Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d012893_P002 | Maize | cytosol, plastid | 86.18 | 70.12 |
| Zm00001d034755_P001 | Maize | cytosol | 85.53 | 68.63 |
| HORVU5Hr1G117690.19 | Barley | plastid | 69.55 | 55.14 |
| TraesCS4A01G358400.1 | Wheat | plastid | 70.09 | 54.45 |
| TraesCS5D01G514500.1 | Wheat | cytosol, plastid | 70.09 | 53.68 |
| CDX97269 | Canola | cytosol | 3.78 | 53.03 |
| TraesCS5B01G514000.1 | Wheat | cytosol | 69.76 | 52.99 |
| Os03t0835100-00 | Rice | cytosol, plastid | 68.25 | 52.4 |
| CDY50376 | Canola | cytosol | 35.64 | 47.35 |
| KRH30746 | Soybean | cytosol | 6.26 | 44.27 |
| CDX97270 | Canola | cytosol | 20.73 | 43.74 |
| PGSC0003DMT400029640 | Potato | cytosol | 42.55 | 39.64 |
| CDX91288 | Canola | cytosol | 32.51 | 38.3 |
| Bra018546.1-P | Field mustard | mitochondrion | 35.64 | 37.0 |
| Solyc01g080780.2.1 | Tomato | nucleus | 39.31 | 33.03 |
| KRH43000 | Soybean | nucleus | 42.22 | 33.0 |
| EES15811 | Sorghum | mitochondrion | 27.75 | 32.7 |
| KRH59116 | Soybean | nucleus | 42.76 | 31.94 |
| OQU77419 | Sorghum | nucleus | 46.0 | 31.91 |
| EER91974 | Sorghum | cytosol | 33.59 | 31.45 |
| VIT_05s0020g01290.t01 | Wine grape | cytosol | 38.98 | 27.96 |
| Solyc09g074940.1.1 | Tomato | plastid | 42.22 | 27.87 |
| VIT_07s0005g00180.t01 | Wine grape | plastid | 43.84 | 27.71 |
| PGSC0003DMT400016119 | Potato | cytosol, nucleus, plastid | 40.28 | 27.41 |
| KXG39799 | Sorghum | cytosol | 9.4 | 26.69 |
| AT4G02510.4 | Thale cress | nucleus | 43.3 | 26.68 |
| Bra036261.1-P | Field mustard | nucleus | 42.98 | 25.61 |
| KRH02257 | Soybean | cytosol | 18.9 | 20.35 |
| Bra033515.1-P | Field mustard | cytosol | 17.39 | 14.61 |
| AT4G15810.1 | Thale cress | cytosol | 13.17 | 13.29 |
| CDY44175 | Canola | cytosol | 12.85 | 12.88 |
| CDY22896 | Canola | cytosol | 13.17 | 12.04 |
Protein Annotations
| MapMan:23.1.2.2 | Gene3D:3.40.50.300 | UniProt:A0A1Z5S416 | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0016787 | GO:GO:0016817 | InterPro:G_AIG1 |
| InterPro:IPR006703 | EnsemblPlants:OQU90674 | ProteinID:OQU90674 | ProteinID:OQU90674.1 | InterPro:P-loop_NTPase | PFAM:PF04548 |
| PFAM:PF11886 | PFscan:PS51720 | PANTHER:PTHR10903 | PANTHER:PTHR10903:SF64 | EnsemblPlantsGene:SORBI_3001G023400 | SUPFAM:SSF52540 |
| TIGRFAMs:TIGR00993 | InterPro:TOC159_MAD | InterPro:Toc86_159 | UniParc:UPI000B8B9C34 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr1:-:1868784..1871564
Molecular Weight (calculated)
102857.0 Da
IEP (calculated)
4.801
GRAVY (calculated)
-0.558
Length
926 amino acids
Sequence
(BLAST)
(BLAST)
001: MLDREVAESL PISNATEGED AGAELCSDDS DAKGSTAKLD ASPEYATTGE VTSDGVQVCD NVDDLGSTEV GGHNKEDEEA DGYHDASNDL KSIPISSSDD
101: AVEFIAKELE DNVPTSRGAR FGVEDSDDAE INGDDEYEEE MNVKEAELFD YAALIELLRA ASSSPEQGKA KVFPVESSEP RHLPPMVASN AANARANVAS
201: APVPEVTADP EKEMTDEEKK IYRKVDMARI KYMRLVHRLG YDTNHQVPVQ VLYRLSLVEG FRRVRMTNHS SEIEDAWKRA LQHEAEGTED LEFSCNVLVL
301: GKTGVGKSAT INSIFGEDKS KTNAFLPTTS SVKEITGVVD GVKFRVIDTP GLGISAKDDK SNRKVLKAVK KYMKRCPPDI ILYVDRLDTQ REEANSLSLL
401: RGITSVLGLS IWSRTIITLT HSGADPPEGP NGSAVNYDMI VTHRTHAVQQ SIRQITNDPR IQNAVALVEN HHECRRNAEG EKVLPDGLIW RRLLLLLCYS
501: LKMIAEIDSL STRRASSTSF LGRFFQVPPI PYFLSSLLQS REHPRRSNEH NVGSVDSDFD LDELLNGDQE DEEDDYDQLP PFKPLSKSQV AKLSKELQKL
601: YFDEYDYRTK LLQKKQLKEQ LERFKEMKKK EGDDNDVPSD DDHPDDGYDT DRYPTPEWTL PSSFDSDDPV YRYRCLVSTP NLLVRAVNNP DGWDHDYGFD
701: GVSVQHSHDI ANKYPASLWV QINKDKREFT IHLDSSMSVK HGDYASSLAG FDIQTMMNQL AYTLRGETKF KNFKKNITTG GLSMTFLGNT MVAGAKLEDK
801: LLVGNRLTLS GNTGAVSMRG DAAYGVNMEA TLREKSYPLG QGLATLGASL VKWRKEWTMA ANLDSQVSVG RSSNMAVHVD VNNKLTGRVS IKANTSEQLN
901: IALFGTCSVI MYLWNKMHPG ADPNAE
101: AVEFIAKELE DNVPTSRGAR FGVEDSDDAE INGDDEYEEE MNVKEAELFD YAALIELLRA ASSSPEQGKA KVFPVESSEP RHLPPMVASN AANARANVAS
201: APVPEVTADP EKEMTDEEKK IYRKVDMARI KYMRLVHRLG YDTNHQVPVQ VLYRLSLVEG FRRVRMTNHS SEIEDAWKRA LQHEAEGTED LEFSCNVLVL
301: GKTGVGKSAT INSIFGEDKS KTNAFLPTTS SVKEITGVVD GVKFRVIDTP GLGISAKDDK SNRKVLKAVK KYMKRCPPDI ILYVDRLDTQ REEANSLSLL
401: RGITSVLGLS IWSRTIITLT HSGADPPEGP NGSAVNYDMI VTHRTHAVQQ SIRQITNDPR IQNAVALVEN HHECRRNAEG EKVLPDGLIW RRLLLLLCYS
501: LKMIAEIDSL STRRASSTSF LGRFFQVPPI PYFLSSLLQS REHPRRSNEH NVGSVDSDFD LDELLNGDQE DEEDDYDQLP PFKPLSKSQV AKLSKELQKL
601: YFDEYDYRTK LLQKKQLKEQ LERFKEMKKK EGDDNDVPSD DDHPDDGYDT DRYPTPEWTL PSSFDSDDPV YRYRCLVSTP NLLVRAVNNP DGWDHDYGFD
701: GVSVQHSHDI ANKYPASLWV QINKDKREFT IHLDSSMSVK HGDYASSLAG FDIQTMMNQL AYTLRGETKF KNFKKNITTG GLSMTFLGNT MVAGAKLEDK
801: LLVGNRLTLS GNTGAVSMRG DAAYGVNMEA TLREKSYPLG QGLATLGASL VKWRKEWTMA ANLDSQVSVG RSSNMAVHVD VNNKLTGRVS IKANTSEQLN
901: IALFGTCSVI MYLWNKMHPG ADPNAE
0001: MDSKSVTPEP TNPFYASSGQ SGKTYASVVA AAAAAAADKE DGGAVSSAKE LDSSSEAVSG NSDKVGADDL SDSEKEKPNL VGDGKVSDEV DGSLKEDSTT
0101: PEATPKPEVV SGETIGVDDV SSLSPKPEAV SDGVGVVEEN KKVKEDVEDI KDDGESKIEN GSVDVDVKQA STDGESESKV KDVEEEDVGT KKDDEGESEL
0201: GGKVDVDDKS DNVIEEEGVE LTDKGDVIVN SSPVESVHVD VAKPGVVVVG DAEGSEELKI NADAETLEVA NKFDQIGDDD SGEFEPVSDK AIEEVEEKFT
0301: SESDSIADSS KLESVDTSAV EPEVVAAESG SEPKDVEKAN GLEKGMTYAE VIKAASAVAD NGTKEEESVL GGIVDDAEEG VKLNNKGDFV VDSSAIEAVN
0401: VDVAKPGVVV VGDVEVSEVL ETDGNIPDVH NKFDPIGQGE GGEVELESDK ATEEGGGKLV SEGDSMVDSS VVDSVDADIN VAEPGVVVVG AAKEAVIKED
0501: DKDDEVDKTI SNIEEPDDLT AAYDGNFELA VKEISEAAKV EPDEPKVGVE VEELPVSESL KVGSVDAEED SIPAAESQFE VRKVVEGDSA EEDENKLPVE
0601: DIVSSREFSF GGKEVDQEPS GEGVTRVDGS ESEEETEEMI FGSSEAAKQF LAELEKASSG IEAHSDEANI SNNMSDRIDG QIVTDSDEDV DTEDEGEEKM
0701: FDTAALAALL KAATGGGSSE GGNFTITSQD GTKLFSMDRP AGLSSSLRPL KPAAAPRANR SNIFSNSNVT MADETEINLS EEEKQKLEKL QSLRVKFLRL
0801: LQRLGHSAED SIAAQVLYRL ALLAGRQAGQ LFSLDAAKKK AVESEAEGNE ELIFSLNILV LGKAGVGKSA TINSILGNQI ASIDAFGLST TSVREISGTV
0901: NGVKITFIDT PGLKSAAMDQ STNAKMLSSV KKVMKKCPPD IVLYVDRLDT QTRDLNNLPL LRTITASLGT SIWKNAIVTL THAASAPPDG PSGTPLSYDV
1001: FVAQCSHIVQ QSIGQAVGDL RLMNPSLMNP VSLVENHPLC RKNREGVKVL PNGQTWRSQL LLLCYSLKVL SETNSLLRPQ EPLDHRKVFG FRVRSPPLPY
1101: LLSWLLQSRA HPKLPGDQGG DSVDSDIEID DVSDSEQEDG EDDEYDQLPP FKPLRKTQLA KLSNEQRKAY FEEYDYRVKL LQKKQWREEL KRMKEMKKNG
1201: KKLGESEFGY PGEEDDPENG APAAVPVPLP DMVLPPSFDS DNSAYRYRYL EPTSQLLTRP VLDTHGWDHD CGYDGVNAEH SLALASRFPA TATVQVTKDK
1301: KEFNIHLDSS VSAKHGENGS TMAGFDIQNV GKQLAYVVRG ETKFKNLRKN KTTVGGSVTF LGENIATGVK LEDQIALGKR LVLVGSTGTM RSQGDSAYGA
1401: NLEVRLREAD FPIGQDQSSF GLSLVKWRGD LALGANLQSQ VSVGRNSKIA LRAGLNNKMS GQITVRTSSS DQLQIALTAI LPIAMSIYKS IRPEATNDKY
1501: SMY
0101: PEATPKPEVV SGETIGVDDV SSLSPKPEAV SDGVGVVEEN KKVKEDVEDI KDDGESKIEN GSVDVDVKQA STDGESESKV KDVEEEDVGT KKDDEGESEL
0201: GGKVDVDDKS DNVIEEEGVE LTDKGDVIVN SSPVESVHVD VAKPGVVVVG DAEGSEELKI NADAETLEVA NKFDQIGDDD SGEFEPVSDK AIEEVEEKFT
0301: SESDSIADSS KLESVDTSAV EPEVVAAESG SEPKDVEKAN GLEKGMTYAE VIKAASAVAD NGTKEEESVL GGIVDDAEEG VKLNNKGDFV VDSSAIEAVN
0401: VDVAKPGVVV VGDVEVSEVL ETDGNIPDVH NKFDPIGQGE GGEVELESDK ATEEGGGKLV SEGDSMVDSS VVDSVDADIN VAEPGVVVVG AAKEAVIKED
0501: DKDDEVDKTI SNIEEPDDLT AAYDGNFELA VKEISEAAKV EPDEPKVGVE VEELPVSESL KVGSVDAEED SIPAAESQFE VRKVVEGDSA EEDENKLPVE
0601: DIVSSREFSF GGKEVDQEPS GEGVTRVDGS ESEEETEEMI FGSSEAAKQF LAELEKASSG IEAHSDEANI SNNMSDRIDG QIVTDSDEDV DTEDEGEEKM
0701: FDTAALAALL KAATGGGSSE GGNFTITSQD GTKLFSMDRP AGLSSSLRPL KPAAAPRANR SNIFSNSNVT MADETEINLS EEEKQKLEKL QSLRVKFLRL
0801: LQRLGHSAED SIAAQVLYRL ALLAGRQAGQ LFSLDAAKKK AVESEAEGNE ELIFSLNILV LGKAGVGKSA TINSILGNQI ASIDAFGLST TSVREISGTV
0901: NGVKITFIDT PGLKSAAMDQ STNAKMLSSV KKVMKKCPPD IVLYVDRLDT QTRDLNNLPL LRTITASLGT SIWKNAIVTL THAASAPPDG PSGTPLSYDV
1001: FVAQCSHIVQ QSIGQAVGDL RLMNPSLMNP VSLVENHPLC RKNREGVKVL PNGQTWRSQL LLLCYSLKVL SETNSLLRPQ EPLDHRKVFG FRVRSPPLPY
1101: LLSWLLQSRA HPKLPGDQGG DSVDSDIEID DVSDSEQEDG EDDEYDQLPP FKPLRKTQLA KLSNEQRKAY FEEYDYRVKL LQKKQWREEL KRMKEMKKNG
1201: KKLGESEFGY PGEEDDPENG APAAVPVPLP DMVLPPSFDS DNSAYRYRYL EPTSQLLTRP VLDTHGWDHD CGYDGVNAEH SLALASRFPA TATVQVTKDK
1301: KEFNIHLDSS VSAKHGENGS TMAGFDIQNV GKQLAYVVRG ETKFKNLRKN KTTVGGSVTF LGENIATGVK LEDQIALGKR LVLVGSTGTM RSQGDSAYGA
1401: NLEVRLREAD FPIGQDQSSF GLSLVKWRGD LALGANLQSQ VSVGRNSKIA LRAGLNNKMS GQITVRTSSS DQLQIALTAI LPIAMSIYKS IRPEATNDKY
1501: SMY
Arabidopsis Description
TOC159Translocase of chloroplast 159, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O81283]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.