Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400013477 | Potato | cytosol | 82.9 | 85.38 |
| VIT_16s0039g02670.t01 | Wine grape | cytosol | 84.19 | 84.74 |
| Solyc03g095220.2.1 | Tomato | plastid | 70.65 | 84.56 |
| PGSC0003DMT400030414 | Potato | cytosol, plastid | 77.1 | 79.4 |
| Solyc05g052160.2.1 | Tomato | plastid | 75.48 | 77.74 |
| GSMUA_AchrUn_... | Banana | cytosol | 76.45 | 75.96 |
| GSMUA_Achr1P22210_001 | Banana | cytosol | 33.87 | 75.54 |
| KRG94982 | Soybean | cytosol | 73.55 | 73.08 |
| KRH64901 | Soybean | cytosol | 72.58 | 71.89 |
| AT5G05000.3 | Thale cress | cytosol | 71.29 | 70.61 |
| CDY52130 | Canola | cytosol, plastid | 70.65 | 69.97 |
| CDX80936 | Canola | cytosol | 69.68 | 69.01 |
| KXG39799 | Sorghum | cytosol | 68.39 | 65.03 |
| TraesCS4A01G072800.1 | Wheat | golgi, plastid | 68.06 | 64.72 |
| TraesCS4B01G228900.1 | Wheat | cytosol | 68.06 | 64.72 |
| TraesCS4D01G230000.1 | Wheat | cytosol | 67.74 | 64.42 |
| Os03t0240500-01 | Rice | plastid | 67.74 | 64.22 |
| Zm00001d028373_P002 | Maize | cytosol | 67.74 | 62.87 |
| Zm00001d047965_P002 | Maize | cytosol | 67.74 | 59.32 |
| HORVU4Hr1G064110.2 | Barley | cytosol | 67.74 | 58.99 |
| CDX70178 | Canola | cytosol | 71.29 | 29.12 |
| Bra009405.1-P | Field mustard | cytosol | 68.06 | 28.32 |
| VIT_11s0118g00260.t01 | Wine grape | cytosol, mitochondrion, plastid | 28.06 | 10.9 |
| VIT_03s0038g02070.t01 | Wine grape | nucleus | 31.61 | 7.69 |
| VIT_05s0020g01290.t01 | Wine grape | cytosol | 30.32 | 7.28 |
| VIT_07s0005g00180.t01 | Wine grape | plastid | 32.58 | 6.89 |
Protein Annotations
| EntrezGene:100257906 | wikigene:100257906 | MapMan:23.1.2.3 | Gene3D:3.40.50.300 | EMBL:AM471105 | ProteinID:CAN63847 |
| ProteinID:CAN63847.1 | ProteinID:CBI23265 | ProteinID:CBI23265.3 | UniProt:D7SYM8 | EMBL:FN595250 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 |
| GO:GO:0009507 | GO:GO:0009527 | GO:GO:0009536 | GO:GO:0009707 | GO:GO:0015031 | GO:GO:0015450 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0046872 | GO:GO:0071806 | InterPro:G_AIG1 |
| InterPro:IPR006703 | EntrezGene:LOC100257906 | wikigene:LOC100257906 | InterPro:P-loop_NTPase | PFAM:PF04548 | PIRSF:PIRSF038134 |
| PFscan:PS51720 | PANTHER:PTHR10903 | PANTHER:PTHR10903:SF43 | SUPFAM:SSF52540 | TIGR:TC54467 | TIGR:TC55053 |
| TIGRFAMs:TIGR00991 | InterPro:Toc34 | UniParc:UPI00015CD3C6 | ArrayExpress:VIT_02s0109g00360 | EnsemblPlantsGene:VIT_02s0109g00360 | EnsemblPlants:VIT_02s0109g00360.t01 |
| unigene:Vvi.8892 | RefSeq:XP_002274573 | RefSeq:XP_002274573.1 | RefSeq:XP_010664573.1 | RefSeq:XP_010664575.1 | : |
Description
Translocase of chloroplast [Source:UniProtKB/TrEMBL;Acc:D7SYM8]
Coordinates
chr2:-:13004318..13007877
Molecular Weight (calculated)
34631.1 Da
IEP (calculated)
10.198
GRAVY (calculated)
-0.230
Length
310 amino acids
Sequence
(BLAST)
(BLAST)
001: MASQLIREWT GIQQFPPVTQ TKLIELLGKL KQENVSTLTI LVMGKGGVGK SSTVNSIIGE RAVAVSAFQS EGPRPVMVSR SRAGFTLNII DTPGLVEGGY
101: VNDQALEIIK RFLLNKTIDV LLYVDRLDAY RVDNLDRQVV KAITDSFGKE IWRRGVVVLT HAQLSPPDGL NYEDFFSKRS EALMKVVRSG ARLRKQDIQD
201: SGIPVVLVEN SGRCHKNESD EKILPNGTAW IPNLVKTITD AVSNGSKGIL VDKKLIEGPN PNERGKLLIP FILAFQYFFI VKRIQRAIKS DMAKERKAPW
301: ESREANRYEP
101: VNDQALEIIK RFLLNKTIDV LLYVDRLDAY RVDNLDRQVV KAITDSFGKE IWRRGVVVLT HAQLSPPDGL NYEDFFSKRS EALMKVVRSG ARLRKQDIQD
201: SGIPVVLVEN SGRCHKNESD EKILPNGTAW IPNLVKTITD AVSNGSKGIL VDKKLIEGPN PNERGKLLIP FILAFQYFFI VKRIQRAIKS DMAKERKAPW
301: ESREANRYEP
001: MAALQTLREW IGIQQFPPAT QSKLLEILGK YKEEDVSSLT VLVMGKGGVG KSSTVNSVIG EKAAAVSTFQ SEGLRPTLVS RTRSGFTLNI IDTPGLIEGG
101: YVNDQAINII KRFLLNMTID VLLYVDRLDV YRVDDLDRQV VGAITDAFGK EIWKKSALVL THAQFSPPDG LNYNHFVSKR SNALLKVIQT GAQLKKQDLQ
201: GFSIPVILVE NSGRCHKNES DEKILPCGTS WIPNLFNKIT EISFNGNKAI HVDKKLVEGP NPNERGKKLI PLMFAFQYLL VMKPLVRAIK SDVSRESKPA
301: WELRDSGLAS RRS
101: YVNDQAINII KRFLLNMTID VLLYVDRLDV YRVDDLDRQV VGAITDAFGK EIWKKSALVL THAQFSPPDG LNYNHFVSKR SNALLKVIQT GAQLKKQDLQ
201: GFSIPVILVE NSGRCHKNES DEKILPCGTS WIPNLFNKIT EISFNGNKAI HVDKKLVEGP NPNERGKKLI PLMFAFQYLL VMKPLVRAIK SDVSRESKPA
301: WELRDSGLAS RRS
Arabidopsis Description
TOC34Translocase of chloroplast 34, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q38906]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.