Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d004812_P002 | |
| Zm00001d023560_P002 | |
| Zm00001d053016_P002 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER92826 | Sorghum | cytosol | 83.95 | 80.47 |
| Os03t0159900-01 | Rice | cytosol | 70.99 | 70.99 |
| TraesCS4D01G274600.1 | Wheat | cytosol | 53.09 | 56.58 |
| TraesCS4A01G030000.1 | Wheat | cytosol | 52.47 | 55.92 |
| TraesCS4B01G276100.1 | Wheat | cytosol | 50.0 | 53.29 |
| GSMUA_Achr9P25740_001 | Banana | mitochondrion | 45.68 | 45.96 |
| Zm00001d007836_P001 | Maize | mitochondrion | 47.53 | 45.29 |
| KRH77848 | Soybean | mitochondrion | 38.27 | 44.93 |
| Zm00001d018908_P001 | Maize | mitochondrion | 45.68 | 43.79 |
| GSMUA_Achr9P10550_001 | Banana | mitochondrion | 45.68 | 42.29 |
| AT4G14830.1 | Thale cress | cytosol | 39.51 | 42.11 |
| PGSC0003DMT400051869 | Potato | plastid | 37.65 | 41.5 |
| Solyc06g084220.1.1 | Tomato | plastid | 37.04 | 41.38 |
| Solyc09g082150.1.1 | Tomato | cytosol | 27.78 | 41.28 |
| CDX98212 | Canola | mitochondrion | 41.36 | 41.1 |
| PGSC0003DMT400075166 | Potato | cytosol | 33.95 | 40.44 |
| Bra023821.1-P | Field mustard | cytosol | 40.12 | 40.12 |
| CDY34247 | Canola | cytosol | 40.12 | 40.12 |
| PGSC0003DMT400034952 | Potato | cytosol | 36.42 | 39.86 |
| PGSC0003DMT400049751 | Potato | mitochondrion | 39.51 | 39.51 |
| Solyc09g065370.1.1 | Tomato | mitochondrion | 39.51 | 39.51 |
| PGSC0003DMT400042036 | Potato | cytosol | 40.74 | 39.29 |
| KRG91317 | Soybean | endoplasmic reticulum, extracellular | 46.91 | 39.18 |
| KRH35512 | Soybean | endoplasmic reticulum, extracellular | 46.3 | 38.66 |
| VIT_07s0151g00830.t01 | Wine grape | cytosol | 39.51 | 38.55 |
| PGSC0003DMT400082124 | Potato | cytosol, mitochondrion | 43.83 | 37.77 |
| KRH71407 | Soybean | mitochondrion | 32.1 | 37.41 |
| Bra039959.1-P | Field mustard | extracellular | 41.98 | 35.42 |
| CDY10651 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 42.59 | 35.2 |
| HORVU4Hr1G073230.1 | Barley | plastid | 57.41 | 34.44 |
| Solyc09g061350.1.1 | Tomato | cytosol | 22.84 | 33.95 |
| AT3G22530.1 | Thale cress | endoplasmic reticulum, extracellular | 40.74 | 33.33 |
| Solyc06g054150.1.1 | Tomato | extracellular, golgi, mitochondrion, plastid | 41.98 | 33.17 |
| CDY10290 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 40.12 | 33.16 |
| Solyc09g061510.1.1 | Tomato | cytosol | 18.52 | 32.26 |
| KRH32032 | Soybean | mitochondrion | 24.07 | 30.47 |
| VIT_05s0020g03610.t01 | Wine grape | cytosol | 43.21 | 29.05 |
| KRH55262 | Soybean | cytosol, plasma membrane, plastid | 25.93 | 24.28 |
Protein Annotations
| EMBL:BT043324 | EMBL:EU968483 | EnsemblPlants:Zm00001d027742_P001 | EnsemblPlants:Zm00001d027742_T001 | EnsemblPlantsGene:Zm00001d027742 | EntrezGene:100274542 |
| PANTHER:PTHR33879 | PANTHER:PTHR33879:SF1 | ProteinID:ONL93804.1 | SEG:seg | UniParc:UPI00017B7979 | UniProt:B4G1T6 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr1:-:12448970..12449458
Molecular Weight (calculated)
16898.2 Da
IEP (calculated)
7.580
GRAVY (calculated)
-0.132
Length
162 amino acids
Sequence
(BLAST)
(BLAST)
001: MRIHPASPTA GGKKDLRRLP HVYSKVLELP LPADTDVQVF EGPDAFHFVA APAAGARAAA TVRVRTVRIH PGVTKVVVQA GAAERAADDD AASDSMELDR
101: WRSRLPEPTC PAMAVAGYVD GQLVVTVPKG PGAEEGADAG QGEVTWRCGG GGKITGRLVV VQ
101: WRSRLPEPTC PAMAVAGYVD GQLVVTVPKG PGAEEGADAG QGEVTWRCGG GGKITGRLVV VQ
001: MILIPVKIQS LFSYLLLLNL IQSIDKPNPE AMRVHPIPRN INNTLIHHHH HNPTREPGKN LRRLPHIFNR VLELPLRSEA DVAVEERHDC FRFVAETVGL
101: CNGDGEMRAY MVEIHPGITK IVVRTNGSSS LGLSLDELEL DVWRFRLPES TRPELVTVAC VDGDLIVTVP KNAEEEDDDG GGGDFGQGIG SGRLVLVQ
101: CNGDGEMRAY MVEIHPGITK IVVRTNGSSS LGLSLDELEL DVWRFRLPES TRPELVTVAC VDGDLIVTVP KNAEEEDDDG GGGDFGQGIG SGRLVLVQ
Arabidopsis Description
Heat shock protein [Source:UniProtKB/TrEMBL;Acc:Q8VY73]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.