CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG91803
KRH34983
KRH34984

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G22530.1	KRG91803	AT1G35670.1	19130088
AT3G22530.1	KRH34983	AT1G35670.1	19130088
AT3G22530.1	KRH34984	AT1G35670.1	19130088
AT3G22530.1	KRG91803	AT4G09570.1	19130088
AT3G22530.1	KRH34983	AT4G09570.1	19130088
AT3G22530.1	KRH34984	AT4G09570.1	19130088
AT4G14830.1	KRG91803	AT1G35670.1	19130088
AT4G14830.1	KRH34983	AT1G35670.1	19130088
AT4G14830.1	KRH34984	AT1G35670.1	19130088
AT4G14830.1	KRG91803	AT4G09570.1	19130088
AT4G14830.1	KRH34983	AT4G09570.1	19130088
AT4G14830.1	KRH34984	AT4G09570.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT4G14830.1	Thale cress	cytosol	49.28	44.74
PGSC0003DMT400075166	Potato	cytosol	43.48	44.12
PGSC0003DMT400034952	Potato	cytosol	43.48	40.54
Solyc09g061350.1.1	Tomato	cytosol	31.88	40.37
KRH71407	Soybean	mitochondrion	40.58	40.29
GSMUA_Achr9P25740_001	Banana	mitochondrion	46.38	39.75
PGSC0003DMT400042036	Potato	cytosol	47.83	39.29
CDX98212	Canola	mitochondrion	46.38	39.26
Bra023821.1-P	Field mustard	cytosol	45.65	38.89
CDY34247	Canola	cytosol	45.65	38.89
Zm00001d027742_P001	Maize	cytosol	44.93	38.27
Os07t0173100-00	Rice	mitochondrion	47.1	38.01
Zm00001d007836_P001	Maize	mitochondrion	46.38	37.65
KRG91317	Soybean	endoplasmic reticulum, extracellular	52.9	37.63
OQU90686	Sorghum	cytosol, mitochondrion	42.75	37.58
Zm00001d018908_P001	Maize	mitochondrion	45.65	37.28
KRH35512	Soybean	endoplasmic reticulum, extracellular	52.17	37.11
EER92826	Sorghum	cytosol	44.93	36.69
Os03t0159900-01	Rice	cytosol	42.75	36.42
EER95920	Sorghum	mitochondrion	46.38	36.16
GSMUA_Achr9P10550_001	Banana	mitochondrion	45.65	36.0
TraesCS2B01G259800.1	Wheat	mitochondrion	44.2	35.88
Solyc09g082150.1.1	Tomato	cytosol	28.26	35.78
TraesCS2D01G246400.1	Wheat	mitochondrion	43.48	35.29
PGSC0003DMT400082124	Potato	cytosol, mitochondrion	47.83	35.11
Solyc09g061510.1.1	Tomato	cytosol	23.19	34.41
TraesCS4D01G274600.1	Wheat	cytosol	37.68	34.21
TraesCS4A01G030000.1	Wheat	cytosol	37.68	34.21
KRH32032	Soybean	mitochondrion	31.16	33.59
TraesCS4B01G276100.1	Wheat	cytosol	36.96	33.55
Solyc06g054150.1.1	Tomato	extracellular, golgi, mitochondrion, plastid	48.55	32.68
Bra039959.1-P	Field mustard	extracellular	44.2	31.77
AT3G22530.1	Thale cress	endoplasmic reticulum, extracellular	44.93	31.31
CDY10651	Canola	endoplasmic reticulum, extracellular, plasma membrane	44.2	31.12
CDY10290	Canola	endoplasmic reticulum, extracellular, plasma membrane	43.48	30.61
KRH55262	Soybean	cytosol, plasma membrane, plastid	35.51	28.32
VIT_05s0020g03610.t01	Wine grape	cytosol	49.28	28.22
HORVU4Hr1G073230.1	Barley	plastid	42.03	21.48

Protein Annotations

EMBL:ACUP02000685	EnsemblPlants:KRH77848	EnsemblPlantsGene:GLYMA_01G237300	EntrezGene:100807115	PANTHER:PTHR33879	PANTHER:PTHR33879:SF3
ProteinID:KRH77848	ProteinID:KRH77848.1	UniParc:UPI0002337A0F	UniProt:I1JAT0	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr1:+:56231808..56232568

Molecular Weight (calculated)

15106.3 Da

IEP (calculated)

8.535

GRAVY (calculated)

0.083

Length

138 amino acids

Sequence
(BLAST)

001: MARKRKPLWG LSTKKLGRLP HVFSRVLQLP FPADTDVSVQ EAPHCFRFVA ESPAAGQVEA HIVEIHPGVT KVVVRETGST ALNDLHLDVW RIRLPESTRP
101: ELATAVLAAG ELVVTVPKTQ DVWAAVPSFC SIATNLHC

Best Arabidopsis Sequence Match ( AT4G14830.1 )
(BLAST)

001: MKIHPLPRNE NNNNLIHHAR DPTREPGKKL RRLPHIFSRV LELPLKSDAD VAVEESHDCF RFVAETDGGG GGGVRAYMVE IHPGVTKILV RTNGSSSLGL
101: SLDELELDVW RFRLPESTRP ELVTVDCDGD GELIVTVPKI EDNGRDLIVL VQ

Arabidopsis Description

HSP1HSP1 [Source:UniProtKB/TrEMBL;Acc:A0A178V4A0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.