Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 6
- vacuole 5
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039959.1-P | Field mustard | extracellular | 95.92 | 97.92 |
| CDY10290 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 89.8 | 89.8 |
| CDX98212 | Canola | mitochondrion | 66.84 | 80.37 |
| CDY34247 | Canola | cytosol | 62.76 | 75.93 |
| AT4G14830.1 | Thale cress | cytosol | 58.16 | 75.0 |
| AT3G22530.1 | Thale cress | endoplasmic reticulum, extracellular | 70.41 | 69.7 |
| KRG91317 | Soybean | endoplasmic reticulum, extracellular | 50.0 | 50.52 |
| KRH35512 | Soybean | endoplasmic reticulum, extracellular | 48.98 | 49.48 |
| GSMUA_Achr9P25740_001 | Banana | mitochondrion | 40.31 | 49.07 |
| PGSC0003DMT400034952 | Potato | cytosol | 35.71 | 47.3 |
| PGSC0003DMT400075166 | Potato | cytosol | 32.65 | 47.06 |
| Solyc09g061350.1.1 | Tomato | cytosol | 25.51 | 45.87 |
| GSMUA_Achr9P10550_001 | Banana | mitochondrion | 39.8 | 44.57 |
| KRH77848 | Soybean | mitochondrion | 31.12 | 44.2 |
| Solyc09g061510.1.1 | Tomato | cytosol | 20.92 | 44.09 |
| PGSC0003DMT400042036 | Potato | cytosol | 37.76 | 44.05 |
| TraesCS2B01G259800.1 | Wheat | mitochondrion | 37.76 | 43.53 |
| Solyc09g082150.1.1 | Tomato | cytosol | 23.98 | 43.12 |
| TraesCS2D01G246400.1 | Wheat | mitochondrion | 37.24 | 42.94 |
| Zm00001d027742_P001 | Maize | cytosol | 35.2 | 42.59 |
| PGSC0003DMT400082124 | Potato | cytosol, mitochondrion | 40.82 | 42.55 |
| TraesCS4B01G276100.1 | Wheat | cytosol | 32.14 | 41.45 |
| EER92826 | Sorghum | cytosol | 35.71 | 41.42 |
| Os03t0159900-01 | Rice | cytosol | 34.18 | 41.36 |
| TraesCS4A01G030000.1 | Wheat | cytosol | 31.63 | 40.79 |
| TraesCS4D01G274600.1 | Wheat | cytosol | 31.63 | 40.79 |
| Zm00001d018908_P001 | Maize | mitochondrion | 34.18 | 39.65 |
| Os07t0173100-00 | Rice | mitochondrion | 34.18 | 39.18 |
| VIT_05s0020g03610.t01 | Wine grape | cytosol | 47.96 | 39.0 |
| Zm00001d007836_P001 | Maize | mitochondrion | 33.16 | 38.24 |
| EER95920 | Sorghum | mitochondrion | 34.18 | 37.85 |
| Solyc06g054150.1.1 | Tomato | extracellular, golgi, mitochondrion, plastid | 38.78 | 37.07 |
| OQU90686 | Sorghum | cytosol, mitochondrion | 28.57 | 35.67 |
| KRH55262 | Soybean | cytosol, plasma membrane, plastid | 27.55 | 31.21 |
| HORVU4Hr1G073230.1 | Barley | plastid | 35.71 | 25.93 |
Protein Annotations
| EnsemblPlants:CDY10651 | EnsemblPlantsGene:GSBRNA2T00048400001 | PANTHER:PTHR33879 | PANTHER:PTHR33879:SF3 | ProteinID:CDY10651 | ProteinID:CDY10651.1 |
| SEG:seg | SignalP:SignalP-noTM | UniParc:UPI0004EEA1FD | UniProt:A0A078FB95 | MapMan:35.2 | : |
Description
BnaA05g17110DBnaA05g17110D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FB95]
Coordinates
chrLK032005:-:307764..308476
Molecular Weight (calculated)
22331.4 Da
IEP (calculated)
6.720
GRAVY (calculated)
-0.078
Length
196 amino acids
Sequence
(BLAST)
(BLAST)
001: MVLIPWNRSQ FLFPSLILSL LIILTIEKPD PEAMRVHPIP RNLNNNTLIH HHHRRNPTRE PGKNLRRLPH IFSRVLELPL RSEADVAVEE KHDCFRFVAE
101: TEGLCDGGEM RAYVVDIHPG ITKIVVRTNG LSLGLSLDEL ELDMWRFRLP ETTRPELVTV VCVDGVLIVT VPKMLPEEED GGFRQGMASG RLVLVQ
101: TEGLCDGGEM RAYVVDIHPG ITKIVVRTNG LSLGLSLDEL ELDMWRFRLP ETTRPELVTV VCVDGVLIVT VPKMLPEEED GGFRQGMASG RLVLVQ
001: MILIPVKIQS LFSYLLLLNL IQSIDKPNPE AMRVHPIPRN INNTLIHHHH HNPTREPGKN LRRLPHIFNR VLELPLRSEA DVAVEERHDC FRFVAETVGL
101: CNGDGEMRAY MVEIHPGITK IVVRTNGSSS LGLSLDELEL DVWRFRLPES TRPELVTVAC VDGDLIVTVP KNAEEEDDDG GGGDFGQGIG SGRLVLVQ
101: CNGDGEMRAY MVEIHPGITK IVVRTNGSSS LGLSLDELEL DVWRFRLPES TRPELVTVAC VDGDLIVTVP KNAEEEDDDG GGGDFGQGIG SGRLVLVQ
Arabidopsis Description
Heat shock protein [Source:UniProtKB/TrEMBL;Acc:Q8VY73]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.