Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- nucleus 3
- mitochondrion 4
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os12t0143300-01 | Rice | mitochondrion | 35.03 | 55.36 |
| Zm00001d023241_P001 | Maize | plastid | 47.46 | 51.85 |
| EES15547 | Sorghum | mitochondrion, nucleus, plastid | 47.46 | 51.53 |
| VIT_13s0158g00160.t01 | Wine grape | plastid | 46.33 | 51.25 |
| TraesCS4A01G185100.1 | Wheat | mitochondrion, plastid | 46.89 | 49.7 |
| TraesCS4B01G133500.1 | Wheat | mitochondrion, plastid | 46.33 | 49.4 |
| TraesCS4D01G128500.1 | Wheat | mitochondrion, plastid | 46.33 | 49.1 |
| KRH39891 | Soybean | mitochondrion, plastid | 46.89 | 47.16 |
| AT5G43210.1 | Thale cress | mitochondrion, nucleus | 44.07 | 45.88 |
| Bra035963.1-P | Field mustard | cytosol, plastid | 42.94 | 44.97 |
| CDY46487 | Canola | cytosol, plastid | 42.94 | 44.97 |
| Os11t0146550-00 | Rice | plastid | 49.72 | 43.14 |
| Solyc01g088030.2.1 | Tomato | nucleus | 46.89 | 41.5 |
| HORVU4Hr1G025850.7 | Barley | cytosol | 46.89 | 37.56 |
| PGSC0003DMT400017614 | Potato | plastid | 45.76 | 36.65 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr11P10300_001 | EnsemblPlants:GSMUA_Achr11T10300_001 | EnsemblPlantsGene:GSMUA_Achr11G10300_001 | Gene3D:3.40.1440.10 | InterPro:GIY-YIG_endonuc | InterPro:GIY-YIG_endonuc_sf |
| InterPro:IPR000305 | InterPro:IPR035901 | PANTHER:PTHR20208 | PANTHER:PTHR20208:SF13 | PFAM:PF01541 | PFscan:PS50164 |
| SEG:seg | SUPFAM:SSF82771 | UniParc:UPI000296C0D7 | UniProt:M0RR10 | MapMan:35.2 | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr11G10300_001]
Coordinates
chr11:+:8107888..8112003
Molecular Weight (calculated)
19784.8 Da
IEP (calculated)
11.705
GRAVY (calculated)
-0.589
Length
177 amino acids
Sequence
(BLAST)
(BLAST)
001: MRLSSTLRSV KGSRPIHTKS TPTSSTALSP SSLSSTSSSL LRNHHNKKRG GKQQRPKNVG WSVYLIVSSR LPRTYVGVTT NFLRRLKQHN GILKGGAKAC
101: SAGRPWTLAC IIRGFKDRSE ACEFESKWKS VSRRVPRKTK QDCAANPLLE HRRAALNCVR GLFDCSYLQI EWQSSLS
101: SAGRPWTLAC IIRGFKDRSE ACEFESKWKS VSRRVPRKTK QDCAANPLLE HRRAALNCVR GLFDCSYLQI EWQSSLS
001: MTRLLSRTFP SVKLRDSNPK APEFKNLKNS QTQVPIPSSS SPQENSKIPK SKSWSVYLIL STTEPIKTYV GITTDFSRRL KQHNGEIRGG AKASSAGRPW
101: LCACIITGFT CLSQASSFES KWKIFTRKLP RRKKDEDMSQ SDALLQHRRR ALNKVEESLD CSYLETDWKI
101: LCACIITGFT CLSQASSFES KWKIFTRKLP RRKKDEDMSQ SDALLQHRRR ALNKVEESLD CSYLETDWKI
Arabidopsis Description
Emb [Source:UniProtKB/TrEMBL;Acc:Q9FHS4]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.