Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G16620.1 | OQU91582 | AT1G06950.1 | 15829604 |
| AT3G16620.1 | EER95112 | AT3G46740.1 | 15829604 |
| AT3G16620.1 | KXG36538 | AT3G46740.1 | 15829604 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d029846_P001 | Maize | plastid | 88.88 | 88.16 |
| Zm00001d047130_P001 | Maize | cytosol | 89.99 | 87.0 |
| HORVU1Hr1G053280.1 | Barley | mitochondrion | 61.17 | 86.8 |
| Os10t0548800-01 | Rice | cytosol, plasma membrane, plastid | 75.13 | 73.71 |
| TraesCS1B01G222000.1 | Wheat | cytosol | 73.71 | 67.88 |
| TraesCS1A01G208000.1 | Wheat | cytosol | 73.1 | 67.7 |
| TraesCS1D01G211300.1 | Wheat | cytosol, golgi | 73.31 | 67.5 |
| CDX70657 | Canola | cytosol | 16.58 | 56.55 |
| CDX70659 | Canola | cytosol | 5.66 | 51.85 |
| CDY66172 | Canola | cytosol | 51.26 | 51.42 |
| CDX70551 | Canola | cytosol | 18.1 | 49.72 |
| PGSC0003DMT400024781 | Potato | cytosol | 53.19 | 49.67 |
| CDX78660 | Canola | cytosol | 32.96 | 49.17 |
| Bra006330.1-P | Field mustard | cytosol | 32.76 | 48.87 |
| AT3G16620.1 | Thale cress | cytosol | 52.48 | 47.66 |
| CDY43117 | Canola | cytosol | 51.57 | 46.2 |
| Solyc11g043010.1.1 | Tomato | nucleus | 33.57 | 45.6 |
| KRH24252 | Soybean | mitochondrion | 55.41 | 45.25 |
| Bra022170.1-P | Field mustard | nucleus | 48.53 | 45.16 |
| CDX92086 | Canola | cytosol, endoplasmic reticulum, vacuole | 48.53 | 45.16 |
| CDX70550 | Canola | cytosol | 12.74 | 44.52 |
| AT2G16640.3 | Thale cress | cytosol | 53.89 | 44.2 |
| CDX70641 | Canola | cytosol | 35.69 | 44.02 |
| VIT_03s0038g02070.t01 | Wine grape | nucleus | 55.92 | 43.37 |
| CDX92087 | Canola | cytosol | 51.67 | 43.23 |
| GSMUA_Achr8P19440_001 | Banana | cytosol | 49.95 | 41.13 |
| KRH29257 | Soybean | endoplasmic reticulum | 55.51 | 40.16 |
| PGSC0003DMT400004034 | Potato | cytosol | 53.89 | 38.96 |
| Solyc01g111240.2.1 | Tomato | nucleus | 52.48 | 38.7 |
| CDX70658 | Canola | cytosol | 4.85 | 37.5 |
| EES15811 | Sorghum | mitochondrion | 29.22 | 36.77 |
| GSMUA_Achr11P... | Banana | cytosol | 52.07 | 36.52 |
| OQU90674 | Sorghum | nucleus | 31.45 | 33.59 |
| OQU77419 | Sorghum | nucleus | 41.76 | 30.94 |
| KXG39799 | Sorghum | cytosol | 9.5 | 28.83 |
Protein Annotations
| MapMan:23.1.2.2 | Gene3D:3.40.50.300 | EntrezGene:8058121 | UniProt:C5WTD6 | EnsemblPlants:EER91974 | ProteinID:EER91974 |
| ProteinID:EER91974.1 | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005525 |
| GO:GO:0016787 | GO:GO:0016817 | InterPro:G_AIG1 | InterPro:IPR006703 | InterPro:P-loop_NTPase | PFAM:PF04548 |
| PFAM:PF11886 | PFscan:PS51720 | PANTHER:PTHR10903 | PANTHER:PTHR10903:SF47 | EnsemblPlantsGene:SORBI_3001G305900 | SUPFAM:SSF52540 |
| unigene:Sbi.20547 | TIGRFAMs:TIGR00993 | InterPro:TOC159_MAD | InterPro:Toc86_159 | UniParc:UPI0001A82532 | RefSeq:XP_002464976.1 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:+:58998698..59003294
Molecular Weight (calculated)
107073.0 Da
IEP (calculated)
4.770
GRAVY (calculated)
-0.492
Length
989 amino acids
Sequence
(BLAST)
(BLAST)
001: MENENGSVGR PEDRAGENGG VAEEEESAVK AATAADEGDC DVVVEGVDEG DVPPGAVAAQ DGGGDEVGEE NRASGEGALE SAGVSGDHQP VVTPNTRVVL
101: ETGQLAADKW DEDETPRVVD VEEMFADDVN QEQVAAQSGS EYEDVKGGMY QSKNQPGKST EEIASSHSRP KSVTHSAAES AVAIEELDDS GFSDDENTTT
201: SAPPAKSSAG SSTPAQSSSG ASARSTNGPS LLSRPAGLGS SSSLSQPPVR SVQQVRANRP SAVDRGTQEA TESAEDDRDE NDEIHEKLQM IRVKFLRLAD
301: RFGQTSHNMV VSQVLYRLGL AEQLRRTTAN GTFSIDRARE MAERLEAAGN EPLDFSCTIL VLGKTGVGKS ATINSIFDDT RLDTNAFDSS TRKVQEVVGM
401: VEGIKVKVID TPGLSCSSLE QHHNQKVLNS VKRIISKNPP DIVLYFDRLD MQSRDNGDVP LLQTITKVFG ASVWFNAIVV LTHAASAPPD GQNGIPLSYE
501: MFVTQRSHVV QQAIRQAAGD VRLMNPVSLV ENHSACRTNR AGQRVLPNGQ VWKPQLLLLC FASKVLAEAN VLLKLQDSPM SKLSRTRIPP LPFLLSSLLQ
601: SRAPLKLPEE QFGGDDDDLE DDSADDSDSD DGSDYDDLPP FKRLTKAQLA KLNKEQRKAY LEELDYREKL FYRKQLKEES KRRKLMKKMA AEASARANDF
701: GNSNLEDDSN TPTNVSVPMP DMVLPSSFDS GYPSHRYRFL DTPSEWLVRP VLETQGWDHD VGYEGLNVER LFAVKGKVPL SVSGQLTKDK KDCSLQMEAA
801: SSIKHAEGKT TSLGLDLQSV GKDMAYTIRG ESRFKNFRRN NTAAGISATL LGDSVSAGVK IEDKLIVNKQ LRVLISGGAM SGRGDVAYGG RLEATMRDKD
901: YPIGRMLSTI ALSVVDWHGD LAIGCNIQSQ IPAGRASNLV GHANLSNKGT GQFGIRLNSS EHLEIALVAL VPIFQNIMKL LQNYYSESG
101: ETGQLAADKW DEDETPRVVD VEEMFADDVN QEQVAAQSGS EYEDVKGGMY QSKNQPGKST EEIASSHSRP KSVTHSAAES AVAIEELDDS GFSDDENTTT
201: SAPPAKSSAG SSTPAQSSSG ASARSTNGPS LLSRPAGLGS SSSLSQPPVR SVQQVRANRP SAVDRGTQEA TESAEDDRDE NDEIHEKLQM IRVKFLRLAD
301: RFGQTSHNMV VSQVLYRLGL AEQLRRTTAN GTFSIDRARE MAERLEAAGN EPLDFSCTIL VLGKTGVGKS ATINSIFDDT RLDTNAFDSS TRKVQEVVGM
401: VEGIKVKVID TPGLSCSSLE QHHNQKVLNS VKRIISKNPP DIVLYFDRLD MQSRDNGDVP LLQTITKVFG ASVWFNAIVV LTHAASAPPD GQNGIPLSYE
501: MFVTQRSHVV QQAIRQAAGD VRLMNPVSLV ENHSACRTNR AGQRVLPNGQ VWKPQLLLLC FASKVLAEAN VLLKLQDSPM SKLSRTRIPP LPFLLSSLLQ
601: SRAPLKLPEE QFGGDDDDLE DDSADDSDSD DGSDYDDLPP FKRLTKAQLA KLNKEQRKAY LEELDYREKL FYRKQLKEES KRRKLMKKMA AEASARANDF
701: GNSNLEDDSN TPTNVSVPMP DMVLPSSFDS GYPSHRYRFL DTPSEWLVRP VLETQGWDHD VGYEGLNVER LFAVKGKVPL SVSGQLTKDK KDCSLQMEAA
801: SSIKHAEGKT TSLGLDLQSV GKDMAYTIRG ESRFKNFRRN NTAAGISATL LGDSVSAGVK IEDKLIVNKQ LRVLISGGAM SGRGDVAYGG RLEATMRDKD
901: YPIGRMLSTI ALSVVDWHGD LAIGCNIQSQ IPAGRASNLV GHANLSNKGT GQFGIRLNSS EHLEIALVAL VPIFQNIMKL LQNYYSESG
0001: MGDGTEFVVR SDREDKKLAE DRISDEQVVK NELVRSDEVR DDNEDEVFEE AIGSENDEQE EEEDPKRELF ESDDLPLVET LKSSMVEHEV EDFEEAVGDL
0101: DETSSNEGGV KDFTAVGESH GAGEAEFDVL ATKMNGDKGE GGGGGSYDKV ESSLDVVDTT ENATSTNTNG SNLAAEHVGI ENGKTHSFLG NGIASPKNKE
0201: VVAEVIPKDD GIEEPWNDGI EVDNWEERVD GIQTEQEVEE GEGTTENQFE KRTEEEVVEG EGTSKNLFEK QTEQDVVEGE GTSKDLFENG SVCMDSESEA
0301: ERNGETGAAY TSNIVTNASG DNEVSSAVTS SPLEESSSGE KGETEGDSTC LKPEQHLASS PHSYPESTEV HSNSGSPGVT SREHKPVQSA NGGHDVQSPQ
0401: PNKELEKQQS SRVHVDPEIT ENSHVETEPE VVSSVSPTES RSNPAALPPA RPAGLGRASP LLEPASRAPQ QSRVNGNGSH NQFQQAEDST TTEADEHDET
0501: REKLQLIRVK FLRLAHRLGQ TPHNVVVAQV LYRLGLAEQL RGRNGSRVGA FSFDRASAMA EQLEAAGQDP LDFSCTIMVL GKSGVGKSAT INSIFDEVKF
0601: CTDAFQMGTK RVQDVEGLVQ GIKVRVIDTP GLLPSWSDQA KNEKILNSVK AFIKKNPPDI VLYLDRLDMQ SRDSGDMPLL RTISDVFGPS IWFNAIVGLT
0701: HAASVPPDGP NGTASSYDMF VTQRSHVIQQ AIRQAAGDMR LMNPVSLVEN HSACRTNRAG QRVLPNGQVW KPHLLLLSFA SKILAEANAL LKLQDNIPGR
0801: PFAARSKAPP LPFLLSSLLQ SRPQPKLPEQ QYGDEEDEDD LEESSDSDEE SEYDQLPPFK SLTKAQMATL SKSQKKQYLD EMEYREKLLM KKQMKEERKR
0901: RKMFKKFAAE IKDLPDGYSE NVEEESGGPA SVPVPMPDLS LPASFDSDNP THRYRYLDSS NQWLVRPVLE THGWDHDIGY EGVNAERLFV VKEKIPISVS
1001: GQVTKDKKDA NVQLEMASSV KHGEGKSTSL GFDMQTVGKE LAYTLRSETR FNNFRRNKAA AGLSVTHLGD SVSAGLKVED KFIASKWFRI VMSGGAMTSR
1101: GDFAYGGTLE AQLRDKDYPL GRFLTTLGLS VMDWHGDLAI GGNIQSQVPI GRSSNLIARA NLNNRGAGQV SVRVNSSEQL QLAMVAIVPL FKKLLSYYYP
1201: QTQYGQ
0101: DETSSNEGGV KDFTAVGESH GAGEAEFDVL ATKMNGDKGE GGGGGSYDKV ESSLDVVDTT ENATSTNTNG SNLAAEHVGI ENGKTHSFLG NGIASPKNKE
0201: VVAEVIPKDD GIEEPWNDGI EVDNWEERVD GIQTEQEVEE GEGTTENQFE KRTEEEVVEG EGTSKNLFEK QTEQDVVEGE GTSKDLFENG SVCMDSESEA
0301: ERNGETGAAY TSNIVTNASG DNEVSSAVTS SPLEESSSGE KGETEGDSTC LKPEQHLASS PHSYPESTEV HSNSGSPGVT SREHKPVQSA NGGHDVQSPQ
0401: PNKELEKQQS SRVHVDPEIT ENSHVETEPE VVSSVSPTES RSNPAALPPA RPAGLGRASP LLEPASRAPQ QSRVNGNGSH NQFQQAEDST TTEADEHDET
0501: REKLQLIRVK FLRLAHRLGQ TPHNVVVAQV LYRLGLAEQL RGRNGSRVGA FSFDRASAMA EQLEAAGQDP LDFSCTIMVL GKSGVGKSAT INSIFDEVKF
0601: CTDAFQMGTK RVQDVEGLVQ GIKVRVIDTP GLLPSWSDQA KNEKILNSVK AFIKKNPPDI VLYLDRLDMQ SRDSGDMPLL RTISDVFGPS IWFNAIVGLT
0701: HAASVPPDGP NGTASSYDMF VTQRSHVIQQ AIRQAAGDMR LMNPVSLVEN HSACRTNRAG QRVLPNGQVW KPHLLLLSFA SKILAEANAL LKLQDNIPGR
0801: PFAARSKAPP LPFLLSSLLQ SRPQPKLPEQ QYGDEEDEDD LEESSDSDEE SEYDQLPPFK SLTKAQMATL SKSQKKQYLD EMEYREKLLM KKQMKEERKR
0901: RKMFKKFAAE IKDLPDGYSE NVEEESGGPA SVPVPMPDLS LPASFDSDNP THRYRYLDSS NQWLVRPVLE THGWDHDIGY EGVNAERLFV VKEKIPISVS
1001: GQVTKDKKDA NVQLEMASSV KHGEGKSTSL GFDMQTVGKE LAYTLRSETR FNNFRRNKAA AGLSVTHLGD SVSAGLKVED KFIASKWFRI VMSGGAMTSR
1101: GDFAYGGTLE AQLRDKDYPL GRFLTTLGLS VMDWHGDLAI GGNIQSQVPI GRSSNLIARA NLNNRGAGQV SVRVNSSEQL QLAMVAIVPL FKKLLSYYYP
1201: QTQYGQ
Arabidopsis Description
TOC132Translocase of chloroplast 132, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SLF3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.