Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 1
- mitochondrion 5
- nucleus 3
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G43210.1 | EES09373 | AT4G09570.1 | 19130088 |
| AT5G43210.1 | EES16732 | AT4G09570.1 | 19130088 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d023241_P001 | Maize | plastid | 89.57 | 90.12 |
| TraesCS4A01G185100.1 | Wheat | mitochondrion, plastid | 74.85 | 73.05 |
| TraesCS4D01G128500.1 | Wheat | mitochondrion, plastid | 74.85 | 73.05 |
| Os12t0143300-01 | Rice | mitochondrion | 49.69 | 72.32 |
| TraesCS4B01G133500.1 | Wheat | mitochondrion, plastid | 73.01 | 71.69 |
| Os11t0146550-00 | Rice | plastid | 76.07 | 60.78 |
| HORVU4Hr1G025850.7 | Barley | cytosol | 76.07 | 56.11 |
| VIT_13s0158g00160.t01 | Wine grape | plastid | 46.63 | 47.5 |
| GSMUA_Achr11P... | Banana | mitochondrion | 51.53 | 47.46 |
| AT5G43210.1 | Thale cress | mitochondrion, nucleus | 44.79 | 42.94 |
| KRH39891 | Soybean | mitochondrion, plastid | 46.01 | 42.61 |
| Solyc01g088030.2.1 | Tomato | nucleus | 50.31 | 41.0 |
| Bra035963.1-P | Field mustard | cytosol, plastid | 42.33 | 40.83 |
| CDY46487 | Canola | cytosol, plastid | 42.33 | 40.83 |
| PGSC0003DMT400017614 | Potato | plastid | 52.76 | 38.91 |
Protein Annotations
| EnsemblPlants:EES15547 | EnsemblPlantsGene:SORBI_3008G011300 | EntrezGene:8070342 | Gene3D:3.40.1440.10 | InterPro:GIY-YIG_endonuc | InterPro:GIY-YIG_endonuc_sf |
| InterPro:IPR000305 | InterPro:IPR035901 | PANTHER:PTHR20208 | PANTHER:PTHR20208:SF13 | PFAM:PF01541 | PFscan:PS50164 |
| ProteinID:EES15547 | ProteinID:EES15547.1 | RefSeq:XP_002441709.1 | SUPFAM:SSF82771 | UniParc:UPI0001A8838E | UniProt:C5YQ83 |
| MapMan:35.2 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr8:+:926483..928724
Molecular Weight (calculated)
17756.4 Da
IEP (calculated)
10.811
GRAVY (calculated)
-0.453
Length
163 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLTAAFRAA KIPRPLPPKC GEPAAATSAS ASGDPPAVPA KSTKAPPPPW CVYLIASSRI PRTYVGVTTD FPRRLRQHNG ELKGGAKAAS AGRPWNLACL
101: VEGFANRSEA CEFESKWKNI SRKMARKRTE PSLKSVLQHR EAALSRVEAF MDCSHLQIKW QSS
101: VEGFANRSEA CEFESKWKNI SRKMARKRTE PSLKSVLQHR EAALSRVEAF MDCSHLQIKW QSS
001: MTRLLSRTFP SVKLRDSNPK APEFKNLKNS QTQVPIPSSS SPQENSKIPK SKSWSVYLIL STTEPIKTYV GITTDFSRRL KQHNGEIRGG AKASSAGRPW
101: LCACIITGFT CLSQASSFES KWKIFTRKLP RRKKDEDMSQ SDALLQHRRR ALNKVEESLD CSYLETDWKI
101: LCACIITGFT CLSQASSFES KWKIFTRKLP RRKKDEDMSQ SDALLQHRRR ALNKVEESLD CSYLETDWKI
Arabidopsis Description
Emb [Source:UniProtKB/TrEMBL;Acc:Q9FHS4]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.