Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- cytosol 3
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX97269 | Canola | cytosol | 4.16 | 71.21 |
| GSMUA_Achr9P31010_001 | Banana | cytosol | 44.3 | 50.66 |
| CDY50376 | Canola | cytosol | 30.95 | 50.22 |
| GSMUA_Achr9P31000_001 | Banana | cytosol | 45.45 | 47.07 |
| PGSC0003DMT400029640 | Potato | cytosol | 34.57 | 39.34 |
| CDX91288 | Canola | cytosol | 26.53 | 38.17 |
| Zm00001d010852_P002 | Maize | plastid | 39.88 | 37.37 |
| Os05t0151400-01 | Rice | plastid | 41.64 | 36.06 |
| Zm00001d035812_P003 | Maize | plastid | 40.32 | 35.05 |
| Bra018546.1-P | Field mustard | mitochondrion | 27.41 | 34.75 |
| OQU77419 | Sorghum | nucleus | 40.94 | 34.68 |
| TraesCS1A01G093900.3 | Wheat | cytosol, nucleus, plastid | 42.62 | 33.85 |
| KRH43000 | Soybean | nucleus | 35.46 | 33.84 |
| KRH59116 | Soybean | nucleus | 36.96 | 33.71 |
| TraesCS1D01G102500.3 | Wheat | cytosol, nucleus, plastid | 42.44 | 33.68 |
| TraesCS1B01G122000.4 | Wheat | cytosol, nucleus, plastid | 42.44 | 33.45 |
| HORVU1Hr1G021840.9 | Barley | nucleus | 42.0 | 33.31 |
| CDX97270 | Canola | cytosol | 12.38 | 31.89 |
| VIT_05s0020g01290.t01 | Wine grape | cytosol | 35.81 | 31.37 |
| VIT_07s0005g00180.t01 | Wine grape | plastid | 40.41 | 31.19 |
| Solyc01g080780.2.1 | Tomato | nucleus | 30.24 | 31.03 |
| Solyc09g074940.1.1 | Tomato | plastid | 37.49 | 30.22 |
| GSMUA_Achr1P22210_001 | Banana | cytosol | 3.71 | 30.22 |
| PGSC0003DMT400016119 | Potato | cytosol, nucleus, plastid | 34.04 | 28.29 |
| AT4G02510.4 | Thale cress | nucleus | 37.14 | 27.94 |
| GSMUA_AchrUn_... | Banana | cytosol | 7.69 | 27.88 |
| GSMUA_Achr1P09910_001 | Banana | mitochondrion | 17.86 | 26.65 |
| Bra036261.1-P | Field mustard | nucleus | 36.25 | 26.38 |
| GSMUA_Achr8P19440_001 | Banana | cytosol | 25.55 | 24.06 |
| KRH02257 | Soybean | cytosol | 17.42 | 22.91 |
| GSMUA_Achr11P... | Banana | cytosol | 27.94 | 22.41 |
| Bra033515.1-P | Field mustard | cytosol | 17.95 | 18.42 |
| KRH30746 | Soybean | cytosol | 1.95 | 16.79 |
| CDY44175 | Canola | cytosol | 12.47 | 15.26 |
| AT4G15810.1 | Thale cress | cytosol | 11.67 | 14.38 |
| CDY22896 | Canola | cytosol | 12.64 | 14.12 |
| Os01t0356800-00 | Rice | plastid | 24.58 | 5.2 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P20360_001 | EnsemblPlants:GSMUA_Achr6T20360_001 | EnsemblPlantsGene:GSMUA_Achr6G20360_001 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005525 | InterPro:G_AIG1 | InterPro:IPR006703 | InterPro:P-loop_NTPase | InterPro:TOC159_MAD |
| PANTHER:PTHR10903 | PANTHER:PTHR10903:SF39 | PFAM:PF04548 | PFAM:PF11886 | PFscan:PS51720 | SEG:seg |
| SUPFAM:SSF52540 | UniParc:UPI0002967563 | UniProt:M0T8N4 | MapMan:23.1.2.2 | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G20360_001]
Coordinates
chr6:-:14890048..14894388
Molecular Weight (calculated)
122039.0 Da
IEP (calculated)
4.251
GRAVY (calculated)
-0.593
Length
1131 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDSAADPVSL SAARGPKFLP ISPPGSLLIR APLTSEENDS PLASDTSEEE QEGFETASDL EEESINSALA TAALLTPKGD GLSRSTSMPI KARVTRDDDP
0101: DVVALVDELE DEDDDEDDFY GIAKVAVSSQ VPTLVDKGED LMGEQRAGTS LETHVSQTTE GDFLPDSLEI VSDENPKTED SSKNGNLAAE EQKTVENPIP
0201: QSTEEKPIED EDAVDGTLDK YGEHTVSDPQ EKKDGSLVEE LGETASPDIG AIAELKRVED ESEAADVEEE GETNKSCTKE GGLNIEEAKS DTTDELKMGT
0301: DGSGDSSQNI NQSSVPNAHT PEEKSVGSYS AEDIQMSEGS WEKLDQLNDN IGHAKRCVSL TGGSEVVDDK AAEDSADGVD SANANVILSP IHELWDEKPK
0401: VELNQSANDS EVNNNEPVPE LLSDGDNSIS VQDKQSPFII EEKSKGNKNK GDTFETSGVT EDNNDQQLNS VSEPELTEGG DFADHEQNLC QEKAKEDEEN
0501: LGSDEPSKVA MVASLEGAKE MRKELDEDSS TTGLHSVLHS SKDIDDQIIL DSDEEVLTYK DDEGNEMIDS DALVALLKAA SSSTADGGPK VTSQDANRIF
0601: SVDRPAGLGS SIPSLKPAPP RHTNPSILSP SELTVTADHD DQITEEQKKL HEKVELIKVK FLRLVYSRQQ INRAFSLESA KKKALQLEQD DTEGLDFCCN
0701: ILVLGKSGVG KSATINSIFG EEKSQTNAFE PATTSIKEIV GTVGGVKIRV IDTPGLRASG MDQASSRRIL TSIKKYTRRC PPDIVLYVDR MDTLTRDQND
0801: LPLLRTITST LGSSIWFNAI VALTHAASAP PDGPSGSPLS YEVFVAQRSH AVQQSIRLAA GDMRLMNPVA LVENHATCRR NRDGQKSRPH PKLPADQGAS
0901: SEETDNAPAT IPVPLPDMVL PPSFDCDAPT YRYRFLEPTS QFLARPVLDT HGWDHDCGFD GVSLEEGLAV AGRFPAVLSA QVTKDKKEFS IHLDSSISAK
1001: HGENGSTLSG FDIQAVGKQF AYTLRGETKF KTSKKNRSTG GISITFLGET VATGLKFEDQ LSIGKQVNLH SQFSISRSSK MSVRVGLNNK QTGQITVRTS
1101: TSEQLQFALV GIIPIAISIF RSMRSGESST Y
0101: DVVALVDELE DEDDDEDDFY GIAKVAVSSQ VPTLVDKGED LMGEQRAGTS LETHVSQTTE GDFLPDSLEI VSDENPKTED SSKNGNLAAE EQKTVENPIP
0201: QSTEEKPIED EDAVDGTLDK YGEHTVSDPQ EKKDGSLVEE LGETASPDIG AIAELKRVED ESEAADVEEE GETNKSCTKE GGLNIEEAKS DTTDELKMGT
0301: DGSGDSSQNI NQSSVPNAHT PEEKSVGSYS AEDIQMSEGS WEKLDQLNDN IGHAKRCVSL TGGSEVVDDK AAEDSADGVD SANANVILSP IHELWDEKPK
0401: VELNQSANDS EVNNNEPVPE LLSDGDNSIS VQDKQSPFII EEKSKGNKNK GDTFETSGVT EDNNDQQLNS VSEPELTEGG DFADHEQNLC QEKAKEDEEN
0501: LGSDEPSKVA MVASLEGAKE MRKELDEDSS TTGLHSVLHS SKDIDDQIIL DSDEEVLTYK DDEGNEMIDS DALVALLKAA SSSTADGGPK VTSQDANRIF
0601: SVDRPAGLGS SIPSLKPAPP RHTNPSILSP SELTVTADHD DQITEEQKKL HEKVELIKVK FLRLVYSRQQ INRAFSLESA KKKALQLEQD DTEGLDFCCN
0701: ILVLGKSGVG KSATINSIFG EEKSQTNAFE PATTSIKEIV GTVGGVKIRV IDTPGLRASG MDQASSRRIL TSIKKYTRRC PPDIVLYVDR MDTLTRDQND
0801: LPLLRTITST LGSSIWFNAI VALTHAASAP PDGPSGSPLS YEVFVAQRSH AVQQSIRLAA GDMRLMNPVA LVENHATCRR NRDGQKSRPH PKLPADQGAS
0901: SEETDNAPAT IPVPLPDMVL PPSFDCDAPT YRYRFLEPTS QFLARPVLDT HGWDHDCGFD GVSLEEGLAV AGRFPAVLSA QVTKDKKEFS IHLDSSISAK
1001: HGENGSTLSG FDIQAVGKQF AYTLRGETKF KTSKKNRSTG GISITFLGET VATGLKFEDQ LSIGKQVNLH SQFSISRSSK MSVRVGLNNK QTGQITVRTS
1101: TSEQLQFALV GIIPIAISIF RSMRSGESST Y
0001: MDSKSVTPEP TNPFYASSGQ SGKTYASVVA AAAAAAADKE DGGAVSSAKE LDSSSEAVSG NSDKVGADDL SDSEKEKPNL VGDGKVSDEV DGSLKEDSTT
0101: PEATPKPEVV SGETIGVDDV SSLSPKPEAV SDGVGVVEEN KKVKEDVEDI KDDGESKIEN GSVDVDVKQA STDGESESKV KDVEEEDVGT KKDDEGESEL
0201: GGKVDVDDKS DNVIEEEGVE LTDKGDVIVN SSPVESVHVD VAKPGVVVVG DAEGSEELKI NADAETLEVA NKFDQIGDDD SGEFEPVSDK AIEEVEEKFT
0301: SESDSIADSS KLESVDTSAV EPEVVAAESG SEPKDVEKAN GLEKGMTYAE VIKAASAVAD NGTKEEESVL GGIVDDAEEG VKLNNKGDFV VDSSAIEAVN
0401: VDVAKPGVVV VGDVEVSEVL ETDGNIPDVH NKFDPIGQGE GGEVELESDK ATEEGGGKLV SEGDSMVDSS VVDSVDADIN VAEPGVVVVG AAKEAVIKED
0501: DKDDEVDKTI SNIEEPDDLT AAYDGNFELA VKEISEAAKV EPDEPKVGVE VEELPVSESL KVGSVDAEED SIPAAESQFE VRKVVEGDSA EEDENKLPVE
0601: DIVSSREFSF GGKEVDQEPS GEGVTRVDGS ESEEETEEMI FGSSEAAKQF LAELEKASSG IEAHSDEANI SNNMSDRIDG QIVTDSDEDV DTEDEGEEKM
0701: FDTAALAALL KAATGGGSSE GGNFTITSQD GTKLFSMDRP AGLSSSLRPL KPAAAPRANR SNIFSNSNVT MADETEINLS EEEKQKLEKL QSLRVKFLRL
0801: LQRLGHSAED SIAAQVLYRL ALLAGRQAGQ LFSLDAAKKK AVESEAEGNE ELIFSLNILV LGKAGVGKSA TINSILGNQI ASIDAFGLST TSVREISGTV
0901: NGVKITFIDT PGLKSAAMDQ STNAKMLSSV KKVMKKCPPD IVLYVDRLDT QTRDLNNLPL LRTITASLGT SIWKNAIVTL THAASAPPDG PSGTPLSYDV
1001: FVAQCSHIVQ QSIGQAVGDL RLMNPSLMNP VSLVENHPLC RKNREGVKVL PNGQTWRSQL LLLCYSLKVL SETNSLLRPQ EPLDHRKVFG FRVRSPPLPY
1101: LLSWLLQSRA HPKLPGDQGG DSVDSDIEID DVSDSEQEDG EDDEYDQLPP FKPLRKTQLA KLSNEQRKAY FEEYDYRVKL LQKKQWREEL KRMKEMKKNG
1201: KKLGESEFGY PGEEDDPENG APAAVPVPLP DMVLPPSFDS DNSAYRYRYL EPTSQLLTRP VLDTHGWDHD CGYDGVNAEH SLALASRFPA TATVQVTKDK
1301: KEFNIHLDSS VSAKHGENGS TMAGFDIQNV GKQLAYVVRG ETKFKNLRKN KTTVGGSVTF LGENIATGVK LEDQIALGKR LVLVGSTGTM RSQGDSAYGA
1401: NLEVRLREAD FPIGQDQSSF GLSLVKWRGD LALGANLQSQ VSVGRNSKIA LRAGLNNKMS GQITVRTSSS DQLQIALTAI LPIAMSIYKS IRPEATNDKY
1501: SMY
0101: PEATPKPEVV SGETIGVDDV SSLSPKPEAV SDGVGVVEEN KKVKEDVEDI KDDGESKIEN GSVDVDVKQA STDGESESKV KDVEEEDVGT KKDDEGESEL
0201: GGKVDVDDKS DNVIEEEGVE LTDKGDVIVN SSPVESVHVD VAKPGVVVVG DAEGSEELKI NADAETLEVA NKFDQIGDDD SGEFEPVSDK AIEEVEEKFT
0301: SESDSIADSS KLESVDTSAV EPEVVAAESG SEPKDVEKAN GLEKGMTYAE VIKAASAVAD NGTKEEESVL GGIVDDAEEG VKLNNKGDFV VDSSAIEAVN
0401: VDVAKPGVVV VGDVEVSEVL ETDGNIPDVH NKFDPIGQGE GGEVELESDK ATEEGGGKLV SEGDSMVDSS VVDSVDADIN VAEPGVVVVG AAKEAVIKED
0501: DKDDEVDKTI SNIEEPDDLT AAYDGNFELA VKEISEAAKV EPDEPKVGVE VEELPVSESL KVGSVDAEED SIPAAESQFE VRKVVEGDSA EEDENKLPVE
0601: DIVSSREFSF GGKEVDQEPS GEGVTRVDGS ESEEETEEMI FGSSEAAKQF LAELEKASSG IEAHSDEANI SNNMSDRIDG QIVTDSDEDV DTEDEGEEKM
0701: FDTAALAALL KAATGGGSSE GGNFTITSQD GTKLFSMDRP AGLSSSLRPL KPAAAPRANR SNIFSNSNVT MADETEINLS EEEKQKLEKL QSLRVKFLRL
0801: LQRLGHSAED SIAAQVLYRL ALLAGRQAGQ LFSLDAAKKK AVESEAEGNE ELIFSLNILV LGKAGVGKSA TINSILGNQI ASIDAFGLST TSVREISGTV
0901: NGVKITFIDT PGLKSAAMDQ STNAKMLSSV KKVMKKCPPD IVLYVDRLDT QTRDLNNLPL LRTITASLGT SIWKNAIVTL THAASAPPDG PSGTPLSYDV
1001: FVAQCSHIVQ QSIGQAVGDL RLMNPSLMNP VSLVENHPLC RKNREGVKVL PNGQTWRSQL LLLCYSLKVL SETNSLLRPQ EPLDHRKVFG FRVRSPPLPY
1101: LLSWLLQSRA HPKLPGDQGG DSVDSDIEID DVSDSEQEDG EDDEYDQLPP FKPLRKTQLA KLSNEQRKAY FEEYDYRVKL LQKKQWREEL KRMKEMKKNG
1201: KKLGESEFGY PGEEDDPENG APAAVPVPLP DMVLPPSFDS DNSAYRYRYL EPTSQLLTRP VLDTHGWDHD CGYDGVNAEH SLALASRFPA TATVQVTKDK
1301: KEFNIHLDSS VSAKHGENGS TMAGFDIQNV GKQLAYVVRG ETKFKNLRKN KTTVGGSVTF LGENIATGVK LEDQIALGKR LVLVGSTGTM RSQGDSAYGA
1401: NLEVRLREAD FPIGQDQSSF GLSLVKWRGD LALGANLQSQ VSVGRNSKIA LRAGLNNKMS GQITVRTSSS DQLQIALTAI LPIAMSIYKS IRPEATNDKY
1501: SMY
Arabidopsis Description
TOC159Translocase of chloroplast 159, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O81283]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.