Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- nucleus 2
- mitochondrion 4
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G43210.1 | KRG91803 | AT4G09570.1 | 19130088 |
| AT5G43210.1 | KRH34983 | AT4G09570.1 | 19130088 |
| AT5G43210.1 | KRH34984 | AT4G09570.1 | 19130088 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_13s0158g00160.t01 | Wine grape | plastid | 57.95 | 63.75 |
| Bra035963.1-P | Field mustard | cytosol, plastid | 50.0 | 52.07 |
| CDY46487 | Canola | cytosol, plastid | 50.0 | 52.07 |
| AT5G43210.1 | Thale cress | mitochondrion, nucleus | 48.86 | 50.59 |
| Os12t0143300-01 | Rice | mitochondrion | 31.25 | 49.11 |
| TraesCS4D01G128500.1 | Wheat | mitochondrion, plastid | 46.02 | 48.5 |
| TraesCS4B01G133500.1 | Wheat | mitochondrion, plastid | 45.45 | 48.19 |
| TraesCS4A01G185100.1 | Wheat | mitochondrion, plastid | 45.45 | 47.9 |
| GSMUA_Achr11P... | Banana | mitochondrion | 47.16 | 46.89 |
| Zm00001d023241_P001 | Maize | plastid | 42.61 | 46.3 |
| EES15547 | Sorghum | mitochondrion, nucleus, plastid | 42.61 | 46.01 |
| Solyc01g088030.2.1 | Tomato | nucleus | 52.27 | 46.0 |
| PGSC0003DMT400017614 | Potato | plastid | 50.57 | 40.27 |
| Os11t0146550-00 | Rice | plastid | 46.02 | 39.71 |
| HORVU4Hr1G025850.7 | Barley | cytosol | 46.02 | 36.65 |
Protein Annotations
| EMBL:ACUP02006010 | EnsemblPlants:KRH39891 | EnsemblPlantsGene:GLYMA_09G226100 | EntrezGene:100805152 | Gene3D:3.40.1440.10 | InterPro:GIY-YIG_endonuc |
| InterPro:GIY-YIG_endonuc_sf | InterPro:IPR000305 | InterPro:IPR035901 | PANTHER:PTHR20208 | PANTHER:PTHR20208:SF13 | PFAM:PF01541 |
| PFscan:PS50164 | ProteinID:KRH39891 | ProteinID:KRH39891.1 | SEG:seg | UniParc:UPI0002962D91 | UniProt:K7LFH4 |
| MapMan:35.2 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr9:+:45092026..45096558
Molecular Weight (calculated)
19912.8 Da
IEP (calculated)
10.765
GRAVY (calculated)
-0.735
Length
176 amino acids
Sequence
(BLAST)
(BLAST)
001: MMGTLSTQFR SIKRPNSNPK LSKSSSPTKS EIKFNAKPKP KSESESESWS VYLILSTNHP IKTYVGITNN FPRRWCSLKQ HNGELKGGAK ASRAGRPWIC
101: ACIICGFTDR SEASVFESKW KTFSRRAPRK NQNDNLSKQS EDSSLPLLRH RQAALNRVKG SLDCAHLEII WHLDPL
101: ACIICGFTDR SEASVFESKW KTFSRRAPRK NQNDNLSKQS EDSSLPLLRH RQAALNRVKG SLDCAHLEII WHLDPL
001: MTRLLSRTFP SVKLRDSNPK APEFKNLKNS QTQVPIPSSS SPQENSKIPK SKSWSVYLIL STTEPIKTYV GITTDFSRRL KQHNGEIRGG AKASSAGRPW
101: LCACIITGFT CLSQASSFES KWKIFTRKLP RRKKDEDMSQ SDALLQHRRR ALNKVEESLD CSYLETDWKI
101: LCACIITGFT CLSQASSFES KWKIFTRKLP RRKKDEDMSQ SDALLQHRRR ALNKVEESLD CSYLETDWKI
Arabidopsis Description
Emb [Source:UniProtKB/TrEMBL;Acc:Q9FHS4]
SUBAcon: [mitochondrion,nucleus]
SUBAcon: [mitochondrion,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.