Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 3
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Solyc06g065380.2.1 | |
| Solyc11g018610.1.1 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc09g061510.1.1 | Tomato | cytosol | 47.71 | 55.91 |
| PGSC0003DMT400075166 | Potato | cytosol | 64.22 | 51.47 |
| Solyc06g054150.1.1 | Tomato | extracellular, golgi, mitochondrion, plastid | 66.97 | 35.61 |
| AT4G14830.1 | Thale cress | cytosol | 46.79 | 33.55 |
| Solyc09g082150.1.1 | Tomato | cytosol | 33.03 | 33.03 |
| KRH77848 | Soybean | mitochondrion | 40.37 | 31.88 |
| CDY34247 | Canola | cytosol | 45.87 | 30.86 |
| CDX98212 | Canola | mitochondrion | 45.87 | 30.67 |
| Bra023821.1-P | Field mustard | cytosol | 44.95 | 30.25 |
| Solyc06g084220.1.1 | Tomato | plastid | 39.45 | 29.66 |
| KRH35512 | Soybean | endoplasmic reticulum, extracellular | 50.46 | 28.35 |
| GSMUA_Achr9P25740_001 | Banana | mitochondrion | 41.28 | 27.95 |
| KRG91317 | Soybean | endoplasmic reticulum, extracellular | 49.54 | 27.84 |
| Solyc09g065370.1.1 | Tomato | mitochondrion | 41.28 | 27.78 |
| AT3G22530.1 | Thale cress | endoplasmic reticulum, extracellular | 49.54 | 27.27 |
| Bra039959.1-P | Field mustard | extracellular | 45.87 | 26.04 |
| CDY10651 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 45.87 | 25.51 |
| GSMUA_Achr9P10550_001 | Banana | mitochondrion | 40.37 | 25.14 |
| TraesCS4B01G276100.1 | Wheat | cytosol | 34.86 | 25.0 |
| OQU90686 | Sorghum | cytosol, mitochondrion | 35.78 | 24.84 |
| CDY10290 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 44.04 | 24.49 |
| TraesCS4A01G030000.1 | Wheat | cytosol | 33.95 | 24.34 |
| TraesCS4D01G274600.1 | Wheat | cytosol | 33.95 | 24.34 |
| TraesCS2B01G259800.1 | Wheat | mitochondrion | 37.61 | 24.12 |
| Os07t0173100-00 | Rice | mitochondrion | 37.61 | 23.98 |
| EER95920 | Sorghum | mitochondrion | 38.53 | 23.73 |
| Zm00001d018908_P001 | Maize | mitochondrion | 36.7 | 23.67 |
| TraesCS2D01G246400.1 | Wheat | mitochondrion | 36.7 | 23.53 |
| Zm00001d007836_P001 | Maize | mitochondrion | 35.78 | 22.94 |
| Os03t0159900-01 | Rice | cytosol | 33.95 | 22.84 |
| Zm00001d027742_P001 | Maize | cytosol | 33.95 | 22.84 |
| KRH55262 | Soybean | cytosol, plasma membrane, plastid | 35.78 | 22.54 |
| EER92826 | Sorghum | cytosol | 34.86 | 22.49 |
| VIT_05s0020g03610.t01 | Wine grape | cytosol | 46.79 | 21.16 |
| HORVU4Hr1G073230.1 | Barley | plastid | 36.7 | 14.81 |
Protein Annotations
| EnsemblPlants:Solyc09g061350.1.1 | EnsemblPlantsGene:Solyc09g061350.1 | PANTHER:PTHR33879 | PANTHER:PTHR33879:SF3 | UniParc:UPI000276BB40 | UniProt:K4CTW8 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr9:+:58933152..58933481
Molecular Weight (calculated)
12494.0 Da
IEP (calculated)
4.625
GRAVY (calculated)
-0.263
Length
109 amino acids
Sequence
(BLAST)
(BLAST)
001: MKNLSRLPHI FNYFQELPFR SNEDVAVEEK EVFFRFMEKI KLEGSGDGQV RTLEVEIHPA GLRKIVVKKG NAAGEDENEL NVDTYWRYIL TASTMPELAA
101: VVFVDGDLM
101: VVFVDGDLM
001: MILIPVKIQS LFSYLLLLNL IQSIDKPNPE AMRVHPIPRN INNTLIHHHH HNPTREPGKN LRRLPHIFNR VLELPLRSEA DVAVEERHDC FRFVAETVGL
101: CNGDGEMRAY MVEIHPGITK IVVRTNGSSS LGLSLDELEL DVWRFRLPES TRPELVTVAC VDGDLIVTVP KNAEEEDDDG GGGDFGQGIG SGRLVLVQ
101: CNGDGEMRAY MVEIHPGITK IVVRTNGSSS LGLSLDELEL DVWRFRLPES TRPELVTVAC VDGDLIVTVP KNAEEEDDDG GGGDFGQGIG SGRLVLVQ
Arabidopsis Description
Heat shock protein [Source:UniProtKB/TrEMBL;Acc:Q8VY73]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.