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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 4
  • plasma membrane 4
  • golgi 4
  • plastid 1
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra034407.1-P

Inferred from Arabidopsis experimental PPI

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY10651 Canola endoplasmic reticulum, extracellular, plasma membrane 97.92 95.92
Bra023821.1-P Field mustard cytosol 64.06 75.93
AT4G14830.1 Thale cress cytosol 58.85 74.34
AT3G22530.1 Thale cress endoplasmic reticulum, extracellular 71.88 69.7
KRG91317 Soybean endoplasmic reticulum, extracellular 51.56 51.03
KRH35512 Soybean endoplasmic reticulum, extracellular 50.52 50.0
PGSC0003DMT400034952 Potato cytosol 37.5 48.65
GSMUA_Achr9P25740_001 Banana mitochondrion 40.62 48.45
PGSC0003DMT400075166 Potato cytosol 32.81 46.32
Solyc09g061350.1.1 Tomato cytosol 26.04 45.87
GSMUA_Achr9P10550_001 Banana mitochondrion 41.15 45.14
KRH77848 Soybean mitochondrion 31.77 44.2
TraesCS2B01G259800.1 Wheat mitochondrion 39.06 44.12
Solyc09g061510.1.1 Tomato cytosol 21.35 44.09
Solyc09g082150.1.1 Tomato cytosol 25.0 44.04
TraesCS2D01G246400.1 Wheat mitochondrion 38.54 43.53
PGSC0003DMT400082124 Potato cytosol, mitochondrion 42.19 43.09
PGSC0003DMT400042036 Potato cytosol 37.5 42.86
TraesCS4B01G276100.1 Wheat cytosol 33.33 42.11
Zm00001d027742_P001 Maize cytosol 35.42 41.98
TraesCS4A01G030000.1 Wheat cytosol 32.81 41.45
TraesCS4D01G274600.1 Wheat cytosol 32.81 41.45
EER92826 Sorghum cytosol 35.94 40.83
Os03t0159900-01 Rice cytosol 34.38 40.74
Zm00001d018908_P001 Maize mitochondrion 35.42 40.24
Os07t0173100-00 Rice mitochondrion 35.42 39.77
Zm00001d007836_P001 Maize mitochondrion 34.38 38.82
VIT_05s0020g03610.t01 Wine grape cytosol 48.44 38.59
EER95920 Sorghum mitochondrion 35.42 38.42
Solyc06g054150.1.1 Tomato extracellular, golgi, mitochondrion, plastid 39.06 36.59
OQU90686 Sorghum cytosol, mitochondrion 29.69 36.31
KRH55262 Soybean cytosol, plasma membrane, plastid 28.12 31.21
HORVU4Hr1G073230.1 Barley plastid 35.42 25.19
Protein Annotations
EnsemblPlants:Bra039959.1EnsemblPlants:Bra039959.1-PEnsemblPlantsGene:Bra039959PANTHER:PTHR33879PANTHER:PTHR33879:SF3SEG:seg
SignalP:SignalP-noTMUniParc:UPI0002547446UniProt:M4FFT5MapMan:35.2::
Description
AT3G22530 (E=2e-066) | unknown protein
Coordinates
chrA05:+:15406261..15406839
Molecular Weight (calculated)
21710.6 Da
IEP (calculated)
6.418
GRAVY (calculated)
-0.045
Length
192 amino acids
Sequence
(BLAST)
001: MVLIPWNRSF PSLILSLLII LTIEKPDPEA MRVHPIPRNL NNTLIHHHHH RNPTREPGKN LRRLPHIFSR VLELPLRSEA DVAVEEKHDC FRFVAETEGL
101: CDGGEMRAYV VDIHPGITKI VVRTNGLSLG LSLDELELDM WRFRLPETTR PELVTVVCVD GILIVTVPKM VPEEEDGGFG QGMASGRLVL VQ
Best Arabidopsis Sequence Match ( AT3G22530.1 )
(BLAST)
001: MILIPVKIQS LFSYLLLLNL IQSIDKPNPE AMRVHPIPRN INNTLIHHHH HNPTREPGKN LRRLPHIFNR VLELPLRSEA DVAVEERHDC FRFVAETVGL
101: CNGDGEMRAY MVEIHPGITK IVVRTNGSSS LGLSLDELEL DVWRFRLPES TRPELVTVAC VDGDLIVTVP KNAEEEDDDG GGGDFGQGIG SGRLVLVQ
Arabidopsis Description
Heat shock protein [Source:UniProtKB/TrEMBL;Acc:Q8VY73]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.