Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY66172 | Canola | cytosol | 87.95 | 98.48 |
| CDX92086 | Canola | cytosol, endoplasmic reticulum, vacuole | 82.43 | 85.61 |
| CDX92087 | Canola | cytosol | 85.69 | 80.03 |
| AT3G16620.1 | Thale cress | cytosol | 74.55 | 75.57 |
| CDX70657 | Canola | cytosol | 18.75 | 71.38 |
| CDX70659 | Canola | cytosol | 6.88 | 70.37 |
| CDX97269 | Canola | cytosol | 3.99 | 66.67 |
| HORVU1Hr1G053280.1 | Barley | mitochondrion | 41.49 | 65.71 |
| CDX78660 | Canola | cytosol | 39.31 | 65.46 |
| CDX70550 | Canola | cytosol | 16.39 | 63.96 |
| CDX70551 | Canola | cytosol | 20.83 | 63.89 |
| CDX70641 | Canola | cytosol | 42.93 | 59.1 |
| PGSC0003DMT400024781 | Potato | cytosol | 54.89 | 57.22 |
| Solyc11g043010.1.1 | Tomato | nucleus | 35.24 | 53.43 |
| KRH24252 | Soybean | mitochondrion | 57.97 | 52.85 |
| EER91974 | Sorghum | cytosol | 46.2 | 51.57 |
| Os10t0548800-01 | Rice | cytosol, plasma membrane, plastid | 46.74 | 51.19 |
| Zm00001d029846_P001 | Maize | plastid | 45.56 | 50.45 |
| VIT_03s0038g02070.t01 | Wine grape | nucleus | 58.24 | 50.43 |
| CDX70658 | Canola | cytosol | 5.8 | 50.0 |
| Zm00001d047130_P001 | Maize | cytosol | 45.56 | 49.17 |
| TraesCS1B01G222000.1 | Wheat | cytosol | 45.83 | 47.11 |
| KRH29257 | Soybean | endoplasmic reticulum | 57.88 | 46.74 |
| TraesCS1A01G208000.1 | Wheat | cytosol | 45.02 | 46.54 |
| TraesCS1D01G211300.1 | Wheat | cytosol, golgi | 45.2 | 46.46 |
| Solyc01g111240.2.1 | Tomato | nucleus | 55.89 | 46.01 |
| CDY50376 | Canola | cytosol | 28.99 | 45.91 |
| PGSC0003DMT400004034 | Potato | cytosol | 56.88 | 45.91 |
| GSMUA_Achr8P19440_001 | Banana | cytosol | 44.84 | 41.22 |
| CDX97270 | Canola | cytosol | 16.3 | 41.0 |
| CDX91288 | Canola | cytosol | 26.54 | 37.28 |
| GSMUA_Achr11P... | Banana | cytosol | 46.65 | 36.52 |
| CDY35813 | Canola | cytosol | 25.63 | 36.14 |
| CDX92471 | Canola | cytosol | 25.63 | 36.14 |
| CDY52130 | Canola | cytosol, plastid | 8.24 | 29.07 |
| CDX98810 | Canola | cytosol | 8.15 | 28.75 |
| CDX80936 | Canola | cytosol | 8.15 | 28.75 |
| CDX89987 | Canola | cytosol | 7.7 | 28.52 |
| CDY55323 | Canola | cytosol | 7.61 | 28.28 |
| CDY32453 | Canola | cytosol | 7.61 | 28.28 |
| CDY15228 | Canola | cytosol | 7.61 | 28.19 |
| CDX70178 | Canola | cytosol | 10.14 | 14.76 |
| CDY44175 | Canola | cytosol | 11.32 | 13.53 |
| CDY22896 | Canola | cytosol | 11.23 | 12.24 |
| CDX98809 | Canola | cytosol | 2.17 | 5.33 |
Protein Annotations
| MapMan:23.1.2.2 | Gene3D:3.40.50.300 | GO:A0A078HZ02 | UniProt:A0A078HZ02 | EnsemblPlants:CDY43117 | ProteinID:CDY43117 |
| ProteinID:CDY43117.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005525 |
| GO:GO:0016787 | GO:GO:0016817 | EnsemblPlantsGene:GSBRNA2T00076087001 | InterPro:G_AIG1 | InterPro:IPR006703 | InterPro:P-loop_NTPase |
| PFAM:PF04548 | PFAM:PF11886 | PFscan:PS51720 | PANTHER:PTHR10903 | PANTHER:PTHR10903:SF47 | SUPFAM:SSF52540 |
| TIGRFAMs:TIGR00993 | InterPro:TOC159_MAD | InterPro:Toc86_159 | UniParc:UPI0004EF04D6 | SEG:seg | : |
Description
BnaC05g36600DBnaC05g36600D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HZ02]
Coordinates
chrLK032545:-:239627..243991
Molecular Weight (calculated)
122049.0 Da
IEP (calculated)
4.871
GRAVY (calculated)
-0.629
Length
1104 amino acids
Sequence
(BLAST)
(BLAST)
0001: MIETSIPEFL FNMEEQKLAA DRVIDDQVEK IELVVSDVDS SHSEDEVFEE AIDSSKRESL QPDDLPSEEV KDSKVNGESH GEANLQHSTT GEAATGFVTS
0101: QMNGDEGEAG AENVNETSTL SFSENGTVFP EKKQVVAEVI EETTNDGIEE ENKEETVDVS GAQRNGERAS GERSFSDSIQ VASAGTPSPS EKSSSEENGE
0201: TEGRISREHD TVQNGGLGVE HTSQPNKEFE KQRGSRVNMS PEIKERKFEV ASSVSPTEST CNTAASPPAR PAGLGRDAPL LEPTPRVPHQ PRANGNESQN
0301: QSQQAEDPTT AETDEHDETR EKLQLIRVKF LRLSHRLGQT PHNVVVAQVL YRLGLAEQLR GRNGSRVGAF SFDRASSMAE QLEAAGQDPL DFSCTVMVLG
0401: KSGVGKSATI NSIFDEVKIC TDAFQMGTKR VQEVEGFVQG IKVRVIDTPG LLPSWSDQHK NEKMLKSVKA FIKKNPPDIV LYLDRLDMQS RDSGDTPLLR
0501: TITDVFGPSI WFNAIVGLTH AASAPPDGPN GTASSYDMFV TQRSHVIQQA IRQAAGDMRL MNPVSLVENH SACRTNRAGQ RVLPNGQVWK PHLLLLSFAS
0601: KILAEANALL KLQDNNTPGR PFVARSKAPP LPLLLSSFLQ SRPQAKLPEE QYGDEEDEDD LDESSGSDEE SEYDQLPPFK RLTKSEMARL SKSQKKQYLD
0701: EMEYREKLFM KRQMKEERKR RKMLKKFAAE IKEFANGHSE NVEEERSEPA SVPVPMPDLS LPASFDSDNP THRYRSLDSS NQWLVRPVLE TQGWDHDVGY
0801: EGVNAERLFV VKEKIPISFS GQVTKDKKDA NVQLEMASSV KHGEGRSTSL GFEMQNAGKE LAYTVRSDTR FNNFRKHKAA AGLSVTLLGD SVSAGLKVED
0901: KLIANKRFRM VMCGGAMTSR GDVAYGGSLE AQLRDKDYPL GRFLSTLGLS LMDWHGDLAI GGNIQSQVPI GRSSNLIARA NLNNRGAGQV SVRVNSSEQL
1001: QLAMVAFVPL FKKLLSYYSP QQMEKLLMGE DGRQEVYIVG LQEYEVSYVQ IVKELVEKGA QVKEVQKPQK ITARQGEDAL YPSWLSTDVG PTDDAGDDVM
1101: AWWQ
0101: QMNGDEGEAG AENVNETSTL SFSENGTVFP EKKQVVAEVI EETTNDGIEE ENKEETVDVS GAQRNGERAS GERSFSDSIQ VASAGTPSPS EKSSSEENGE
0201: TEGRISREHD TVQNGGLGVE HTSQPNKEFE KQRGSRVNMS PEIKERKFEV ASSVSPTEST CNTAASPPAR PAGLGRDAPL LEPTPRVPHQ PRANGNESQN
0301: QSQQAEDPTT AETDEHDETR EKLQLIRVKF LRLSHRLGQT PHNVVVAQVL YRLGLAEQLR GRNGSRVGAF SFDRASSMAE QLEAAGQDPL DFSCTVMVLG
0401: KSGVGKSATI NSIFDEVKIC TDAFQMGTKR VQEVEGFVQG IKVRVIDTPG LLPSWSDQHK NEKMLKSVKA FIKKNPPDIV LYLDRLDMQS RDSGDTPLLR
0501: TITDVFGPSI WFNAIVGLTH AASAPPDGPN GTASSYDMFV TQRSHVIQQA IRQAAGDMRL MNPVSLVENH SACRTNRAGQ RVLPNGQVWK PHLLLLSFAS
0601: KILAEANALL KLQDNNTPGR PFVARSKAPP LPLLLSSFLQ SRPQAKLPEE QYGDEEDEDD LDESSGSDEE SEYDQLPPFK RLTKSEMARL SKSQKKQYLD
0701: EMEYREKLFM KRQMKEERKR RKMLKKFAAE IKEFANGHSE NVEEERSEPA SVPVPMPDLS LPASFDSDNP THRYRSLDSS NQWLVRPVLE TQGWDHDVGY
0801: EGVNAERLFV VKEKIPISFS GQVTKDKKDA NVQLEMASSV KHGEGRSTSL GFEMQNAGKE LAYTVRSDTR FNNFRKHKAA AGLSVTLLGD SVSAGLKVED
0901: KLIANKRFRM VMCGGAMTSR GDVAYGGSLE AQLRDKDYPL GRFLSTLGLS LMDWHGDLAI GGNIQSQVPI GRSSNLIARA NLNNRGAGQV SVRVNSSEQL
1001: QLAMVAFVPL FKKLLSYYSP QQMEKLLMGE DGRQEVYIVG LQEYEVSYVQ IVKELVEKGA QVKEVQKPQK ITARQGEDAL YPSWLSTDVG PTDDAGDDVM
1101: AWWQ
0001: MGDGAEIVTR LYGDEKKLAE DGRISELVGS DEVKDNEEEV FEEAIGSQEG LKPESLKTDV LQEDFPLASN DEVCDLEETS RNERGVENLK VNYSEIGESH
0101: GEVNEQCITT KEADSDLVTL KMNDYDHGEV ADADISYGKM ASSLDVVENS EKATSNLATE DVNLENGNTH SSSENGVVSP DENKELVAEV ISVSACSVET
0201: GSNGIDDEKW EEEIDVSAGM VTEQRNGKTG AEFNSVKIVS GDKSLNDSIE VAAGTLSPLE KSSSEEKGET ESQNSNGGHD IQSNKEIVKQ QDSSVNIGPE
0301: IKESQHMERE SEVLSSVSPT ESRSDTAALP PARPAGLGRA APLLEPAPRV TQQPRVNGNV SHNQPQQAED STTAETDEHD ETREKLQFIR VKFLRLSHRL
0401: GQTPHNVVVA QVLYRLGLAE QLRGRNGSRV GAFSFDRASA MAEQLEAAAQ DPLDFSCTIM VLGKSGVGKS ATINSIFDEL KISTDAFQVG TKKVQDIEGF
0501: VQGIKVRVID TPGLLPSWSD QHKNEKILKS VRAFIKKSPP DIVLYLDRLD MQSRDSGDMP LLRTITDVFG PSIWFNAIVG LTHAASAPPD GPNGTASSYD
0601: MFVTQRSHVI QQAIRQAAGD MRLMNPVSLV ENHSACRTNR AGQRVLPNGQ VWKPHLLLLS FASKILAEAN ALLKLQDNIP GGQFATRSKA PPLPLLLSSL
0701: LQSRPQAKLP EQQYDDEDDE DDLDESSDSE EESEYDELPP FKRLTKAEMT KLSKSQKKEY LDEMEYREKL FMKRQMKEER KRRKLLKKFA AEIKDMPNGY
0801: SENVEEERSE PASVPVPMPD LSLPASFDSD NPTHRYRYLD TSNQWLVRPV LETHGWDHDI GYEGVNAERL FVVKDKIPVS FSGQVTKDKK DAHVQLELAS
0901: SVKHGEGRST SLGFDMQNAG KELAYTIRSE TRFNKFRKNK AAAGLSVTLL GDSVSAGLKV EDKLIANKRF RMVMSGGAMT SRGDVAYGGT LEAQFRDKDY
1001: PLGRFLSTLG LSVMDWHGDL AIGGNIQSQV PIGRSSNLIA RANLNNRGAG QVSIRVNSSE QLQLAVVALV PLFKKLLTYY SPEQMQYGH
0101: GEVNEQCITT KEADSDLVTL KMNDYDHGEV ADADISYGKM ASSLDVVENS EKATSNLATE DVNLENGNTH SSSENGVVSP DENKELVAEV ISVSACSVET
0201: GSNGIDDEKW EEEIDVSAGM VTEQRNGKTG AEFNSVKIVS GDKSLNDSIE VAAGTLSPLE KSSSEEKGET ESQNSNGGHD IQSNKEIVKQ QDSSVNIGPE
0301: IKESQHMERE SEVLSSVSPT ESRSDTAALP PARPAGLGRA APLLEPAPRV TQQPRVNGNV SHNQPQQAED STTAETDEHD ETREKLQFIR VKFLRLSHRL
0401: GQTPHNVVVA QVLYRLGLAE QLRGRNGSRV GAFSFDRASA MAEQLEAAAQ DPLDFSCTIM VLGKSGVGKS ATINSIFDEL KISTDAFQVG TKKVQDIEGF
0501: VQGIKVRVID TPGLLPSWSD QHKNEKILKS VRAFIKKSPP DIVLYLDRLD MQSRDSGDMP LLRTITDVFG PSIWFNAIVG LTHAASAPPD GPNGTASSYD
0601: MFVTQRSHVI QQAIRQAAGD MRLMNPVSLV ENHSACRTNR AGQRVLPNGQ VWKPHLLLLS FASKILAEAN ALLKLQDNIP GGQFATRSKA PPLPLLLSSL
0701: LQSRPQAKLP EQQYDDEDDE DDLDESSDSE EESEYDELPP FKRLTKAEMT KLSKSQKKEY LDEMEYREKL FMKRQMKEER KRRKLLKKFA AEIKDMPNGY
0801: SENVEEERSE PASVPVPMPD LSLPASFDSD NPTHRYRYLD TSNQWLVRPV LETHGWDHDI GYEGVNAERL FVVKDKIPVS FSGQVTKDKK DAHVQLELAS
0901: SVKHGEGRST SLGFDMQNAG KELAYTIRSE TRFNKFRKNK AAAGLSVTLL GDSVSAGLKV EDKLIANKRF RMVMSGGAMT SRGDVAYGGT LEAQFRDKDY
1001: PLGRFLSTLG LSVMDWHGDL AIGGNIQSQV PIGRSSNLIA RANLNNRGAG QVSIRVNSSE QLQLAVVALV PLFKKLLTYY SPEQMQYGH
Arabidopsis Description
TOC120Translocase of chloroplast 120, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LUS2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.