Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G053280.1 | Barley | mitochondrion | 63.04 | 97.13 |
| TraesCS1D01G211300.1 | Wheat | cytosol, golgi | 96.93 | 96.93 |
| TraesCS1A01G208000.1 | Wheat | cytosol | 95.34 | 95.88 |
| Os10t0548800-01 | Rice | cytosol, plasma membrane, plastid | 70.86 | 75.5 |
| EER91974 | Sorghum | cytosol | 67.88 | 73.71 |
| Zm00001d029846_P001 | Maize | plastid | 67.88 | 73.12 |
| Zm00001d047130_P001 | Maize | cytosol | 66.48 | 69.79 |
| CDX70657 | Canola | cytosol | 15.27 | 56.55 |
| CDX70659 | Canola | cytosol | 5.21 | 51.85 |
| CDY66172 | Canola | cytosol | 47.11 | 51.32 |
| CDX70551 | Canola | cytosol | 16.67 | 49.72 |
| PGSC0003DMT400024781 | Potato | cytosol | 48.42 | 49.1 |
| Bra006330.1-P | Field mustard | cytosol | 29.7 | 48.11 |
| CDX78660 | Canola | cytosol | 29.52 | 47.81 |
| AT3G16620.1 | Thale cress | cytosol | 48.14 | 47.47 |
| Solyc11g043010.1.1 | Tomato | nucleus | 31.1 | 45.88 |
| CDY43117 | Canola | cytosol | 47.11 | 45.83 |
| Bra022170.1-P | Field mustard | nucleus | 44.6 | 45.06 |
| CDX92086 | Canola | cytosol, endoplasmic reticulum, vacuole | 44.6 | 45.06 |
| KRH24252 | Soybean | mitochondrion | 50.19 | 44.51 |
| AT2G16640.3 | Thale cress | cytosol | 49.35 | 43.95 |
| VIT_03s0038g02070.t01 | Wine grape | nucleus | 51.12 | 43.06 |
| CDX92087 | Canola | cytosol | 47.3 | 42.98 |
| CDX70550 | Canola | cytosol | 11.27 | 42.76 |
| CDX70641 | Canola | cytosol | 31.84 | 42.64 |
| GSMUA_Achr8P19440_001 | Banana | cytosol | 45.25 | 40.47 |
| PGSC0003DMT400004034 | Potato | cytosol | 51.02 | 40.06 |
| Solyc01g111240.2.1 | Tomato | nucleus | 49.72 | 39.82 |
| KRH29257 | Soybean | endoplasmic reticulum | 50.47 | 39.65 |
| GSMUA_Achr11P... | Banana | cytosol | 47.86 | 36.45 |
| CDX70658 | Canola | cytosol | 4.28 | 35.94 |
| TraesCS5B01G109100.1 | Wheat | mitochondrion | 26.26 | 35.88 |
| TraesCS1B01G122000.4 | Wheat | cytosol, nucleus, plastid | 39.94 | 29.9 |
| TraesCS4B01G228900.1 | Wheat | cytosol | 8.29 | 27.3 |
| TraesCS5B01G514000.1 | Wheat | cytosol | 30.17 | 26.58 |
Protein Annotations
| MapMan:23.1.2.2 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005525 | GO:GO:0016787 | GO:GO:0016817 | InterPro:G_AIG1 | InterPro:IPR006703 | InterPro:P-loop_NTPase |
| PFAM:PF04548 | PFAM:PF11886 | PFscan:PS51720 | PANTHER:PTHR10903 | PANTHER:PTHR10903:SF47 | SUPFAM:SSF52540 |
| TIGRFAMs:TIGR00993 | InterPro:TOC159_MAD | InterPro:Toc86_159 | EnsemblPlantsGene:TraesCS1B01G222000 | EnsemblPlants:TraesCS1B01G222000.1 | TIGR:cd01853 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr1B:+:399333026..399336250
Molecular Weight (calculated)
116845.0 Da
IEP (calculated)
4.418
GRAVY (calculated)
-0.501
Length
1074 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDDSAIGEKR LPETEDRESP GGVAEEEVGR AQVGAEPAPD AAAAEVGGSG EILDAREGDA AEGVVQAQEG GGGEVVEVRQ RDAGGDEVVS DVAWAEATMD
0101: PSLSYDQQAA RNGVAQRNVP PTAVESDEDA DLFVEVEQQE LAGSDQSEEF FHNAVATVTG ESVAAECEEI EDDRPAEIGV EDDAHDEHRE RLEEEAMLEA
0201: IRQCVTDAVL AEHLDDEPEK GREDVPACDS NPELPMNSSE PEQVQEAMLV DQNKEQPEYS KGDTAARDSK FVVPTQSGGE PDVVVEELDD SNSSDDENKA
0301: SSAPARSSSA AAGQANGPSV LSRPAGLGSS SSLLPPPRPV QQVRANGPVA VDRDARQDTE SAGDDGDEND EIREKLQMIR VKFLRLANRF GQTPHNMVVS
0401: QVLYRLGLAE QIRRNGRGVF NFDRAQEMAE RLEAAGNEPL DLSCTILVLG KTGVGKSATI NSIFDDVKLE TDAFESSTRK VQEVVGMVEG IKVKVIDTPG
0501: LSSSSSDQHY NQKVLNSVKK ILSKNPPDIV LYFDRLDLQS RDYGDVPLLQ TISKVFGASV WFNAIVVLTH AASAPPDGPN GIPLSYEMFV TQRSHVVQQA
0601: IRQAAADVRL MNPVALVENH SACRTNRSGQ RVLPNGQVWK PQLLLLCFAS KVLAEANSFL KLQDSPAGKT SSTRVAPLPF LLSSLLQSRA PLKLPEEQFG
0701: DDDDLEDDLA DDYGSDDGSD YDDLPPFKRL TKAQLSKLNH AQRKAYLEEL DYREKLFYKK QLKEEHMRRK MMKKMAAEAR AREDDFGNNN VDDDVSTPTN
0801: VAVPMPDMVL PSTFDSDYPS HRYRFLDTPS EWLVRPVLET QGWDHDVGYE GVNVERLFAV KGKVPLSVSG QLTKDKKDSS LQMEVASSVK HGEGKTSSVG
0901: LDLQSVGKDM AYTIRGESRF KNFRRNNTAA GISATLLGDT LSAGLKIEDR LIVNKQLRLL VSGGTMSGKG DAAYGGRLEA TLRDKDYPIG RMLSTLAISV
1001: VDWHGDLAVG CNAQSQIPAG RSSNLIASLN LSNKGTGQVG IRLNSSEHLQ IALLALVPIF KNIWKLLDNY YESA
0101: PSLSYDQQAA RNGVAQRNVP PTAVESDEDA DLFVEVEQQE LAGSDQSEEF FHNAVATVTG ESVAAECEEI EDDRPAEIGV EDDAHDEHRE RLEEEAMLEA
0201: IRQCVTDAVL AEHLDDEPEK GREDVPACDS NPELPMNSSE PEQVQEAMLV DQNKEQPEYS KGDTAARDSK FVVPTQSGGE PDVVVEELDD SNSSDDENKA
0301: SSAPARSSSA AAGQANGPSV LSRPAGLGSS SSLLPPPRPV QQVRANGPVA VDRDARQDTE SAGDDGDEND EIREKLQMIR VKFLRLANRF GQTPHNMVVS
0401: QVLYRLGLAE QIRRNGRGVF NFDRAQEMAE RLEAAGNEPL DLSCTILVLG KTGVGKSATI NSIFDDVKLE TDAFESSTRK VQEVVGMVEG IKVKVIDTPG
0501: LSSSSSDQHY NQKVLNSVKK ILSKNPPDIV LYFDRLDLQS RDYGDVPLLQ TISKVFGASV WFNAIVVLTH AASAPPDGPN GIPLSYEMFV TQRSHVVQQA
0601: IRQAAADVRL MNPVALVENH SACRTNRSGQ RVLPNGQVWK PQLLLLCFAS KVLAEANSFL KLQDSPAGKT SSTRVAPLPF LLSSLLQSRA PLKLPEEQFG
0701: DDDDLEDDLA DDYGSDDGSD YDDLPPFKRL TKAQLSKLNH AQRKAYLEEL DYREKLFYKK QLKEEHMRRK MMKKMAAEAR AREDDFGNNN VDDDVSTPTN
0801: VAVPMPDMVL PSTFDSDYPS HRYRFLDTPS EWLVRPVLET QGWDHDVGYE GVNVERLFAV KGKVPLSVSG QLTKDKKDSS LQMEVASSVK HGEGKTSSVG
0901: LDLQSVGKDM AYTIRGESRF KNFRRNNTAA GISATLLGDT LSAGLKIEDR LIVNKQLRLL VSGGTMSGKG DAAYGGRLEA TLRDKDYPIG RMLSTLAISV
1001: VDWHGDLAVG CNAQSQIPAG RSSNLIASLN LSNKGTGQVG IRLNSSEHLQ IALLALVPIF KNIWKLLDNY YESA
0001: MGDGTEFVVR SDREDKKLAE DRISDEQVVK NELVRSDEVR DDNEDEVFEE AIGSENDEQE EEEDPKRELF ESDDLPLVET LKSSMVEHEV EDFEEAVGDL
0101: DETSSNEGGV KDFTAVGESH GAGEAEFDVL ATKMNGDKGE GGGGGSYDKV ESSLDVVDTT ENATSTNTNG SNLAAEHVGI ENGKTHSFLG NGIASPKNKE
0201: VVAEVIPKDD GIEEPWNDGI EVDNWEERVD GIQTEQEVEE GEGTTENQFE KRTEEEVVEG EGTSKNLFEK QTEQDVVEGE GTSKDLFENG SVCMDSESEA
0301: ERNGETGAAY TSNIVTNASG DNEVSSAVTS SPLEESSSGE KGETEGDSTC LKPEQHLASS PHSYPESTEV HSNSGSPGVT SREHKPVQSA NGGHDVQSPQ
0401: PNKELEKQQS SRVHVDPEIT ENSHVETEPE VVSSVSPTES RSNPAALPPA RPAGLGRASP LLEPASRAPQ QSRVNGNGSH NQFQQAEDST TTEADEHDET
0501: REKLQLIRVK FLRLAHRLGQ TPHNVVVAQV LYRLGLAEQL RGRNGSRVGA FSFDRASAMA EQLEAAGQDP LDFSCTIMVL GKSGVGKSAT INSIFDEVKF
0601: CTDAFQMGTK RVQDVEGLVQ GIKVRVIDTP GLLPSWSDQA KNEKILNSVK AFIKKNPPDI VLYLDRLDMQ SRDSGDMPLL RTISDVFGPS IWFNAIVGLT
0701: HAASVPPDGP NGTASSYDMF VTQRSHVIQQ AIRQAAGDMR LMNPVSLVEN HSACRTNRAG QRVLPNGQVW KPHLLLLSFA SKILAEANAL LKLQDNIPGR
0801: PFAARSKAPP LPFLLSSLLQ SRPQPKLPEQ QYGDEEDEDD LEESSDSDEE SEYDQLPPFK SLTKAQMATL SKSQKKQYLD EMEYREKLLM KKQMKEERKR
0901: RKMFKKFAAE IKDLPDGYSE NVEEESGGPA SVPVPMPDLS LPASFDSDNP THRYRYLDSS NQWLVRPVLE THGWDHDIGY EGVNAERLFV VKEKIPISVS
1001: GQVTKDKKDA NVQLEMASSV KHGEGKSTSL GFDMQTVGKE LAYTLRSETR FNNFRRNKAA AGLSVTHLGD SVSAGLKVED KFIASKWFRI VMSGGAMTSR
1101: GDFAYGGTLE AQLRDKDYPL GRFLTTLGLS VMDWHGDLAI GGNIQSQVPI GRSSNLIARA NLNNRGAGQV SVRVNSSEQL QLAMVAIVPL FKKLLSYYYP
1201: QTQYGQ
0101: DETSSNEGGV KDFTAVGESH GAGEAEFDVL ATKMNGDKGE GGGGGSYDKV ESSLDVVDTT ENATSTNTNG SNLAAEHVGI ENGKTHSFLG NGIASPKNKE
0201: VVAEVIPKDD GIEEPWNDGI EVDNWEERVD GIQTEQEVEE GEGTTENQFE KRTEEEVVEG EGTSKNLFEK QTEQDVVEGE GTSKDLFENG SVCMDSESEA
0301: ERNGETGAAY TSNIVTNASG DNEVSSAVTS SPLEESSSGE KGETEGDSTC LKPEQHLASS PHSYPESTEV HSNSGSPGVT SREHKPVQSA NGGHDVQSPQ
0401: PNKELEKQQS SRVHVDPEIT ENSHVETEPE VVSSVSPTES RSNPAALPPA RPAGLGRASP LLEPASRAPQ QSRVNGNGSH NQFQQAEDST TTEADEHDET
0501: REKLQLIRVK FLRLAHRLGQ TPHNVVVAQV LYRLGLAEQL RGRNGSRVGA FSFDRASAMA EQLEAAGQDP LDFSCTIMVL GKSGVGKSAT INSIFDEVKF
0601: CTDAFQMGTK RVQDVEGLVQ GIKVRVIDTP GLLPSWSDQA KNEKILNSVK AFIKKNPPDI VLYLDRLDMQ SRDSGDMPLL RTISDVFGPS IWFNAIVGLT
0701: HAASVPPDGP NGTASSYDMF VTQRSHVIQQ AIRQAAGDMR LMNPVSLVEN HSACRTNRAG QRVLPNGQVW KPHLLLLSFA SKILAEANAL LKLQDNIPGR
0801: PFAARSKAPP LPFLLSSLLQ SRPQPKLPEQ QYGDEEDEDD LEESSDSDEE SEYDQLPPFK SLTKAQMATL SKSQKKQYLD EMEYREKLLM KKQMKEERKR
0901: RKMFKKFAAE IKDLPDGYSE NVEEESGGPA SVPVPMPDLS LPASFDSDNP THRYRYLDSS NQWLVRPVLE THGWDHDIGY EGVNAERLFV VKEKIPISVS
1001: GQVTKDKKDA NVQLEMASSV KHGEGKSTSL GFDMQTVGKE LAYTLRSETR FNNFRRNKAA AGLSVTHLGD SVSAGLKVED KFIASKWFRI VMSGGAMTSR
1101: GDFAYGGTLE AQLRDKDYPL GRFLTTLGLS VMDWHGDLAI GGNIQSQVPI GRSSNLIARA NLNNRGAGQV SVRVNSSEQL QLAMVAIVPL FKKLLSYYYP
1201: QTQYGQ
Arabidopsis Description
TOC132Translocase of chloroplast 132, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SLF3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.