Factsheet for Bra032612.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra015538.1-P
Bra027667.1-P
Bra030666.1-P
Bra032612.1-P
Bra033311.1-P
Bra034407.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G02280.1	Bra032612.1-P	AT1G02280.1	12869544
AT1G02280.1	Bra033311.1-P	AT1G02280.1	12869544
AT1G02280.1	Bra015538.1-P	AT1G06950.1	15829604
AT1G02280.1	Bra030666.1-P	AT1G06950.1	15829604
AT1G02280.1	Bra034407.1-P	AT1G35670.1	19130088
AT1G02280.1	Bra027667.1-P	AT1G63900.1	23118188

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY32453	Canola	cytosol	100.0	100.0
Bra033311.1-P	Field mustard	cytosol	96.3	95.97
AT1G02280.1	Thale cress	cytosol	93.27	93.27
GSMUA_Achr1P22210_001	Banana	cytosol	29.97	64.03
GSMUA_AchrUn_...	Banana	cytosol	62.29	59.29
TraesCS4B01G228900.1	Wheat	cytosol	58.59	53.37
TraesCS4A01G072800.1	Wheat	golgi, plastid	58.59	53.37
TraesCS4D01G230000.1	Wheat	cytosol	58.25	53.07
Os03t0240500-01	Rice	plastid	57.58	52.29
KXG39799	Sorghum	cytosol	56.23	51.23
Zm00001d028373_P002	Maize	cytosol	55.56	49.4
HORVU4Hr1G064110.2	Barley	cytosol	57.91	48.31
Zm00001d047965_P002	Maize	cytosol	54.88	46.05
Bra009405.1-P	Field mustard	cytosol	59.6	23.76
Bra006330.1-P	Field mustard	cytosol	24.92	11.16
Bra018546.1-P	Field mustard	mitochondrion	29.29	9.75
Bra002291.1-P	Field mustard	cytosol	25.25	9.58
Bra022170.1-P	Field mustard	nucleus	28.62	8.0
Bra033515.1-P	Field mustard	cytosol	24.24	6.53
Bra036261.1-P	Field mustard	nucleus	27.61	5.28

Protein Annotations

MapMan:23.1.2.3	Gene3D:3.40.50.300	EnsemblPlantsGene:Bra032612	EnsemblPlants:Bra032612.1	EnsemblPlants:Bra032612.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006810	GO:GO:0006886	GO:GO:0008150
GO:GO:0009507	GO:GO:0009527	GO:GO:0009536	GO:GO:0009707	GO:GO:0015031	GO:GO:0015450
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0046872	GO:GO:0071806	InterPro:G_AIG1
InterPro:IPR006703	UniProt:M4EUX9	InterPro:P-loop_NTPase	PFAM:PF04548	PIRSF:PIRSF038134	PFscan:PS51720
PANTHER:PTHR10903	PANTHER:PTHR10903:SF43	SUPFAM:SSF52540	TIGRFAMs:TIGR00991	InterPro:Toc34	UniParc:UPI00025430F0
SEG:seg	:	:	:	:	:

Description

AT1G02280 (E=4e-148) TOC33, ATTOC33, PPI1 | TOC33 (TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 33); GTP binding / GTPase/ protein binding

Coordinates

chrA09:+:36833221..36834619

Molecular Weight (calculated)

32991.0 Da

IEP (calculated)

9.444

GRAVY (calculated)

-0.146

Length

297 amino acids

Sequence
(BLAST)

001: MGSLVREWVG FQQFPAATQE RLIEFFTKLK QKDMNSLTVV VMGKGGVGKS STVNSLIGEQ VVRVSPFQAE GLRPVMVSRT MGGFTINIID TPGLVEAGYV
101: NHQALELIKG FLVNRTIDVL LYVDRLDVYR VDELDRQVVQ AITQTFGKEI WCKTLLVLTH AQFSPPDDLS YETFSSKRSD SLLRTIRAGS KMGKQQFEDS
201: AIEVVYAENS GRCSKNDKEE KALPNGEAWI PNLVKAITDV ATNQKKAIHV DKKMVDGSYS DDKGKKLIPL IIAAQYFVVK MIQGAIRSDV KISGKPL

Best Arabidopsis Sequence Match ( AT1G02280.2 )
(BLAST)

001: MGSLVREWVG FQQFPAATQE KLIEFFGKLK QKDMNSMTVL VLGKGGVGKS STVNSLIGEQ VVRVSPFQAE GLRPVMVSRT MGGFTINIID TPGLVEAGYV
101: NHQALELIKG FLVNRTIDVL LYVDRLDVYR VDELDKQVVI AITQTFGKEI WCKTLLVLTH AQFSPPDELS YETFSSKRSD SLLKTIRAGS KMRKQEFEDS
201: AIAVVYAENS GRCSKNDKDE KALPNGEAWI PNLVKAITDV ATNQRKAIHV DKKMVDGSYS DDKGKKLIPL IIGAQYLIVK MIQGAIRNDI KTSGKPL

Arabidopsis Description

TOC33Translocase of chloroplast 33, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O23680]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.