Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- extracellular 5
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH35512 | Soybean | endoplasmic reticulum, extracellular | 96.39 | 96.39 |
| KRH55262 | Soybean | cytosol, plasma membrane, plastid | 55.67 | 62.43 |
| AT4G14830.1 | Thale cress | cytosol | 48.45 | 61.84 |
| Bra023821.1-P | Field mustard | cytosol | 47.42 | 56.79 |
| CDY34247 | Canola | cytosol | 47.42 | 56.79 |
| GSMUA_Achr9P25740_001 | Banana | mitochondrion | 46.91 | 56.52 |
| CDX98212 | Canola | mitochondrion | 47.42 | 56.44 |
| PGSC0003DMT400034952 | Potato | cytosol | 42.78 | 56.08 |
| PGSC0003DMT400075166 | Potato | cytosol | 38.14 | 54.41 |
| KRH77848 | Soybean | mitochondrion | 37.63 | 52.9 |
| AT3G22530.1 | Thale cress | endoplasmic reticulum, extracellular | 53.61 | 52.53 |
| PGSC0003DMT400082124 | Potato | cytosol, mitochondrion | 50.52 | 52.13 |
| GSMUA_Achr9P10550_001 | Banana | mitochondrion | 46.91 | 52.0 |
| Bra039959.1-P | Field mustard | extracellular | 51.03 | 51.56 |
| PGSC0003DMT400042036 | Potato | cytosol | 43.81 | 50.6 |
| Solyc09g082150.1.1 | Tomato | cytosol | 28.35 | 50.46 |
| TraesCS2B01G259800.1 | Wheat | mitochondrion | 43.81 | 50.0 |
| CDY10651 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 50.52 | 50.0 |
| Solyc09g061350.1.1 | Tomato | cytosol | 27.84 | 49.54 |
| CDY10290 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 50.0 | 49.49 |
| TraesCS2D01G246400.1 | Wheat | mitochondrion | 43.3 | 49.41 |
| Os07t0173100-00 | Rice | mitochondrion | 43.3 | 49.12 |
| Zm00001d027742_P001 | Maize | cytosol | 39.18 | 46.91 |
| Zm00001d018908_P001 | Maize | mitochondrion | 40.72 | 46.75 |
| Zm00001d007836_P001 | Maize | mitochondrion | 40.72 | 46.47 |
| Os03t0159900-01 | Rice | cytosol | 38.66 | 46.3 |
| Solyc09g061510.1.1 | Tomato | cytosol | 22.16 | 46.24 |
| TraesCS4A01G030000.1 | Wheat | cytosol | 36.08 | 46.05 |
| TraesCS4B01G276100.1 | Wheat | cytosol | 36.08 | 46.05 |
| TraesCS4D01G274600.1 | Wheat | cytosol | 36.08 | 46.05 |
| EER95920 | Sorghum | mitochondrion | 41.75 | 45.76 |
| EER92826 | Sorghum | cytosol | 39.69 | 45.56 |
| KRH71407 | Soybean | mitochondrion | 32.47 | 45.32 |
| VIT_05s0020g03610.t01 | Wine grape | cytosol | 55.15 | 44.4 |
| Solyc06g054150.1.1 | Tomato | extracellular, golgi, mitochondrion, plastid | 43.3 | 40.98 |
| OQU90686 | Sorghum | cytosol, mitochondrion | 32.99 | 40.76 |
| KRH32032 | Soybean | mitochondrion | 24.23 | 36.72 |
| HORVU4Hr1G073230.1 | Barley | plastid | 37.11 | 26.67 |
Protein Annotations
| EMBL:ACUP02012676 | EnsemblPlants:KRG91317 | EnsemblPlantsGene:GLYMA_20G147400 | EntrezGene:100808440 | PANTHER:PTHR33879 | PANTHER:PTHR33879:SF3 |
| ProteinID:KRG91317 | ProteinID:KRG91317.1 | SEG:seg | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI000233DDBB |
| UniProt:I1NGG3 | MapMan:35.2 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr20:+:38596450..38599241
Molecular Weight (calculated)
21078.6 Da
IEP (calculated)
5.313
GRAVY (calculated)
0.057
Length
194 amino acids
Sequence
(BLAST)
(BLAST)
001: MIEKVPLVII AVLILVVQSS AAFHGINRIM KVHPVPRKRN ISIQFGGDGG NPMSEAQALL GIAGKKLRRL PHVFSCVLEL PFRSDADVAV EEAPDCFRFV
101: AETDGIGDVR AHTVEIHPGV TKIVVRDGGS VELSLDQLEL DMWRFRLPES TRPELASAVF VDGELIVTVP KGHEEENDGD GDRGMGGGRL VLVQ
101: AETDGIGDVR AHTVEIHPGV TKIVVRDGGS VELSLDQLEL DMWRFRLPES TRPELASAVF VDGELIVTVP KGHEEENDGD GDRGMGGGRL VLVQ
001: MILIPVKIQS LFSYLLLLNL IQSIDKPNPE AMRVHPIPRN INNTLIHHHH HNPTREPGKN LRRLPHIFNR VLELPLRSEA DVAVEERHDC FRFVAETVGL
101: CNGDGEMRAY MVEIHPGITK IVVRTNGSSS LGLSLDELEL DVWRFRLPES TRPELVTVAC VDGDLIVTVP KNAEEEDDDG GGGDFGQGIG SGRLVLVQ
101: CNGDGEMRAY MVEIHPGITK IVVRTNGSSS LGLSLDELEL DVWRFRLPES TRPELVTVAC VDGDLIVTVP KNAEEEDDDG GGGDFGQGIG SGRLVLVQ
Arabidopsis Description
Heat shock protein [Source:UniProtKB/TrEMBL;Acc:Q8VY73]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.