Factsheet for TraesCS5A01G112900.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G120200.1	Wheat	mitochondrion	97.83	97.71
TraesCS5B01G109100.1	Wheat	mitochondrion	97.58	97.33
HORVU5Hr1G031380.1	Barley	mitochondrion	92.86	92.27
Os12t0197400-01	Rice	mitochondrion	79.97	79.67
Zm00001d035254_P001	Maize	plastid	77.04	77.04
EES15811	Sorghum	mitochondrion	77.17	76.97
GSMUA_Achr1P09910_001	Banana	mitochondrion	51.53	53.3
VIT_11s0118g00260.t01	Wine grape	cytosol, mitochondrion, plastid	50.64	49.75
Solyc07g007650.1.1	Tomato	cytosol	34.06	49.17
KRH20190	Soybean	cytosol	46.56	45.91
KRH03616	Soybean	mitochondrion	46.56	45.85
PGSC0003DMT400078922	Potato	endoplasmic reticulum	47.83	44.8
Bra002291.1-P	Field mustard	cytosol	43.62	43.68
CDY35813	Canola	cytosol	43.49	43.55
CDX92471	Canola	cytosol	43.49	43.55
AT5G20300.4	Thale cress	cytosol	43.37	42.88
TraesCS1A01G208000.1	Wheat	cytosol	36.61	26.87
TraesCS4A01G072800.1	Wheat	golgi, plastid	10.33	24.85
TraesCS4A01G358400.1	Wheat	plastid	33.93	22.32
TraesCS1A01G093900.3	Wheat	cytosol, nucleus, plastid	37.12	20.44

Protein Annotations

EnsemblPlants:TraesCS5A01G112900.1	EnsemblPlantsGene:TraesCS5A01G112900	Gene3D:3.40.50.300	GO:GO:0000166	GO:GO:0003674	GO:GO:0005488
GO:GO:0005525	GO:GO:0006810	GO:GO:0008150	GO:GO:0045036	InterPro:G_AIG1	InterPro:IPR006703
InterPro:P-loop_NTPase	InterPro:TOC159_MAD	PANTHER:PTHR10903	PANTHER:PTHR10903:SF68	PFAM:PF04548	PFAM:PF11886
PFscan:PS51720	SEG:seg	SUPFAM:SSF52540	MapMan:23.1.2.2	:	:

Description

No Description!

Coordinates

chr5A:+:220953313..220963527

Molecular Weight (calculated)

86890.3 Da

IEP (calculated)

7.114

GRAVY (calculated)

-0.370

Length

784 amino acids

Sequence
(BLAST)

001: MMMNFRDWIS YRLGSSLLAA RPFAISRSDA GASQGDGEGT TQSEFVEIVS ANRFPSNDSR ALEVTSNPQA VSSGLLQPDH DHNKSDPLKQ VEALQIKFLR
101: LVHRTGVPPS TNVVAQVLYR LQLANLIKAG ESDAKTTNLA INKARVIAAE QEAPGGPDLD LPLRILLLGK TGVGKSATIN SMFDETKVAT NALVPGTSRI
201: KRVHGNIKGV RVTVIDTPGL LPHYHSQRRN RKILHAVKRF IKRNPPDIVL YFERLDHINS RCSDYPLLKL ITDTLGSSIW FNTVLVMTHC SSSPPEGPDG
301: HPLEYDAYTR YCKNVVERHI QLAASNTQLE NPIVLVDNHP MCRRNTRGER VLPNGQVWVS ELLLLCGATK LLAEANSLLK FEDSFLLSQA NARLPSLPHL
401: LSSLLKPSVS LSTEGVDNEM TELSDEEDEY DQLPPFRVLK RSEYEKLTKE QRTAYLDELD YRETSYLKQQ WKEGIRSQKL AEAQNTEASS AVADDYEEST
501: SPVVHISDME IPLSFDSDYP AHRYRHVITN DQLFRPVLDP QGWDHDIGFN GINFESCHDL KKNISTSIAG QMRKDKEDMY IQSECSVSYS DQRRYSLMGG
601: MDMQTASKDL VFTVHGDARF QNLPWNTTGG GISVTKFGSK YFSGAKLEDS ITIGKRIHLV ANAGRMVGGG QVADGGGLEV TVRGKDYPVR EGSTSMAATA
701: LSFEKETVIG ANLQSVFRVG RGSKLSVSAN VNSRNLGRLC VKISTSDHVE IALVVAVSLV QFLLRRRLLP TGKGHQQLDT DLDE

Best Arabidopsis Sequence Match ( AT5G20300.2 )
(BLAST)

001: MKGFKDWVFA LSNSMASSRP LLGSDPFFRD PHQEQDNHSQ APAAPQPVTL SEPPCSTSSD LEILPPLSQQ QVPLESLYQS SIDLNGKKHN PLAKIGGLQV
101: QFLRLVQRFG QSQNNILVSK VLYRVHLAML IRAEESELKN VKLRQDRAKA LAREQESSGI PELDFSLRIL VLGKTGVGKS ATINSIFGQP KSETDAFRPG
201: TDRIEEVMGT VSGVKVTFID TPGFHPLSSS STRKNRKILL SIKRYVKKRP PDVVLYLDRL DMIDMRYSDF SLLQLITEIF GAAIWLNTIL VMTHSAATTE
301: GRNGQSVNYE SYVGQRMDVV QHYIHQAVSD TKLENPVLLV ENHPSCKKNL AGEYVLPNGV VWKPQFMFLC VCTKVLGDVQ SLLRFRDSIG LGQPSSTRTA
401: SLPHLLSVFL RRRLSSGADE TEKEIDKLLN LDLEEEDEYD QLPTIRILGK SRFEKLSKSQ KKEYLDELDY RETLYLKKQL KEECRRRRDE KLVEEENLED
501: TEQRDQAAVP LPDMAGPDSF DSDFPAHRYR CVSAGDQWLV RPVYDPQGWD RDVGFDGINI ETAAKINRNL FASATGQVSR DKQRFTIQSE TNAAYTRNFR
601: EQTFSVAVDL QSSGEDLVYS FQGGTKLQTF KHNTTDVGVG LTSFGGKYYV GGKLEDTLLV GKRVKLTANA GQMRGSGQTA NGGSFEACIR GRDYPVRNEQ
701: IGLTMTALSF KRELVLNYGL QTQFRPARGT NIDVNINMNN RKMGKINVKL NSSEHWEIAL ISALTMFKAL VRRSKTEMTE ENEEEKIVNF LVS

Arabidopsis Description

TOC90Translocase of chloroplast 90, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q6S5G3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.