Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KXG39799 | Sorghum | cytosol | 87.57 | 95.09 |
| Zm00001d028373_P002 | Maize | cytosol | 87.29 | 92.52 |
| Os03t0240500-01 | Rice | plastid | 81.64 | 88.38 |
| TraesCS4B01G228900.1 | Wheat | cytosol | 79.66 | 86.5 |
| TraesCS4A01G072800.1 | Wheat | golgi, plastid | 79.66 | 86.5 |
| TraesCS4D01G230000.1 | Wheat | cytosol | 79.38 | 86.2 |
| HORVU4Hr1G064110.2 | Barley | cytosol | 78.81 | 78.37 |
| GSMUA_Achr1P22210_001 | Banana | cytosol | 28.81 | 73.38 |
| VIT_02s0109g00360.t01 | Wine grape | cytosol | 59.32 | 67.74 |
| PGSC0003DMT400013477 | Potato | cytosol | 57.34 | 67.44 |
| VIT_16s0039g02670.t01 | Wine grape | cytosol | 58.19 | 66.88 |
| Solyc03g095220.2.1 | Tomato | plastid | 47.46 | 64.86 |
| PGSC0003DMT400030414 | Potato | cytosol, plastid | 54.8 | 64.45 |
| Solyc05g052160.2.1 | Tomato | plastid | 54.24 | 63.79 |
| AT5G05000.3 | Thale cress | cytosol | 55.08 | 62.3 |
| CDX98810 | Canola | cytosol | 54.52 | 61.66 |
| KRG94982 | Soybean | cytosol | 54.24 | 61.54 |
| CDY52130 | Canola | cytosol, plastid | 53.95 | 61.02 |
| KRH64901 | Soybean | cytosol | 53.11 | 60.06 |
| CDX80936 | Canola | cytosol | 53.11 | 60.06 |
| CDY55323 | Canola | cytosol | 46.33 | 55.22 |
| Bra033311.1-P | Field mustard | cytosol | 46.33 | 55.03 |
| CDX89987 | Canola | cytosol | 46.33 | 55.03 |
| CDY32453 | Canola | cytosol | 46.05 | 54.88 |
| Bra032612.1-P | Field mustard | cytosol | 46.05 | 54.88 |
| AT1G02280.1 | Thale cress | cytosol | 46.05 | 54.88 |
| CDY15228 | Canola | cytosol | 46.05 | 54.7 |
| CDX70178 | Canola | cytosol | 54.8 | 25.56 |
| Bra009405.1-P | Field mustard | cytosol | 52.26 | 24.83 |
| Zm00001d035254_P001 | Maize | plastid | 22.32 | 10.08 |
| Zm00001d047130_P001 | Maize | cytosol | 26.55 | 9.19 |
| Zm00001d029846_P001 | Maize | plastid | 25.71 | 9.13 |
| Zm00001d010852_P002 | Maize | plastid | 27.12 | 7.95 |
| Zm00001d034755_P001 | Maize | cytosol | 25.42 | 7.8 |
| Zm00001d012893_P002 | Maize | cytosol, plastid | 24.86 | 7.73 |
| Zm00001d035812_P003 | Maize | plastid | 26.55 | 7.23 |
| CDX98809 | Canola | cytosol | 0.85 | 0.67 |
Protein Annotations
| MapMan:23.1.2.3 | Gene3D:3.40.50.300 | EntrezGene:542502 | UniProt:A0A1D6PF59 | ProteinID:AQL08163.1 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 |
| GO:GO:0009507 | GO:GO:0009527 | GO:GO:0009536 | GO:GO:0009707 | GO:GO:0015031 | GO:GO:0015450 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0046872 | GO:GO:0071806 | InterPro:G_AIG1 |
| InterPro:IPR006703 | InterPro:P-loop_NTPase | PFAM:PF04548 | PIRSF:PIRSF038134 | PFscan:PS51720 | PANTHER:PTHR10903 |
| PANTHER:PTHR10903:SF43 | SUPFAM:SSF52540 | TMHMM:TMhelix | InterPro:Toc34 | UniParc:UPI000844AF23 | EnsemblPlantsGene:Zm00001d047965 |
| EnsemblPlants:Zm00001d047965_P002 | EnsemblPlants:Zm00001d047965_T002 | SEG:seg | : | : | : |
Description
translocon at outer membrane of chloroplast34 translocon at outer membrane of chloroplast34
Coordinates
chr9:+:146540635..146546312
Molecular Weight (calculated)
39682.4 Da
IEP (calculated)
9.580
GRAVY (calculated)
-0.157
Length
354 amino acids
Sequence
(BLAST)
(BLAST)
001: MASPIPREWV GLQQFPPATQ TELHELLGKL KEEDVSTLTI LVMGKGGVGK SSTVNSIVGE RIATVSAFQS EGLRPMMWSR TRAGFTLNII DTPGLIEGGY
101: INEQAVDIIK RFLLGKTIDV LLYVDRLDAY RMDTLDGQVI RAITNSFGKD IWRRSLVVLT HAQLSPPDGI EYNDFFTRRS EALLRYIHSG AGIKKREYGV
201: MHVFIYRITI SIMLCGIPMQ QLGAAMSDFP LPIALVENSG RCKTNEHGEK ILPDGTPWVP KLMKEITVVI SNGSKPIHVD QKLIDGPNPN NRWKMFIPII
301: LAVEYFLVVK GIRRAIHADI ANGKVDDWEQ RYRDLVGSRD PVEQKGSTTR NRKA
101: INEQAVDIIK RFLLGKTIDV LLYVDRLDAY RMDTLDGQVI RAITNSFGKD IWRRSLVVLT HAQLSPPDGI EYNDFFTRRS EALLRYIHSG AGIKKREYGV
201: MHVFIYRITI SIMLCGIPMQ QLGAAMSDFP LPIALVENSG RCKTNEHGEK ILPDGTPWVP KLMKEITVVI SNGSKPIHVD QKLIDGPNPN NRWKMFIPII
301: LAVEYFLVVK GIRRAIHADI ANGKVDDWEQ RYRDLVGSRD PVEQKGSTTR NRKA
001: MGSLVREWVG FQQFPAATQE KLIEFFGKLK QKDMNSMTVL VLGKGGVGKS STVNSLIGEQ VVRVSPFQAE GLRPVMVSRT MGGFTINIID TPGLVEAGYV
101: NHQALELIKG FLVNRTIDVL LYVDRLDVYR VDELDKQVVI AITQTFGKEI WCKTLLVLTH AQFSPPDELS YETFSSKRSD SLLKTIRAGS KMRKQEFEDS
201: AIAVVYAENS GRCSKNDKDE KALPNGEAWI PNLVKAITDV ATNQRKAIHV DKKMVDGSYS DDKGKKLIPL IIGAQYLIVK MIQGAIRNDI KTSGKPL
101: NHQALELIKG FLVNRTIDVL LYVDRLDVYR VDELDKQVVI AITQTFGKEI WCKTLLVLTH AQFSPPDELS YETFSSKRSD SLLKTIRAGS KMRKQEFEDS
201: AIAVVYAENS GRCSKNDKDE KALPNGEAWI PNLVKAITDV ATNQRKAIHV DKKMVDGSYS DDKGKKLIPL IIGAQYLIVK MIQGAIRNDI KTSGKPL
Arabidopsis Description
TOC33Translocase of chloroplast 33, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O23680]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.