Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 5
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G259800.1 | Wheat | mitochondrion | 96.47 | 96.47 |
| Zm00001d018908_P001 | Maize | mitochondrion | 70.59 | 71.01 |
| Os07t0173100-00 | Rice | mitochondrion | 68.82 | 68.42 |
| Zm00001d007836_P001 | Maize | mitochondrion | 68.24 | 68.24 |
| EER95920 | Sorghum | mitochondrion | 70.59 | 67.8 |
| OQU90686 | Sorghum | cytosol, mitochondrion | 54.12 | 58.6 |
| GSMUA_Achr9P25740_001 | Banana | mitochondrion | 55.29 | 58.39 |
| GSMUA_Achr9P10550_001 | Banana | mitochondrion | 57.65 | 56.0 |
| Solyc09g065370.1.1 | Tomato | mitochondrion | 46.47 | 48.77 |
| PGSC0003DMT400049751 | Potato | mitochondrion | 46.47 | 48.77 |
| AT4G14830.1 | Thale cress | cytosol | 43.53 | 48.68 |
| PGSC0003DMT400051869 | Potato | plastid | 40.0 | 46.26 |
| Solyc06g084220.1.1 | Tomato | plastid | 38.24 | 44.83 |
| PGSC0003DMT400075166 | Potato | cytosol | 35.29 | 44.12 |
| KRH77848 | Soybean | mitochondrion | 35.29 | 43.48 |
| VIT_07s0151g00830.t01 | Wine grape | cytosol | 42.35 | 43.37 |
| KRG91317 | Soybean | endoplasmic reticulum, extracellular | 49.41 | 43.3 |
| PGSC0003DMT400042036 | Potato | cytosol | 42.35 | 42.86 |
| KRH35512 | Soybean | endoplasmic reticulum, extracellular | 48.82 | 42.78 |
| Bra023821.1-P | Field mustard | cytosol | 40.59 | 42.59 |
| CDY34247 | Canola | cytosol | 40.59 | 42.59 |
| PGSC0003DMT400034952 | Potato | cytosol | 37.06 | 42.57 |
| CDX98212 | Canola | mitochondrion | 40.59 | 42.33 |
| KRH71407 | Soybean | mitochondrion | 33.53 | 41.01 |
| Solyc09g082150.1.1 | Tomato | cytosol | 25.88 | 40.37 |
| TraesCS4D01G274600.1 | Wheat | cytosol | 35.88 | 40.13 |
| PGSC0003DMT400082124 | Potato | cytosol, mitochondrion | 43.53 | 39.36 |
| Bra039959.1-P | Field mustard | extracellular | 43.53 | 38.54 |
| AT3G22530.1 | Thale cress | endoplasmic reticulum, extracellular | 44.71 | 38.38 |
| CDY10651 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 42.94 | 37.24 |
| Solyc09g061350.1.1 | Tomato | cytosol | 23.53 | 36.7 |
| CDY10290 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 41.76 | 36.22 |
| KRH32032 | Soybean | mitochondrion | 27.06 | 35.94 |
| Solyc06g054150.1.1 | Tomato | extracellular, golgi, mitochondrion, plastid | 40.59 | 33.66 |
| VIT_05s0020g03610.t01 | Wine grape | cytosol | 47.65 | 33.61 |
| Solyc09g061510.1.1 | Tomato | cytosol | 16.47 | 30.11 |
| KRH55262 | Soybean | cytosol, plasma membrane, plastid | 30.59 | 30.06 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G246400.1 | EnsemblPlantsGene:TraesCS2D01G246400 | PANTHER:PTHR33879 | PANTHER:PTHR33879:SF3 | SEG:seg | TIGR:cd06464 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr2D:+:287237161..287237673
Molecular Weight (calculated)
17787.3 Da
IEP (calculated)
6.934
GRAVY (calculated)
0.064
Length
170 amino acids
Sequence
(BLAST)
(BLAST)
001: MRVHPAPRKR TIAVQRCAAA ALSAAGGAKK LRRLSHIFAK VLELPFAADA DVAVEEDAAE LRFVAATEGF SPGGACAHAL EIHPGVTKVV VRDLSTGIGA
101: DDRTATFELD RWRFRLPPCT RPTMATATYA EGELIVTVPK GAVPDEGDGN ADGAAILGGS GAERVLVFVQ
101: DDRTATFELD RWRFRLPPCT RPTMATATYA EGELIVTVPK GAVPDEGDGN ADGAAILGGS GAERVLVFVQ
001: MILIPVKIQS LFSYLLLLNL IQSIDKPNPE AMRVHPIPRN INNTLIHHHH HNPTREPGKN LRRLPHIFNR VLELPLRSEA DVAVEERHDC FRFVAETVGL
101: CNGDGEMRAY MVEIHPGITK IVVRTNGSSS LGLSLDELEL DVWRFRLPES TRPELVTVAC VDGDLIVTVP KNAEEEDDDG GGGDFGQGIG SGRLVLVQ
101: CNGDGEMRAY MVEIHPGITK IVVRTNGSSS LGLSLDELEL DVWRFRLPES TRPELVTVAC VDGDLIVTVP KNAEEEDDDG GGGDFGQGIG SGRLVLVQ
Arabidopsis Description
Heat shock protein [Source:UniProtKB/TrEMBL;Acc:Q8VY73]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.