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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • nucleus 2
  • plastid 2
  • mitochondrion 4
  • cytosol 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400049751 Potato mitochondrion 96.91 96.91
Solyc06g084220.1.1 Tomato plastid 59.26 66.21
VIT_07s0151g00830.t01 Wine grape cytosol 59.26 57.83
GSMUA_Achr9P25740_001 Banana mitochondrion 56.17 56.52
GSMUA_Achr9P10550_001 Banana mitochondrion 53.09 49.14
Zm00001d007836_P001 Maize mitochondrion 49.38 47.06
TraesCS2B01G259800.1 Wheat mitochondrion 49.38 47.06
Os07t0173100-00 Rice mitochondrion 49.38 46.78
Zm00001d018908_P001 Maize mitochondrion 48.77 46.75
TraesCS2D01G246400.1 Wheat mitochondrion 48.77 46.47
EER95920 Sorghum mitochondrion 49.38 45.2
KRH71407 Soybean mitochondrion 38.27 44.6
Solyc09g082150.1.1 Tomato cytosol 28.4 42.2
OQU90686 Sorghum cytosol, mitochondrion 40.12 41.4
Solyc09g061350.1.1 Tomato cytosol 27.78 41.28
KRH32032 Soybean mitochondrion 32.1 40.62
Zm00001d027742_P001 Maize cytosol 39.51 39.51
TraesCS4B01G276100.1 Wheat cytosol 37.04 39.47
TraesCS4A01G030000.1 Wheat cytosol 36.42 38.82
TraesCS4D01G274600.1 Wheat cytosol 36.42 38.82
Os03t0159900-01 Rice cytosol 37.65 37.65
EER92826 Sorghum cytosol 38.89 37.28
Solyc09g061510.1.1 Tomato cytosol 20.99 36.56
Solyc06g054150.1.1 Tomato extracellular, golgi, mitochondrion, plastid 44.44 35.12
HORVU4Hr1G073230.1 Barley plastid 38.89 23.33
Protein Annotations
EnsemblPlants:Solyc09g065370.1.1EnsemblPlantsGene:Solyc09g065370.1InterPro:A-crystallin/Hsp20_domInterPro:IPR002068PANTHER:PTHR33879PANTHER:PTHR33879:SF4
PFscan:PS01031SEG:segUniParc:UPI000276C719UniProt:K4CUG4MapMan:35.2:
Description
No Description!
Coordinates
chr9:-:63468616..63469104
Molecular Weight (calculated)
17982.3 Da
IEP (calculated)
4.416
GRAVY (calculated)
-0.243
Length
162 amino acids
Sequence
(BLAST)
001: MKVHPVPRKR NITLRCDIVS ALSQANSLTG RQKKLRRLPH IFAKVLELPF NSDADVSIEE TSDSFRFVIP TDDAGNNIRA DTVEIYPGVT KIVIRGDNVL
101: DSSLGEFELD LWRFRLPPST LPELATADFA DGELVVTVPK DPDEEEVDDD GIGEAGRLIL VQ
Best Arabidopsis Sequence Match ( AT4G14830.1 )
(BLAST)
001: MKIHPLPRNE NNNNLIHHAR DPTREPGKKL RRLPHIFSRV LELPLKSDAD VAVEESHDCF RFVAETDGGG GGGVRAYMVE IHPGVTKILV RTNGSSSLGL
101: SLDELELDVW RFRLPESTRP ELVTVDCDGD GELIVTVPKI EDNGRDLIVL VQ
Arabidopsis Description
HSP1HSP1 [Source:UniProtKB/TrEMBL;Acc:A0A178V4A0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.