Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 1
- endoplasmic reticulum 1
- plastid 2
- mitochondrion 5
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G22530.1 | GSMUA_Achr10P... | AT1G35670.1 | 19130088 |
| AT3G22530.1 | GSMUA_Achr2P08110_001 | AT1G35670.1 | 19130088 |
| AT3G22530.1 | GSMUA_Achr6P25560_001 | AT1G35670.1 | 19130088 |
| AT3G22530.1 | GSMUA_Achr9P08680_001 | AT1G35670.1 | 19130088 |
| AT3G22530.1 | GSMUA_Achr10P... | AT4G09570.1 | 19130088 |
| AT3G22530.1 | GSMUA_Achr2P08110_001 | AT4G09570.1 | 19130088 |
| AT3G22530.1 | GSMUA_Achr6P25560_001 | AT4G09570.1 | 19130088 |
| AT3G22530.1 | GSMUA_Achr9P08680_001 | AT4G09570.1 | 19130088 |
| AT4G14830.1 | GSMUA_Achr10P... | AT1G35670.1 | 19130088 |
| AT4G14830.1 | GSMUA_Achr2P08110_001 | AT1G35670.1 | 19130088 |
| AT4G14830.1 | GSMUA_Achr6P25560_001 | AT1G35670.1 | 19130088 |
| AT4G14830.1 | GSMUA_Achr9P08680_001 | AT1G35670.1 | 19130088 |
| AT4G14830.1 | GSMUA_Achr10P... | AT4G09570.1 | 19130088 |
| AT4G14830.1 | GSMUA_Achr2P08110_001 | AT4G09570.1 | 19130088 |
| AT4G14830.1 | GSMUA_Achr6P25560_001 | AT4G09570.1 | 19130088 |
| AT4G14830.1 | GSMUA_Achr9P08680_001 | AT4G09570.1 | 19130088 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P25740_001 | Banana | mitochondrion | 64.57 | 70.19 |
| TraesCS2D01G246400.1 | Wheat | mitochondrion | 56.0 | 57.65 |
| TraesCS2B01G259800.1 | Wheat | mitochondrion | 56.0 | 57.65 |
| Zm00001d018908_P001 | Maize | mitochondrion | 53.71 | 55.62 |
| Os07t0173100-00 | Rice | mitochondrion | 54.29 | 55.56 |
| EER95920 | Sorghum | mitochondrion | 56.0 | 55.37 |
| Zm00001d007836_P001 | Maize | mitochondrion | 52.57 | 54.12 |
| PGSC0003DMT400049751 | Potato | mitochondrion | 49.71 | 53.7 |
| Solyc09g065370.1.1 | Tomato | mitochondrion | 49.14 | 53.09 |
| AT4G14830.1 | Thale cress | cytosol | 44.57 | 51.32 |
| OQU90686 | Sorghum | cytosol, mitochondrion | 42.86 | 47.77 |
| VIT_07s0151g00830.t01 | Wine grape | cytosol | 45.14 | 47.59 |
| CDY34247 | Canola | cytosol | 44.0 | 47.53 |
| Bra023821.1-P | Field mustard | cytosol | 44.0 | 47.53 |
| KRG91317 | Soybean | endoplasmic reticulum, extracellular | 52.0 | 46.91 |
| Solyc06g084220.1.1 | Tomato | plastid | 38.86 | 46.9 |
| PGSC0003DMT400034952 | Potato | cytosol | 39.43 | 46.62 |
| PGSC0003DMT400051869 | Potato | plastid | 38.86 | 46.26 |
| CDX98212 | Canola | mitochondrion | 42.86 | 46.01 |
| KRH35512 | Soybean | endoplasmic reticulum, extracellular | 50.86 | 45.88 |
| Zm00001d027742_P001 | Maize | cytosol | 42.29 | 45.68 |
| KRH77848 | Soybean | mitochondrion | 36.0 | 45.65 |
| Os03t0159900-01 | Rice | cytosol | 41.71 | 45.06 |
| PGSC0003DMT400075166 | Potato | cytosol | 34.29 | 44.12 |
| PGSC0003DMT400042036 | Potato | cytosol | 42.29 | 44.05 |
| EER92826 | Sorghum | cytosol | 42.29 | 43.79 |
| PGSC0003DMT400082124 | Potato | cytosol, mitochondrion | 45.71 | 42.55 |
| TraesCS4D01G274600.1 | Wheat | cytosol | 36.57 | 42.11 |
| AT3G22530.1 | Thale cress | endoplasmic reticulum, extracellular | 47.43 | 41.92 |
| TraesCS4B01G276100.1 | Wheat | cytosol | 36.0 | 41.45 |
| TraesCS4A01G030000.1 | Wheat | cytosol | 36.0 | 41.45 |
| Bra039959.1-P | Field mustard | extracellular | 45.14 | 41.15 |
| Solyc09g061350.1.1 | Tomato | cytosol | 25.14 | 40.37 |
| CDY10651 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 44.57 | 39.8 |
| Solyc09g082150.1.1 | Tomato | cytosol | 24.57 | 39.45 |
| VIT_05s0020g03610.t01 | Wine grape | cytosol | 53.71 | 39.0 |
| KRH71407 | Soybean | mitochondrion | 30.86 | 38.85 |
| CDY10290 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 42.86 | 38.27 |
| Solyc06g054150.1.1 | Tomato | extracellular, golgi, mitochondrion, plastid | 41.71 | 35.61 |
| Solyc09g061510.1.1 | Tomato | cytosol | 18.29 | 34.41 |
| KRH32032 | Soybean | mitochondrion | 24.0 | 32.81 |
| KRH55262 | Soybean | cytosol, plasma membrane, plastid | 31.43 | 31.79 |
| HORVU4Hr1G073230.1 | Barley | plastid | 37.71 | 24.44 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr9P10550_001 | EnsemblPlants:GSMUA_Achr9T10550_001 | EnsemblPlantsGene:GSMUA_Achr9G10550_001 | PANTHER:PTHR33879 | PANTHER:PTHR33879:SF3 | SEG:seg |
| UniParc:UPI000295D0BA | UniProt:M0TZ64 | MapMan:35.2 | : | : | : |
Description
expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr9G10550_001]
Coordinates
chr9:-:6879462..6880124
Molecular Weight (calculated)
18957.4 Da
IEP (calculated)
5.624
GRAVY (calculated)
-0.275
Length
175 amino acids
Sequence
(BLAST)
(BLAST)
001: MRVHPVPKKR NITFRCGVNP AAAATAVHGR QKKLRRLPHI FSKVLELPFA ADADVAVEED ADGFRFVAAT DVLWGDVQAQ TVQIHPGMTK VFVRDGSDGD
101: DLDTELELNR WRFRLPPSTR PALATAAYTS GELVVTIPKG AGPEEEDGEV QEFFGGGGSN GDLGGRDISH LVIVQ
101: DLDTELELNR WRFRLPPSTR PALATAAYTS GELVVTIPKG AGPEEEDGEV QEFFGGGGSN GDLGGRDISH LVIVQ
001: MILIPVKIQS LFSYLLLLNL IQSIDKPNPE AMRVHPIPRN INNTLIHHHH HNPTREPGKN LRRLPHIFNR VLELPLRSEA DVAVEERHDC FRFVAETVGL
101: CNGDGEMRAY MVEIHPGITK IVVRTNGSSS LGLSLDELEL DVWRFRLPES TRPELVTVAC VDGDLIVTVP KNAEEEDDDG GGGDFGQGIG SGRLVLVQ
101: CNGDGEMRAY MVEIHPGITK IVVRTNGSSS LGLSLDELEL DVWRFRLPES TRPELVTVAC VDGDLIVTVP KNAEEEDDDG GGGDFGQGIG SGRLVLVQ
Arabidopsis Description
Heat shock protein [Source:UniProtKB/TrEMBL;Acc:Q8VY73]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.