT400030414	Potato	cytosol, plastid	66.13	68.77
Solyc05g052160.2.1	Tomato	plastid	64.86	67.44
GSMUA_Achr1P22210_001	Banana	cytosol	29.71	66.91
AT5G05000.3	Thale cress	cytosol	65.81	65.81
GSMUA_AchrUn_...	Banana	cytosol	65.18	65.38
CDY52130	Canola	cytosol, plastid	65.18	65.18
CDX80936	Canola	cytosol	64.86	64.86
KXG39799	Sorghum	cytosol	61.34	58.9
Os03t0240500-01	Rice	plastid	60.7	58.1
TraesCS4B01G228900.1	Wheat	cytosol	60.38	57.98
TraesCS4A01G072800.1	Wheat	golgi, plastid	60.38	57.98
TraesCS4D01G230000.1	Wheat	cytosol	60.06	57.67
Zm00001d028373_P002	Maize	cytosol	61.02	57.19
Zm00001d047965_P002	Maize	cytosol	60.06	53.11
HORVU4Hr1G064110.2	Barley	cytosol	60.06	52.81
CDX70178	Canola	cytosol	65.18	26.88
Bra009405.1-P	Field mustard	cytosol	62.94	26.44
KRH30746	Soybean	cytosol	6.07	14.5
KRH03616	Soybean	mitochondrion	27.16	10.68
KRH20190	Soybean	cytosol	26.84	10.57
KRH02257	Soybean	cytosol	28.11	10.23
KRH43000	Soybean	nucleus	30.35	8.02
KRH24252	Soybean	mitochondrion	30.03	7.76
KRH59116	Soybean	nucleus	30.35	7.66
KRH29257	Soybean	endoplasmic reticulum	29.71	6.8

Protein Annotations

EntrezGene:100787890	MapMan:23.1.2.3	Gene3D:3.40.50.300	EMBL:ACUP02001299	EnsemblPlantsGene:GLYMA_03G003600	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006886	GO:GO:0008150
GO:GO:0009507	GO:GO:0009527	GO:GO:0009536	GO:GO:0009707	GO:GO:0015031	GO:GO:0015450
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0046872	GO:GO:0071806	InterPro:G_AIG1
UniProt:I1JK18	InterPro:IPR006703	ProteinID:KRH64900.1	EnsemblPlants:KRH64901	ProteinID:KRH64901	ProteinID:KRH64901.1
ProteinID:KRH64902.1	InterPro:P-loop_NTPase	PFAM:PF04548	PIRSF:PIRSF038134	PFscan:PS51720	PANTHER:PTHR10903
PANTHER:PTHR10903:SF43	SUPFAM:SSF52540	TIGRFAMs:TIGR00991	InterPro:Toc34	UniParc:UPI0002337392	SEG:seg

Description

hypothetical protein

Coordinates

chr3:-:324972..330076

Molecular Weight (calculated)

34879.2 Da

IEP (calculated)

9.917

GRAVY (calculated)

-0.174

Length

313 amino acids

Sequence
(BLAST)

001: MASQITREWS GINTFAPATQ TKLLELLGKL KQENVNSLTI LVMGKGGVGK SSTVNSIIGD RVVSINPFQS EGPRPVIVSR SRAGFTLNII DTPGLIEGGY
101: INDMALDIIK RFLLNKTIDV LLYVDRLDVY RVDNLDKVVA KAITDSFGKG IWSKTILALT HAQFSPPDGL PYDEFFSQRS ESLLKVLRSG ARIKKEAFQA
201: ASIPVVLVEN SGRCNKNDSD EKVLPNGTAW IPNLVQTITD IALNQSESIH VDKNLIEGPN PNQRGKLWTP LVFAIQYFLI MKPIKGLIEK DIANERKPTW
301: ERRDAAFRKR DLY

Best Arabidopsis Sequence Match ( AT1G02280.1 )
(BLAST)

001: MGSLVREWVG FQQFPAATQE KLIEFFGKLK QKDMNSMTVL VLGKGGVGKS STVNSLIGEQ VVRVSPFQAE GLRPVMVSRT MGGFTINIID TPGLVEAGYV
101: NHQALELIKG FLVNRTIDVL LYVDRLDVYR VDELDKQVVI AITQTFGKEI WCKTLLVLTH AQFSPPDELS YETFSSKRSD SLLKTIRAGS KMRKQEFEDS
201: AIAVVYAENS GRCSKNDKDE KALPNGEAWI PNLVKAITDV ATNQRKAIHV DKKMVDGSYS DDKGKKLIPL IIGAQYLIVK MIQGAIRNDI KTSGKPL

Arabidopsis Description

TOC33Translocase of chloroplast 33, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O23680]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.