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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • mitochondrion 2
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY50376 Canola cytosol 42.71 92.11
Bra036261.1-P Field mustard nucleus 71.86 69.5
KRH30746 Soybean cytosol 5.85 67.18
PGSC0003DMT400029640 Potato cytosol 42.38 64.08
KRH43000 Soybean nucleus 42.78 54.26
GSMUA_Achr9P31010_001 Banana cytosol 35.4 53.79
KRH59116 Soybean nucleus 44.24 53.63
Solyc09g074940.1.1 Tomato plastid 46.51 49.82
GSMUA_Achr9P31000_001 Banana cytosol 35.73 49.18
VIT_07s0005g00180.t01 Wine grape plastid 47.57 48.81
Zm00001d010852_P002 Maize plastid 38.66 48.14
Os05t0151400-01 Rice plastid 40.32 46.4
Zm00001d035812_P003 Maize plastid 40.05 46.27
OQU77419 Sorghum nucleus 40.12 45.17
OQU90674 Sorghum nucleus 26.68 43.3
HORVU1Hr1G021840.9 Barley nucleus 40.72 42.92
TraesCS1A01G093900.3 Wheat cytosol, nucleus, plastid 40.65 42.91
TraesCS1D01G102500.3 Wheat cytosol, nucleus, plastid 40.59 42.81
TraesCS1B01G122000.4 Wheat cytosol, nucleus, plastid 40.45 42.37
AT3G16620.1 Thale cress cytosol 27.48 37.92
GSMUA_Achr6P20360_001 Banana cytosol 27.94 37.14
Os03t0835100-00 Rice cytosol, plastid 29.41 36.65
Zm00001d012893_P002 Maize cytosol, plastid 27.54 36.38
HORVU5Hr1G117690.19 Barley plastid 28.01 36.04
TraesCS4A01G358400.1 Wheat plastid 28.48 35.91
Zm00001d034755_P001 Maize cytosol 27.41 35.7
AT5G20300.4 Thale cress cytosol 18.76 35.56
TraesCS5D01G514500.1 Wheat cytosol, plastid 28.48 35.4
AT2G16640.3 Thale cress cytosol 28.34 35.32
TraesCS5B01G514000.1 Wheat cytosol 28.41 35.03
AT5G05000.3 Thale cress cytosol 5.85 28.11
AT1G02280.1 Thale cress cytosol 5.52 27.95
AT4G15810.1 Thale cress cytosol 10.51 17.21
Os01t0356800-00 Rice plastid 20.29 5.71
Protein Annotations
MapMan:23.1.2.2Gene3D:3.40.50.300EntrezGene:827934ProteinID:AAC19285.1ProteinID:AAC78265.2ProteinID:AEE82182.1
EMBL:AF412063EMBL:AK222164ProteinID:ANM66758.1ProteinID:ANM66759.1ProteinID:ANM66760.1ArrayExpress:AT4G02510
EnsemblPlantsGene:AT4G02510RefSeq:AT4G02510TAIR:AT4G02510RefSeq:AT4G02510-TAIR-GEnsemblPlants:AT4G02510.4EMBL:AY133653
Unigene:At.24962ProteinID:CAB80744.1ncoils:CoilGO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0003924GO:GO:0004871GO:GO:0004888GO:GO:0004930GO:GO:0005488GO:GO:0005515
GO:GO:0005525GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005829
GO:GO:0006810GO:GO:0007154GO:GO:0007165GO:GO:0007186GO:GO:0008150GO:GO:0009507
GO:GO:0009527GO:GO:0009536GO:GO:0009707GO:GO:0009941GO:GO:0009987GO:GO:0015031
GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016817GO:GO:0038023GO:GO:0043024
GO:GO:0045036GO:GO:0045037GO:GO:0046872GO:GO:0051087GO:GO:0061927InterPro:G_AIG1
InterPro:IPR006703RefSeq:NP_001319848.1RefSeq:NP_001328635.1RefSeq:NP_001328636.1RefSeq:NP_567242.2UniProt:O81283
InterPro:P-loop_NTPasePFAM:PF04548PFAM:PF11886PFscan:PS51720PANTHER:PTHR10903PANTHER:PTHR10903:SF39
SUPFAM:SSF52540TIGRFAMs:TIGR00993Symbol:TOC159InterPro:TOC159_MADInterPro:Toc86_159UniParc:UPI00000A553E
SEG:seg:::::
Description
TOC159Translocase of chloroplast 159, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O81283]
Coordinates
chr4:+:1104566..1111784
Molecular Weight (calculated)
160827.0 Da
IEP (calculated)
4.167
GRAVY (calculated)
-0.479
Length
1503 amino acids
Sequence
(BLAST)
0001: MDSKSVTPEP TNPFYASSGQ SGKTYASVVA AAAAAAADKE DGGAVSSAKE LDSSSEAVSG NSDKVGADDL SDSEKEKPNL VGDGKVSDEV DGSLKEDSTT
0101: PEATPKPEVV SGETIGVDDV SSLSPKPEAV SDGVGVVEEN KKVKEDVEDI KDDGESKIEN GSVDVDVKQA STDGESESKV KDVEEEDVGT KKDDEGESEL
0201: GGKVDVDDKS DNVIEEEGVE LTDKGDVIVN SSPVESVHVD VAKPGVVVVG DAEGSEELKI NADAETLEVA NKFDQIGDDD SGEFEPVSDK AIEEVEEKFT
0301: SESDSIADSS KLESVDTSAV EPEVVAAESG SEPKDVEKAN GLEKGMTYAE VIKAASAVAD NGTKEEESVL GGIVDDAEEG VKLNNKGDFV VDSSAIEAVN
0401: VDVAKPGVVV VGDVEVSEVL ETDGNIPDVH NKFDPIGQGE GGEVELESDK ATEEGGGKLV SEGDSMVDSS VVDSVDADIN VAEPGVVVVG AAKEAVIKED
0501: DKDDEVDKTI SNIEEPDDLT AAYDGNFELA VKEISEAAKV EPDEPKVGVE VEELPVSESL KVGSVDAEED SIPAAESQFE VRKVVEGDSA EEDENKLPVE
0601: DIVSSREFSF GGKEVDQEPS GEGVTRVDGS ESEEETEEMI FGSSEAAKQF LAELEKASSG IEAHSDEANI SNNMSDRIDG QIVTDSDEDV DTEDEGEEKM
0701: FDTAALAALL KAATGGGSSE GGNFTITSQD GTKLFSMDRP AGLSSSLRPL KPAAAPRANR SNIFSNSNVT MADETEINLS EEEKQKLEKL QSLRVKFLRL
0801: LQRLGHSAED SIAAQVLYRL ALLAGRQAGQ LFSLDAAKKK AVESEAEGNE ELIFSLNILV LGKAGVGKSA TINSILGNQI ASIDAFGLST TSVREISGTV
0901: NGVKITFIDT PGLKSAAMDQ STNAKMLSSV KKVMKKCPPD IVLYVDRLDT QTRDLNNLPL LRTITASLGT SIWKNAIVTL THAASAPPDG PSGTPLSYDV
1001: FVAQCSHIVQ QSIGQAVGDL RLMNPSLMNP VSLVENHPLC RKNREGVKVL PNGQTWRSQL LLLCYSLKVL SETNSLLRPQ EPLDHRKVFG FRVRSPPLPY
1101: LLSWLLQSRA HPKLPGDQGG DSVDSDIEID DVSDSEQEDG EDDEYDQLPP FKPLRKTQLA KLSNEQRKAY FEEYDYRVKL LQKKQWREEL KRMKEMKKNG
1201: KKLGESEFGY PGEEDDPENG APAAVPVPLP DMVLPPSFDS DNSAYRYRYL EPTSQLLTRP VLDTHGWDHD CGYDGVNAEH SLALASRFPA TATVQVTKDK
1301: KEFNIHLDSS VSAKHGENGS TMAGFDIQNV GKQLAYVVRG ETKFKNLRKN KTTVGGSVTF LGENIATGVK LEDQIALGKR LVLVGSTGTM RSQGDSAYGA
1401: NLEVRLREAD FPIGQDQSSF GLSLVKWRGD LALGANLQSQ VSVGRNSKIA LRAGLNNKMS GQITVRTSSS DQLQIALTAI LPIAMSIYKS IRPEATNDKY
1501: SMY
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.